Genetics Flashcards
Genes
hereditary units of DNA transmitted from one gen to another
code for proteins
locus
specific location of a gene on a chromosome
alleles
different versions of a gene
humans have 2 alleles for each autosomal gene
Chromosomes
structure composed of genes located in nucleus of cell
-chromosomes can be distinguished from ea. other by overall length and position of centromere (divides chromosome into 2 arms of varying length)
homologous chromosomes
have the same genes at the same loci
one maternal + one paternal
genome
genetic info contained in the cells, ont he chromosomesfor a particular species
Number of chromosomes in a human
46 (23 pairs)
Number of chromosomes in a garden pea
14
Number of chromosomes in a fruit fly
8
Mutation
a change in some part of the DNA code
- can be spontaneous or induced by exposure to mutagenic chemicals or radiation
- varying effects depending on where in the gene code mutation occured
- net result= may change physical appearance or alter some other train
autosome
any chromosome that isnt a sex chromosome (humans have 22 paris)
allosome pair=sex chrom pair
chromosome number
Somatic cells contain one set of chromosomes from female parent and one homologous set from male parent
- Homologous chromosomes are similar in size, structure, and gene composition
- Humans have 22 pairs of autosomes, and 1 pair of sex chromosomes (allosomes) for 23 total pairs in each cell
haploid number
n= 23
number of chromosomes in sex cells/gametes
diploid nunber
2n=46
total number of chromosomes in somatic cells
which is the short arm of the chromosome?
p= short arm
which is the long arm of the chromosome?
q
how are chromosomes numbered?
numbered consecutively according to length beginning with longest chromosome first
exception= sex chromosome
Automsomes
somatic chromosomes
all except sex chromosomes
allosomes
sex chromosomes
what determines maleness?
genetic factors on the Y
males have one morphologically dissimilar pair of chromosomes
Karyotype
picture of persons chromosomes
mitosis
one exact cope of ea chromosome made and distributed through the division of original cell–> 2 daughter cells
Meiosis
- The process by which gamete cells are produced (egg and sperm)
- Resulting gametes have 23 new chromosomes (one member of each of the pairs), with new combos of the original maternal and paternal copies
- Occurs only in specialized germ cells of gonads
-2 consecutive cell divisions producing cells with half the original chromosome number
diploid 2n—>haploid n
oogenesis
diploid primordial cells in ovaries become oogonia
=1 haploid ovum (n) and polar bodies, which degenerate
spermatogenesis
diploid primordial cells in testes become spermatogenia
=4 sperm cells (spermatozoa)–> ea haploid (n)
genotype
all of the alleles of an organism
phenotype
measurable trait an organism has
-result of gene products that interact in a given enviro
Patterns of inheritance
Describe how disease is transmitted in families
-The patterns help predict the risk for relatives
Patterns of inheritance- what are single gene disorders
-Single gene disorders (Mendelian disorders)
Classified by whether they are
Autosomal or x-linked
Dominant or recessive pattern
punnett square
illustrates monofactorial cross- mating where single gene is analyzed
-demonstrates mendels principle of segregation: one parent has 2 copies of a gene for ea trait, but transmits only one via a gamete
codominance
when 2 alleles for a trait are equally expressed (ex: AB blood type)
-When alleles lack complete dominant and recessive relationships and are both observed phenotypically (expressed at same time)
ex: roan cow, checkerd chickens
what type of inheritance is AB blood type?
codominance
incomplete dominance
heterozygotes have phenotypes that have both alleles visible as a blend (one allele isn’t expressed over the other)
Makes a third phenotype that’s a blending of the two
Human examples: wavy hair – it’s a blend that’s seen when a person with straight hair has a child with a person with curly hair;
-another ex: skin color
penetrance
the probability that individuals in a population who have a particular gene combination will show the condition
Example: if a mutation causing diabetes has 95% penetrance, 95% of people with the mutation combo will develop diabetes
genetic marker
Sequence of DNA with a known location on a chromosome
expression
the components of the phenotype that are exhibited in an individual
Example: myotonic muscular dystrophy
Phenotype may include myotonia, cataracts, narcolepsy, balding, infertility
–>2 people carrying this gene may express it differently
anticipation
Genetic diseases that increase in severity or have earlier onset with each successive generation
Examples: Fragile X, Huntington, myotonic muscular dystrophy
Chromosomal abnormalities: most common type
-can be numerical or structural
most common= aneuploidy (abnormal number)
Chromosomal abnormalities: balanced chromosomal abnormalities
no net loss or gain of chromosomal material
Balanced translocation or inversion
Chromosomal abnormalities: balanced chromosomal abnormalities–> Balanced translocation
rupture of a chromosome resulting in the pieces “re-sticking” in the wrong combinations
Chromosomal abnormalities: balanced chromosomal abnormalities–>inversion
a chromosome piece is lifted out, turned around, and reinserted
Chromosomal abnormalities: balanced chromosomal abnormalities–> Unbalanced chromosomal abormalities
additional or missing info
deletion or insertion
Unbalanced chromosomal abnormalities- unbalanced translocation
Tends to arise as an offspring of a balanced carrier
ex: Robertsonian translocation
Robertsonian translocation
ex of unbalanced translocation
- involve 2 chromosomes
- They are all acrocentric (centromeres are close to the end)
- Results in formation of a “new” chromosome
- The bigger chromosome can produce an unbalanced gamete
- Those involving chromosome 21 can produce gametes with 2 copies; upon fertilization, can produce Trisomy 21
Why use 3 generation pedigree
- Provides a concise visual tool
- Multifactorial genetic conditions now require that treatment and prevention measures be highly individualized
- PCP is at front line playing integral role in prevention and treatment of genetically based diseases
- genetic testing is more available to patients
- Many diseases with genetic links have been discovered and clarified
CONS of software pedigree programs
Many software pedigree programs available are actually less user friendly than drawing it out – harder to record nuances such as multiple relationships, > 3 generations, and tracking multiple diseases
Function of the 3 generation pedigree
- Making a diagnosis
- Deciding on testing strategies
- Establishing the pattern of inheritance
- Identifying people at risk
- Educating the patient
- Determining reproductive options
Purpose of 3 generation pedigree
- Genetic family history recorded in shorthand form
- How members are related to each other from generation to generation
- Graphic representation of medical family history using symbols
- Provides medical information and relationship information at a glance
Pedigree Standardization Task Force of the National Society of Genetics Counselors
Established in 1995, updated in 2008
standard pedigree language
Male -square
Female – circle
Diagonal line through symbol – deceased
Shaded symbol – affected with trait
Half-shaded symbol – carrier of trait
Relationship – line between individuals
Sibship – horizontal line showing siblings
Line of descent – line showing offspring
Individual line – attaches to sibship line
Two hash marks – divorced or separated (or no longer in a relationship)
siblings on a pedigree
draw siblings in birth order from left to right
includ either age or birth year
each gen goes on the same horizontal plane
Research pedigree
generations are given a roman numeral
-individuals given a number (1,2,3)
Clinical pedigree
Names recorded next to individual’s line
Surname recorded above sibship or relationship line
Initials often used
Autosomal dominant
65% of human monogenic disorders
- mutation in a single allele can cause dz
ex: Huntington’s Disease
affected= Hh or HH
Characteristics of Autosomal dominant
- Vertical pattern
- Multiple generations affected
- Variable expressivity
- Affected individuals in same family may show varying degrees of phenotypic expression (severity) - Reduced penetrance
Some with the genetic mutation may not show phenotype, making it appear that it “skipped” a generation - Males and females affected equally
- Male to male transmission can be seen
Autosomal recessive
25% of human monogenic disorders
Tends to involve enzymes or receptors
Rare
Males and females equally affected
Horizontal inheritance
-Multiple affected offspring
Often occurs in the context of consanguinity (blood related)
Heterozygous carriers of a defective allele are usually clinically normal
Example:
Cystic fibrosis
Characteristics of autosomal recessive
Horizontal pattern
Single generation affected
Males and females affected equally
Inheritance is from both parents, each being a heterozygote/carrier
Each offspring has a 25% chance of being affected, and a 50% chance of being a carrier
Higher association with consanguity (blood relative)
X-linked
5% of human monogenic disorders
Risk of developing disease due to a mutant x
chromosome differs between the sexes
Males are hemizygous (heterozygous) for mutant allele on the x
The terms “x-linked dominant” and “x-linked recessive” therefore only apply to females
Heterozygous females usually normal or mild
Who is more likely to develop a mutant phenotype in x-linked disorders?
Men
Males are hemizygous (heterozygous) for mutant allele on the x
More likely to develop a mutant phenotype regardless if the mutation is dominant or recessive
Who does “x-linked dominant” and “x-linked recessive” apply to?
Females only!
What is not possible in x-linked disorders?
No male to male transmission is possible
Males and x-linked disorders
No male to male transmission is possible
Unaffected males do not transmit the phenotype
All daughters of an affected male are heterozygous carriers
Males usually more severely affected than females
Examples of x-linked dominant disorders
Alport’s Syndrome
Fragile X Syndrome
Examples of x-linked recessive disorders
Wiskott-Aldrich Syndrome
Duchenne muscular dystrophy
Multifactorial/Complex disease
Caused by interactions of variations in multiple genes and environmental factors
Genetic susceptibility genes
–>These genes make a person susceptible to a disorder, and certain environmental factors trigger the susceptibility
Examples of Multifactorial/Complex disease
Cancer Diabetes Asthma Heart disease Mental illness Cleft lip/cleft palate
Multifactorial/Complex disease- cancer
Sporadic inheritance of a cancer vs. inherited cancer syndrome for which a genetic test may be available (ex: BRCA)
- Sporadic cancer is more likely
- Most cancer is NOT inherited, but the predisposition to cancer IS inherited (ie BRCA)
The pedigree can help the clinician make more cost-effective, appropriate choices in genetic testing
-Determine who needs to be tested first, and who else needs to be tested
Down syndrome
Trisomy 21- gamete has 2 copies of chromosome 21 (leads to trisomy when fertilized)
Most common chromosomal abnormality in live births
Most common non-lethal trisomy
Prenatal testing for Down Syndrome
- Quad screen (maternal serum AFP, estriol, hCG, inhibin-alpha)
- Nuchal translucency