fMRI Flashcards

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1
Q

Give three reasons why fMRI is well suited for studying the neural underpinnings of human behaviour.

A

It is non-invasive.
It can measure brain function over short periods of time to capture dynamic aspects of mental processes and behaviour.
It measure activity across the whole brain simultaneously to see how multiple brain regions interact to mediate complex behaviours.

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2
Q

Describe in one sentence how fMRI works.

A

It tracks brain function based on changes in local blood oxygen levels that occur in response to neural activity.

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3
Q

fMRI uses the magnetic properties of which atom and why?

A

Hydrogen atoms because they are the dominant source of protons in the body.

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4
Q

Protons intrinsically rotate around an axis. What does this give them?

A

Angular momentum and a magnetic dipole along the axis.

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5
Q

What is the direction of the dipole under normal conditions?

A

It is random for different protons.

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6
Q

Describe longitudinal magnetisation.

A

When placed in a strong external magnetic field, a subset of protons align with the direction of this field. The number of protons that align is proportional to the field strength.

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7
Q

What is the purpose of transmitting a radiofrequency (RF) pulse?

A

To measure the composition of tissue based on the aligned protons.

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8
Q

What happens to the protons when a radiofrequency (RF) pulse is transmitted?

A

It induces a weaker magnetic field perpendicular to the strong field.
This misaligns the protons with the strong field, which now acts as a torque, causing the proton spin axes to precess in an arc on the transverse plane.

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9
Q

What happens to protons that are tilted heavily into the transverse plane when a coil is placed nearby?

A

The spinning magnet induces a current in the wire that reverses as the poles alternate.

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10
Q

What is the function of the receiver head coil in an MRI machine?

A

It measures alternating current induced by protons precessing synchronously. Amount of current = concentration of precessing protons.

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11
Q

Describe longitudinal relaxation with time constant T1.

A

The spin orientation of protons gradually relaxes back to the direction of the strong magnetic field, causing them to precess less in the transverse plane and thus generate less signal.

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12
Q

Describe transverse relaxation with time constant T2.

A

This is a second type of decay that occurs while protons are still precessing in the transverse plane. Local interaction with other atoms causes some protons to precess faster or slower. Since they get increasingly out of sync, the induced current alternates less reliably and signal is lost.

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13
Q

What is the strength of the magnetic field in most modern MRI machines?

A

3T (Tesla).

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14
Q

What is the advantage of using a higher field strength, e.g. 7T?

A

Higher resolution imaging of cortical layers.

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15
Q

Which part of the MRI machine is called the bore?

A

The tunnel-like outside.

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16
Q

How is behaviour measured when a participant completes an experimental task in an MRI machine?

A

Manual responses with a button box and/or eye movements with an eye tracker.

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17
Q

What is T2*?

A

It is a time constant that refers to the signal decay from both local interactions and field distortions.

18
Q

What does EPI stand for?

A

Echo planar imaging.

19
Q

What is the EPI sequence?

A

The standard pulse sequence for measuring brain function.

20
Q

Give two reasons why EPI is desirable for fMRI.

A

It is extremely fast.
It is sensitive to T2*.

21
Q

What is the importance of T2*?

A

This is how MRI measures neural activity.

22
Q

Which three parameters of the EPI sequence need to be chosen when designed an fMRI study?

A

How many slices to acquire in the brain volume.
How much time per volume.
What voxel resolution to use.

23
Q

What is neurovascular coupling?

A

Active neurons consume energy obtained from oxygen in blood. When a brain area is active, blood oxygenation drops.
To replenish this, the flow of blood to the local area increases.
Supply exceeds demand, so there is a higher proportion of oxygenated blood in active brain areas.

24
Q

What does BOLD contrast stand for?

A

Blood oxygenation level-dependent contrast.

25
Q

Why does deoxygenated blood interact with the magnetic field while oxygenated blood does not?

A

In deoxygenated blood, the iron in haemoglobin is unbound.

26
Q

How does deoxygenated blood impact T2* decay and signal compared to oxygenated blood?

A

It causes faster T2* decay and reduces signal.

27
Q

What is the BOLD contrast?

A

The difference in signal produced by deoxygenated blood compared to oxygenated blood.

28
Q

Define attention.

A

A set of processes that are necessary to engage in any higher-order cognitive function.

29
Q

Name the four cerebral regions believed to be involved in spatial attention.

A

Posterior parietal cortex.
Limbic-cingulate gyrus.
Frontal cortex.
Reticular structures.

30
Q

What is the top-down attention system driven by?

A

Goal-driven.

31
Q

What is the bottom-up attention system driven by?

A

Stimulus-driven.

32
Q

Where is the top-down attention system centred?

A

Dorsal attention network (DAN).

33
Q

Which regions make up the DAN?

A

Dorsal frontal and posterior parietal cortices.

34
Q

Where is the bottom-up attention system centred?

A

Ventral attention network (VAN).

35
Q

Which regions make up the VAN?

A

Right hemisphere temporoparietal and ventral frontal cortex.

36
Q

Where is the DAN anchored?

A

In the intraparietal sulcus (IPS), frontal eye fields (FEF) and middle temporal complex (MT+).

37
Q

How does the DAN work?

A

Activity colocalises to regions of the DAN when focusing on an object or task, or re-orienting to goal-directed activity in the contralateral hemispace.

38
Q

Where is the VAN anchored?

A

In the right hemisphere temporoparietal junction (TPJ) and inferior frontal gyrus/middle frontal gyrus (IFG/MFG).

39
Q

How does the VAN work?

A

It serves as a circuit breaker to current cognitive activities in response to salient and potentially relevant external environmental stimuli.

40
Q

How do the DAN and VAN interact with each other?

A

The DAN sends top-down filtering signals to visual areas and the VAN modulates ventral activation in response to behaviourally important stimuli and coordinating stimulus-response selection.