Genetics Flashcards
Start vs Stop Codons
“U Go Away, U Are Away, U Are Gone”
AUG (MET)
UGA, UAA, UAG
Process of protein synthesis key points
Initiation
Elongation
Termination
Initiation:
–> eIF id 5’cap & assemble 40S, eIF’s release & 60S is assembled with ATP (Chraging) & GTP (Translocation)
Elongation:
–> Aminoacyl-tRNA binds A site & rRNA catalyzes growing peptide bond + adds peptides
–> Ribosome moves 3 nucleotides to 3’ end or mRNA bringing the tRNA to P site
Termination:
–> eRF’s id stops codon & stop translation, the finished polypeptide is released (via GTP) from E site
APE of protein synthesis
A: Aminoacyl-tRNA
P: Peptide grows
E: Empty tRNA Exits
Shine-Daigarno sequence
A prokaryotic ribosomal binding site that aligns ribosomes to a start codon
Which bacteria target eIFs in protein synthesis via bacterial endo/exotoxins to interfere with protein formation?
Diptheria & Pseudomonas
Post Translational Modification
Trimming
Covalent alteration
Chaperone
Trimming:
–> Remove N or C terminal peptides to make a mature protein
Covalent Alt:
–> Phosphorylation, Hydroxylation, Glycosylation, methylation, acetylation, & ubiquitination
Chaperone:
–> Intracellular proteins to facilitate/maintain protein folding/denaturation (heat shock proteins in yeast)
Ex. Cystic fibrosis
Cell types:
Permanent
Stable/Quiescent
Labile
Perm:
Stuck in G0 (neurons, skeletal, cardiac, RBC)
S/Q:
Can go from G1–>G0 ( Hepato, lympho cytes, PCT, Periosteal cells)
Labile:
Always dividing ( Bone marrow, gut epi, skin/hair/germ cells)
Cell cycle
&
Regulators (3)
Reg:
Cyclin-dep kinases
Cyclin-CPK complexes (Phosphorylate Rb)
Tumour suppressors (P53)
Cell Trafficking (RER—> Golgi) processes
COPS I&II Function
“2 steps forward, 1 step back”
COPII –Anterograde–> Cis Golgi –> Trans golgi–> Lysosomes (destroyed) OR plasma membrane (via LDL receptors)
RER
VS.
SER
What’s made & gen characteristics?
RER:
Secretory hormone synthesis
N-linked oligosaccharide addition to lysosomal proteins
Nissle bodies to make peptide neurotransmitters
SER:
Steroid hormone synthesis
Detox site
Has Glu-6-phosphatase (glycogenolysis/gluconeogenesis)
O-Oligosaccharides functions (3)
- N-oligosaccharide on asparagine
- Adding O-oligosaccharide on serine+threonine
- Adding Mannose-6-phosphate to proteins
Lysosomal Storage disorders: AR
Lysosomal enzyme deficiency accumulation of abnormal metabolic products.
I cell disease
Fabrys
Gauchers
Krabes
Metachromatic leukodystrophy
Nieman Picks
Tay Sachs
Peroxisome associated disorders
Zellweger syndrome
Refsum disease
Adrenolenkodystrophy
I-Cell disease
Def N-acetylglucoasminyl-1-phosphotransferase reduces mannos-6-phosphaste
Lysosomes lack enzymes to break shit down causing a build-up of debris & high levels of lysosomal enzymes in the blood
Signs:
Coarse facial hair
Gingival hyper plasia
Corneal clouding
Claw hand
Kyphosis
Fatal in childhood
Zellweger syndrome
AUTO REC
Mutated PEX genes
Signs:
Hypotonia
Seizures
Hepatosplenomegaly
Early death
Refsum disease
AUTO REC
Def a-oxidation & high phytanic acid
Signs:
Scaly skin
Ataxia
Cataracts/Night blindness
Short 4th toe
Epiphyseal displacement
Rx Diet + plasmapheresis
Adrenoleukodystrophy
X-linked
Mutated ABCD1 gene =
Disordered B-oxidation causing high levels of very-long-chain fatty acids in adrenals
Signs:
White (leuko) matter in brain & testes
Adrenal crisis
Progressive loss of neurological function
Death
Cytoskeleton features
Microfilaments
Intermediate filaments
Microtubes
Microfil:
–> Muscle contraction, cytokinesis, actin, & microvilli
Int:
–> Cell structure, vimentin, desmin, & laminins,
Microtubules:
–> Movement (cilia, flagella, mitotic spindle) & axonal trafficking centrioles
Dynein vs Kinesin
“REaDY? AttacK!”
“Negative Near Nucleus, Positive Points to Periphery)
Retrograde + —> - via dynein
Anterograde - —> + - via kinesin
Which bacteria/viruses (3) use dynein for retrograde transport to the neuronal cell body?
C. tetani, Poliovirus, & HSV
Medications that act upon microtubules
“Microtubes Get Constructed Very Terribly”
Mebendazole (anthelminthic)
Griseofulrin (antifungal)
Colchicine (anti-gout)
Vinca alkaloids (anti-cancer)
Taxanes (anti-cancer)
What type of cellular junction allows coordinated ciliary movement?
Gap junctions
Kartagener syndrome
“Kylie Jenner can’t shake ass”
AUTO REC
Dynein arm defect = immobile cilia
Signs:
Developmental delays
Hearing loss
Recurrent infections
Infertility
Sodium-potassium pump works by moving.
What cardio glycosides directly inhibit the NA/K pump, thereby indirectly increasing heart contractility
2 K+ in
3 Na out
Digitoxin & Digoxin