Genetic Alterations Flashcards

1
Q

X-linked dominant

A
  • Described a dominant trait or disorder caused by a mutation in a gene on the X chromosome
  • Both males and females express the phenotype, although, although males affected tend to have a more severe phenotype
  • Only one affected X chromosome is required to cause the disease
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
2
Q

Examples of X-linked dominant disease

A
  • Fragile X syndrome
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
3
Q

What is the probability pf transmitting an X-linked dominant gene mutation through the mother (female)?

A
  • 50% probability for each child regardless of gender
  • 50% affected and 50% unaffected
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
4
Q

What is the probability pf transmitting an X-linked dominant gene mutation through the father (male)?

A
  • 50% are affected (ALL FEMALES)
  • 50% are unaffected (ALL MALES)
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
5
Q

X-linked dominant gene mutation from an affected male to his offspring VS

X-linked dominant gene mutation from an affected female to her offspring

A
  • Affected male to his offspring: All of his daughters and none of his sons will inherit the mutation
  • Affected female to her offspring: Each child, regardless of gender, has a 50% chance of inheriting this mutation
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
6
Q

X-linked recessive

A
  • A mode of inheritance in which a mutation in a gene on the X chromosome causes the phenotype to be expressed in males who are hemizygous for the gene mutation (i.e., they only have one X chromosome) and in females who are homozygous for the gene mutation (i.e., they have a copy of the gene mutation on each of their two X chromosomes)
  • Males only require one mutated X chromosome (since they only have one X chromosome, to begin with) in order to cause the disease
    • Phenotype expressed in males only
    • Affected males are always related to each other through females. MALE –> TO MALE TRANSMISSION DOES NOT OCCUR
  • Females are less likely to have an x-linked recessive disorder because they have two X chromosomes
    • If females do inherit it, it will most likely be less severe
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
7
Q

Examples of X-linked recessive disorders

A
  1. Hemophilia
  2. Fabry disease
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
8
Q

Autosomal Dominant

A
  • Describes a trait/disorder in which the phenotype is expressed in those who have inherited only one copy of a particular gene mutation (heterozygotes)
  • Specifically refers to a gene on one of the 22 pairs of autosomes (non-sex chromosomes)
    • Only one copy of the abnormal gene
    • Not sex linked
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
9
Q

What is the chance of passing on an autosomal dominant disorder from parent to offspring?

A
  • Each offspring has a 50% chance of inheriting it
  • Son and daughters of an affected parent are equally likely to inherit and transmit the disorder
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
10
Q

Examples of autosomal dominant disorders

A
  1. Huntington disease
  2. Marfan syndrome
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
11
Q

Autosomal Recessive

A
  • Describes a trait/disorder requiring the presence of two copies of a gene mutation at a particular locus in order to express the observable phenotype
  • Refers to genes on one of the 22 pairs of autosomes (non-sex chromosomes)
  • Needs two copies of the mutation for an offspring to exhibit the phenotype
    • Generally seen in a single generation of a family
    • Each offspring has a 25% chance of inheriting it
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
12
Q

Examples of autosomal recessive disorders

A
  1. Cystic fibrosis
  2. Sickle cell disease
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
13
Q

What is the probability of transmitting an autosomal recessive gene mutation to an offspring if one parent carries the mutation?

A
  • 50% are carriers
  • 50% are non-carriers
  • NO ONE SHOWS!
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
14
Q

What is the probability of transmitting an autosomal recessive gene mutation to an offspring if both parents carry the mutation?

A
  • 25% are noncarriers and 50% are carriers } (unaffected)
  • 25% are homozygotes for the mutation (affected)
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
15
Q

What is the probability of transmitting an autosomal recessive gene mutation to an offspring if one parent is affected and one parent is a carrier of the mutation?

A
  • 50% are carriers (unaffected)
  • 50% are homozygotes for the mutation (affected)
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
16
Q

Identify 7 disorders/diseases with a strong familial history

A
  1. CAD
  2. Stroke
  3. HTN
  4. Cancer
  5. Diabetes
  6. Pulmonary conditions
  7. Mental Illness
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
17
Q

What increases an individual’s genetic susceptibility to developing CAD?

A
  • Two or more closed relatives with CAD
  • Female relatives with CAD
  • Presence of related disorders such as diabetes in a close relative
  • Presence of multiple established/emerging risk factors in close family members
  • Early-onset of CAD ( <55 for men, <65 for women)
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
18
Q

What two common genetic variants or single-nucleotide polymorphisms (SNPs) were consistently associated with total stroke (all types) and ischemic stroke in white individuals?

A
  • Located on chromosome 12p13 near the gene NINj2, which encode ninjurin 2
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
19
Q

What is GINA and how is it related to genetic discrimination?

A
  • Stands for Genetic Information Non-Discrimination Act
  • A federal law passed in 2008
  • Prohibits discrimination in employment and health insurance coverage based on genetics
  • Prohibits insurance companies from requesting/requiring genetic information of an individual or their family, or using genetic information for decisions regarding coverage, rates, or preexisting conditions
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
20
Q

What is one thing GINA does not do?

A
  • It does not extend to:
    • Life insurance
    • Disability insurance
    • Long0term care insurance
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
21
Q

What does a patient need to be aware of before they order a genetic test?

A
  • Patients need to be aware that they need to have purchased forms of insurance (life, disability, long-term care) prior to genetic testing
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
22
Q

Mutations in BRCA 1 and BRCA 2 genes are associated with what?

A
  • Hereditary breast and ovarian cancer
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
23
Q

When BRCA 1 and BRCA 2 genes are functioning normally, what do they act as?

A
  • They both act as tumor suppressor genes
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
24
Q

On what chromosomes do BRCA 1 and BRCA 2 mutations occur?

A
  • BRCA 1 occurs on chromosome 17
  • BRCA 2 occurs on chromosome 13
25
Q

How are the mutations for HFE inherited?

A
  • They are inherited in an autosomal recessive manner
26
Q

What is HFE associated hereditary hemochromatosis (HFE-HH) and what are the signs and symptoms?

A
  • A condition in which there is high absorption of iron from the intestinal mucosa
  • Signs/Symptoms:
    • Excessive storage of iron in the liver, skin, pancreas, heart, joints, and testes
    • Abdominal pain
    • Weakness
    • Lethargy
    • Weight loss
27
Q

What are the two most common mutations associated with HFE-HH and on which chromosome are they located?

A
  • p. Cys282T yr and p.His63Asp yr
    • An individual can be homozygous for the p. Cys282 T yr mutation (greater risk for iron overload)OR
    • A compound heterozygote for both mutations ( p. Cys282T yr and p.His63Asp yr)
  • They are located on chromosome 6
28
Q

At what age do symptoms usually occur for HFE-HH?

A
  • Between the ages of 40 to 60 years
29
Q

What is a major complication of HFE and what can worsen it?

A
  • Liver cirrhosis –> Individuals treated prior to the onset of cirrhosis have a normal life span
  • Alcohol consumption can worsen symptoms
30
Q

What is the recommended treatment for HFE-HH?

A
  • Weekly periodic phlebotomy until serum ferritin levels are 50ng/ml or lower
31
Q

Is there genetic testing available for “normal” ( age of onset >60 years and not associated with an extensive family hx of AD) AD?

A
  • There is no current genetic testing available for “normal” AD
    • The association of the APOE e4 allele with AD is insignificant
32
Q

What is familial AD (FAD)?

A
  • FAD characterizes families that have more than one member with AD and usually implies multiple affected persons in more than one generation
33
Q

What does early-onset FAD (EOFAD) refer to?

A
  • EOFAD refers to families in which the onset is consistently before the age of 60 to 65 years and often before the age of 55 years
34
Q

What percentage of early-onset AD is familial and what percentage is inherited in an autosomal dominant manner?

A
  • Approximately 60% of early-onset AD is familial
  • Approximately 13% is inherited in an autosomal dominant manner
35
Q

What are the three types of early-onset AD?

A
  1. AD1
  2. AD3
  3. AD4
36
Q

AD1 is caused by mutations on what gene located on what chromosome?

A
  • Caused by mutations in APP located on chromosome 21
37
Q

AD3 is caused by mutations on what gene located on what chromosome?

A
  • Caused by mutations in PSEN1 gene located on chromosome 14
38
Q

AD4 is caused by mutations on what gene located on what chromosome?

A
  • Caused by mutations in PSEN2 located on chromosome 1
39
Q

What type of genetic testing is available for the three types of early-onset AD?

A
  • Molecular genetic testing is available for the three types of early-onset AD (AD1, AD3, AD4)
  • There is NO treatment however
40
Q

What is genomics?

A
  • The study not just of single genes but of the functions and interactions of many genes in the genome.
41
Q

How does the study of genomics affect healthcare?

A
  • Understanding how variations in an individual’s DNA may affect disease and health is the focus of genomic medicine. This knowledge can lead to:
    • Innovative ways to diagnose disease
    • Earlier detection, by identifying genetic predisposition to a particular disease
    • New approaches to treatment
    • Development of designer drugs that target a mutation or its products (pharmacogenomics)
42
Q

What is penetrance?

A
  • The proportion of individuals with a mutation causing a particular disorder who exhibit clinical symptoms of that disorder
  • Most often refers to autosomal dominant conditions
  • A greater penetrance means that it is more likely an offspring will have it
43
Q

How do you calculate penetrance?

A

Number of individuals with clinical features (Nclinical)

——————​——————​——————​——————​——X 100 = Penetrance

Number of individuals with a disease-causing mutation (Nmutation)

44
Q

What does complete penetrance refer to?

A
  • Refers to clinical symptoms being present in all individuals who have the disease-causing mutation
45
Q

What does incomplete penetrance refer to?

A
  • Refers to clinical symptoms not being present in all individuals who have the disease-causing mutation
46
Q

What does consanguinity refer to?

A
  • Refers to genetic relatedness between individuals descended from at least one common ancestor –> Incest
    • Can decrease genetic variability
    • Increases risk for mutations
47
Q

What does anticipation refer to?

A
  • Refers to the tendency in certain genetic disorders for individuals in successive generations to present at an earlier age and/or with more severe manifestations
48
Q

Anticipation is often observed in disorders resulting from what?

A
  • Often is observed in disorders resulting from the expression of a trinucleotide repeat mutation that tends to increase in size and have a more significant effect when passed from one generation to the next
    • Example: Huntington Disease
49
Q

Genotype VS phenotype?

A
  • Genotype: Refers to the genetic makeup/composition
  • Phenotype: The observable physical/biochemical characteristics of the expression of a gene; the clinical presentation of an individual with a particular genotype
50
Q

What are predictive and pre-symptomatic genetic tests?

A
  • Used to find gene changes that increase a person’s likelihood of developing diseases in asymptomatic individuals with a family history of a genetic disorder and a potential risk of eventually developing the disorder
51
Q

What are the two types of predictive testing?

A
  1. Presymptomatic testing
  2. Predispositional testing
52
Q

What is presymptomatic testing?

A
  • Refers to testing of an asymptomatic individual in whom the discovery of a gene mutation indicates certain development of findings related to a specific diagnosis at some future point
    • A negative result excludes the diagnosis –> Means NO mutation was found
    • Mutation found –> Means individual will develop disorder at a future point
53
Q

What is predispositional testing?

A
  • Refers to testing an asymptomatic individual in whom the discovery of a gene mutation indicates the eventual development of findings related to a specific diagnosis is likely, but not certain
  • Mutation confers susceptibility
    • Mutation found –> Higher risk of developing disorder but not 100%
    • Mutation NOT found –> Lower risk of developing disorder but not 0%
54
Q

What does carrier testing used for?

A
  • Used to find people who “carry” a change in a gene that is linked to a disease
  • Usually offered to people who have a family history of a specific inherited disease or who belong to certain ethnic groups that have a higher risk of specific inherited diseases
55
Q

What type of gene mutations is carrier testing used for?

A
  • Used for autosomal recessive gene mutations
56
Q

What is pharmacogenomic testing used for?

A
  • Provides information about how certain medications are processed by an individual’s body
  • Helps providers choose medicines that work best for an individual’s genetic makeup
57
Q

What is diagnostic testing?

A
  • Testing used to confirm or exclude a known or suspected genetic disorder in a symptomatic individual or, prenatally, in a fetus at risk for a certain genetic condition
58
Q

Define epigenetics

A
  • Processes that modulate how a given set of genomic information gives rise to a phenotype
  • Refers to the area outside of the gene area
  • Environment has an impact on this