Fungal and sepsis Flashcards

1
Q

Mycoses

A

Structure: Eukaryotes
Metabolism: aerobes
Environ: slightly acidic environment- soil, geographically endemic in areas
Reproduction: fungi of medical interest= asexually by forming conidia

Types of infections fungi:
Yeasts- single cells and asexual budding
Molds- hyphae and a mat (mycelium)

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2
Q

Epidemiology

A

many infxn goes undiagnosed
No public health surveillance for:
common fungal - ringworm or vaginal candidiasis
serious fungal- aspergillosis and cryptococcosis

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3
Q

Fungal morphology

A
  1. Blastoconidia and pseudohyphae- candida
  2. chlamydospores- candida
  3. arthrospores- coccidioides
  4. sporangia and sporangiospores- mucor
  5. microconidia- aspergillus
  6. microconidia and macroconidia- microsporum

familiar dont mem

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4
Q

fungi vs bacteria

A

fungi:
Eukaryotic
cellwall= chitin and Beta glucan- caspofungin target
sterols in cell membrane- amphotericin B and azole target
sexual and asexual spores
Organic carbon for metabolism

Bacteria:
Prokaryotic
cellwall= peptidoglycan
sterols absent
endospores for survival not repro
many dont require organic carbon

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5
Q

Pathogenesis

A
  1. low virulence- opportunists in immunocomprom
  2. Adherence- adhere and colonization and virulence
  3. Invasion- mechanical breaks in skin with enzymes, small size allows for penetration of airways, live and multiply w/in macrophages
  4. Dimorphism-change shape to more invasive form
  5. tissue injury/destruction- from inflammatory response of host
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6
Q

dimorphism in yeast

A

yeast<->pseudohyphae<-> hyphae

budding vs hyyphae

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7
Q

Immunity

A

1st line defense: skin, fatty acids in skin, hormonal environment
Innate immunity: Neutrophils, macrophages, PRRs/PAMPs, some live in macrophages until activated by cytokines from Th1 cells
Adaptive: T cell mediated is most important, deficiencies lead to systemic progressive dx in immunocomprom

summary:
intact barrier defenses stop
neut and macro do a good job killing
fungi escape by growing in macro
th1 cellular imm activat macrophages via cytokines to clear infxn
need Cell mediated response

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8
Q

Manifestations of fungal disease

A

3 kinds:
1. mycotic infxn- opportunistic
2. mycotoxicosis- ingested toxins
* Ergotism- grain contam by mold= Nvd seizures
* Alflatoxin- aspergillus contam grain and peanuts
3. Allergy- asthmatic rxn

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9
Q

classifying Mycotic infxn: consider the source

A

Acquisition:
Exogenous- airborne, cutaneous-> acquired from environ, inhaled conidia, injxn past skin
Endogenous- colonization or reactivation from latent-> normal flora- trauma, invasion of mucosa, imbalance of flora

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10
Q

classifying: Where is it

A
  • superficial: infxn limited to stratum corneum-> Black piedra, white piedra, pityriasis versicolor, tinea nigra
  • Cutaneous: corneum or deeper, integument, appendages, hair nail-> Dermatophytoses, Dermatomycoses
  • Subcutaneous: subcutaneous tissues-> Chromoblastomycosis, Mycetoma, Sporotrichosis
  • Deep: lungs, abdominal viscera, bones, CNS-> primary systemic or opportunistic systemic
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11
Q

classifying: how aggressive is it?

A

Type of virulence:
Primary: infection in immunologically normal host- higher virulence, access via respiratory tract, asym or mild
Opportunistic: requires some compromise of host defense- take advantage, invade via resp, gi tract, intravascular devices

SYSTEMIC MYCOSES: affect whole body, immunosuppression is common-> “overwhelming inoculum”

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12
Q

Systemic Mycoses due to Primary pathogens

A
  • inhalation of virulent spores
  • Geo regions significant
  • immunocomp increases risk for widespread infxn

EX:
1. Blastomycosis
2. Coccidioidomycosis
3. Cryptococcosis- opportunistic
4. Histoplasmosis- OHIO River Valley

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13
Q

Systemic mycoses Opportunistic pathogens

A
  1. Candida albicans- cadidiasis
  2. Aspergillus fumigatus- site of indwelling catheter

Others:
Pneumocystis jirovecii- pneumocystosis= lung colonizer, HIV CD4<200, SPORADIC DX IN IMMUNODEF NEONATES
Zygomycetes- transplant pts

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14
Q

Testing

A
  1. Direct examination- 10% KOH, H&E stains, Silver stains
  2. Culture- selective media to grow
  3. NAAT- dna probes
  4. Serology-> Direct ag detection= immunoassays or Antibody detection= serum abs
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15
Q

Dermatophytes: keratin eaters

ring worm

A
  1. Epidermophyton
  2. Trichophyton
  3. Microsporum

Transmission: Human contact
Sxs:
skin= erythema, induration, itching, sclaing
hair= itchy scalp and hair loss
nails= thickened and dislodged from nailbed

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16
Q

Tinea (Pityriasis) Versicolor

Malassezia furfur

A

component of skin microbiome
Affects: teens, ya, males over females
sxs: patches of hypo or hyperpigmentation on torso and upper arms
Wood’s lamp= yellow/orange fluorescence

not a dermatophyte

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17
Q

Wood’s lamp exam

A

Non specific
Most Trichophyton species= DONT FLUORO
Directions: skin should be clear w/out makeup, cream, deodorant, and not recently washed
Warm up lamp
darken surroundings
place 10-30 cm away from skin
painless and safe

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18
Q

Fluorescence pattern

Wood’s lamp

A

Tinea versicolor: yellowish or orange glow
Malassezia folliculitis: hair follicles bluish white
Tinea capitis: microsporum= blue green, trichophyton=dull blue to absent
Erythrasma: Corynebacteria- rash in skin folds = coral pink
Pseudomonas: hot tub folliculitis and wound infection= green
Acne: propionibacteria= orange red
Porphyria cutanea tarda= red-pink

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19
Q

Sporotrichosis

Sporothrix schenckii

A

mold form lives on plants, yeast for is on human tissue
Subcutaneous mycosis
Rose gardener’s disease- pricked by thorn deposits fungi
DX: fungal cultures
SXS: skin lesion begins as painless papule wks to months after inoculation-> papule slowly enlarges and ulcerates-> firm nodules develop along lymphatic drainage

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20
Q

Candida

c. albicans MC

A

Opportunistic infxn
C. auris emerging multidrug resistant candida:
serious threat, severe infxns, spread in healthy facilities

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21
Q

Candidiasis

common in babies

A

Thrush and Friends
immunosuppression in adults and mc babies
white caseous chees like plaque, loosely adherent to mucosal surface

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22
Q

Candidiasis in areas the sun dont shine

A
  1. Vulvaginal candidiasis-> think curd lik discharge around period time
  2. intertrigo- skin folds/wet, erythema and tenderness w/ satellite lesions= diaper rash “beefy red” inflammation w/ satellite lesions
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23
Q

Erythrasma

looks like candida intertrigo

A

Not fungus= Corynebacteria
often sign of type 2 diabetes

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24
Q

Aspergillus

A

4 presentations:
1. Aspergillus pneumonia- rapid progression, fever, cough, hemoptysis, resp failure
2. Disseminated aspergillosis- primary infxn immunocomp that dissem to any organ and cns
3. Allergic respiratory disease- spores potent allergens-> progressive inflammation
4. Aspergilloma- fungus balls form in lungs-> pulmonary scarring adn cavities from prior healed infxns

other manifest: range from dissem to direct invasion from site
cutaneous aspergillosis- skin
Aspergillus endophthalmitis- eye

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25
Pneumocystis jirovecii pneumonia
"yeast like"- inhalation colonizer of human airway **low virulence-> can cause lethal pneumonia immunocompro** * seen in **HIV** and sporadic **sick infants** * SXS gradual: * fever, **nonproductive cough, SOB esp DOE** * bilateral rales on exam * cxr shows symmetric "ground glass" pattern from hila outward * Hypoxia in 3-4 wks and death * DX: cysts in BAL washings
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Cryptococcus neoformans | cryptococcosis
MC Life threatening invasive fungal disease inhalation of pigeon bird droppings C. neoformans-> in hiv pts C. gattii-> less dx Pulmonary infection: * asymp * **pneumonia** * fever, cough, SOB, headache, night sweats Extrapulmonary infxn: CNS-> **meningitis** or skin-> subcutaneous nodules DX: serum cryptococcal ag
27
Coccidioidomycosis | coccidioides immitis
Southwest US- inhale spores **immunocomp-> mild flu like, no need to tx** **immunocompromised-> more severe pneumonia and disseminated dx** DX: skin test for CMI response SYNDROME OF SEVERE PNEUMONIA + ERYTHEMA NODOSUM + ARTHRALGIAS= "VALLEY FEVER"
28
Histoplasmosis | H. capsulatum
Endemic= OHIO/MISSISSIPPI RIVER VALEYS Acute sympt= flu like sxs Progressive pulmonary dx= **resembles TB- SPUTUM, WT LOSS, NIGHT SWEATS, LUNG CAVITIES** Disseminated dx- immunocomp- **painless ulcers on mucous membranes- involve CNS**
29
Blastomycosis | B. dermatitidis
**east central and Great lakes region** **landscapers and farmers high risk-> bc spores from moist soil** **immunocomp->w/ collagen vascular dx high risk** sequelae 1. Asymp/mild sxs-> self limiting w/ mild fever and cough 2. Acute or chronic pneumonia 3. Exrapulmonary/dissem dx-> any organ->**skin lesions mc**
30
Interface dermatitis (ID) reactions
**pruritic, eczematous dermatitis**- btwn epidermis and dermis away from actual starting place **MC causes: Dermatophyte (tinea) infxns of feet or stasis dermatitis** Not specific to fungi
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Sepsis and SIRS
#1 cause of death from infxn Focus on: 1. early recognition 2. timely assessment and follow up 3. prompt action and tx Organ failure is the primary cause of mortality
32
US sepsis figures
incidence increasing due to: * increased awareness and tracking * aging population * immunosuppression * antibiotic resistant infxn
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Mortality figures | sepsis
**systemic inflammatory response syndrome (SIRS): up to 7% of mortality figures** lowest risk-> UTI source HIghest risk-> GI, Lung, or unknown
34
General themes and definition | sepsis
**sepsis-> dysregulated host immune response to infection -> exists on a continuum** organ dysfunction- SOFA score-increased 2 or more points related to organ failure Sepsis= dynamic state-> frequent reassessment for changes
35
Continuum of sepsis
1. Early sepsis-> infxn or bacteremia-> SOFA and NEWS 2. Sepsis-> Life threatening organ dysfunction caused by dysreg host 3. Septic shock- circulatory, cellular, and metabolic abnormalities 4. MODS (multifunction organ dysfunction syndrome)- progressive organ dysfunction without homeostasis and intervention
36
Pathophys of sepsis
1. Binding of TLRs on surface of immune cells-> cascade signals 2. increased transcription of inflamm mediators 3. Proinflamm cyto incide direct cytopathic injury-> tissue injury 4. Nitric oxide released-> vasodilation-> ischemia and shock
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Pathophys of sepsis
1. Binding of TLRs on surface of immune cells-> cascade signals 2. increased transcription of inflamm mediators 3. Proinflamm cyto incide direct cytopathic injury-> tissue injury 4. Nitric oxide released-> vasodilation-> ischemia and shock
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Clinical sigs of sepsis
Alterations in vitals: * arterial hypotension-> systol 90, MAP <70, Temp >38.3 or <36, **tachycardia >90 bpm or tachypnea>20 bpm** * Sigs of end organ perfusion * **Decreased cap refil/cyanosis/mottling, atlered mental status, obtundation, Ileus**
38
Lab values that point to sepsis
* hyperglycemia- glucose>140 * arterial hypoxemia * acute oliguria- urine output<0.5 ml/kg/hour * creatinine over .05 * thrombocytopenia * hyperbilirubinema>4 * hyperlactatemia-> sign of acidosis-> sign of organ hypperfusion * Procalcitonin high
39
Procalcitonin (ProCT)
**Calcitonin**-from thyroid-> decreases Calcium by inhib clasts **Procalcitonin- not detectable in healthy individuals** Elevated plasma procalc-> **occurs when tissue control of calcitonin breaks down and ProCT secreted** * **bacterial sepsis triggers * severe localized bacterial infxn * major burns, severe trauma, acute multiorgan failure, major abdominal or cardiothoracic surgery** * medullary thyroid carcinoma Viral: block TNFalpha blocking the release of procalc
40
SOFA score
1.PaO2/FiO2 ratio- comparison btwn O2 level in blood and conc breathing 2.platelet count 3.bilirubin 4.hypotension 5.glasgow coma score 6.creatinine
41
qSOFA | quick assessment to get a rough idea of prognosis
1. tachypnia- greater than 22 RR 2. Altered mental status- GCS 15 or less 3. Hypotension- sbp less than 100 one point each: 0-1= not high risk 2-3= high risk
42
Risk factors of sepsis
#1= Pneumonia cause of sepsis icu admission recent hospitalization- pt tx with antibiotic bacteremia extremes of age immunosuppression- diabetes, HIV Malignancy CAP inappropriate antibiotic use especially broad spectrum genetic factors/innate immuno factors Covid 19 maternal/perinatal period trauma/burns
43
Nosocomial infection
RF: debillitated condition of pts, colonization of environ inpatient sepsis-> from skin contaminants with UTIS, CENTRAL LINES, MECHANICAL VENTILATION/PNEUMONIA G+ organisms increasing follow protocols for indwelling devices: 1. CLABSI- central lines replaced no more fre than every 4 days but no longer than 7 2. CAUTI-urinary catheter should be 3-8 days | cauti- catheter assoc uti Clabsi- central line assoc bloodstream infxn
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Sources of infection | sepsis
Cardiovascular- Endocarditis, myocarditis, injxn drug use HEENT- sore throat/pharyngitis LUNGS- CF SKIN- hospitalized pts
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Common bacteria imp in sepsis
- 1. E. coli- uti and prostatitis 2. Klebsiella pneumoniae- uti pneumonia 3. enterobacter species- uti 4. **pseudomonas aeruginosa- infected burns/pneumonia in CF/ ALL pts/diabetes- highest mortality rate** 5. Proteus mirabilis- utis 6. bacteroides fragilis- peritoneal infxn + 1.**streptococcus pneumoniae- pneumonia and meningitis-> MC cause of pneumonia and meningitis in adults** 2.streptococcus pyogenes- skin and soft tissue infection-> super antigen 3.staphylococcus aureus- skin and soft tissue infection-> superantigen 4.enterococcus species- utis
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Systemic inflammatory response syndrome | SIRS
INFXN - common cause RF: * extensive trauma, hemorrhage, burns * thromboembolism (PE) * anaphylaxis * MI/CABG/surgery * autoimmune * addison's disease all trigger dysregulated inflamm response ## Footnote DOES NOT MEAN THERE IS AN INFECTION
47
Clinical signs of SIRS
need 2 or more: 1. temp >38 or <36 2. heart rate >90 bpm 3. respiratory rate >20 bbp 4. WBC >12K
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Problems with SIRS criteria
emphasis on inflamm ocmponents without considering dysregulation-> many sxs are adaptive (fever, tach, wbcs) sepsis definition: **life threatening organ dysfunction caused by dysregulated response to infection (maladaptive)** ## Footnote TOO LOOSE
49
Sepsis- maladaption
Sepsis is a coagulation trigger-> release pro inflamm cytokines **increases PA-1: plasminogen activator**
49
Sepsis- maladaption
Sepsis is a coagulation trigger-> release pro inflamm cytokines **increases PA-1: plasminogen activator**
50
Disseminated intravascular coagulation (DIC) ## Footnote ALL PURPLE
1. release of tissue factor is critical-> bleeding more likely in acute DIC, thrombosis in CHRONIC 2. Clotting factors rapidly consumed 2ndary to: * infection * extensive trauma * malignancies * OB complications difficult to recognize until late stages consumptive of clotting factors lead to excessive bleeding-> shock, hypotension, increased vascular permeability excessive clotting- ischemia, impaired organ perfusion, end organ damage
51
Signs and symptoms of DIC
1. Clotting:**PE, DVT, MI, renal failure, ischemic stroke** 2. Bleeding: **petechiae, blood oozing, accumulation of blood in serous vacities, hematuria, hemorrhagic stroke**
52
Septic shock
* Circulatory, cellular, and metabolic abnormalities assoc w/ greater risk of mortality than with sepsis alone Clinically: * vasopressor requirement to maintain MAP greater than 65 * lactate level higher than 2 in abscence of hypovolemia Hospital mortality rates over 40% **sock and hypoxemia may result in transient tranaminitis**
53
Surviving sepsis
1 hour bundle: 1. measure lactate 2. obtain blood culture b4 ab 3. administer broad spec ab 4. rapid administration of cystalloid for hypotension 5. apply vasopressors if hypotensive
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Pediatric causes and tx | sepsis
Neonatal up to 3 months: Group B strep E. coli
55
further workup and tx
* fluids- crystalloids- maintain BP * pressors- norepinephrine to maintain BP * steroids-when fluids and pressors are insuff exept in peds * albumin- controversial
56
effects of Norepinephrine
BO= COxPR vasoconstriction increased renin increased chronotropic and ionotropic effects
57
Blood related products and glucose ## Footnote PR
PRBC for HB<7 Platelets <10,000 Enoxaparin if dvt considered glucose: insulin for BG>180 monitor frequently to ensure stability
58
Prevention of sepsis
* remove foreign bodies, drain abscesses, remove infected tissues * use ab prophylactic in pts with liquid tumors * topical agents prophylactic in burn pt * indwelling catheters should be properly cared for and frequently examined for the possibility of infection