Final Review Flashcards
Characteristics of living things
1: maintain internal order
2: capable of reproduction
3: capable of growth and development
4: energy use and metabolization
5: maintain homeostasis
6: respond to environment
7: capable of evolution
Vertical Evolution
-progression of changes in a lineage
-new species evolve from pre existing species by the accumulation of mutations that are filtered by natural selection
EXAMPLE: horse
Horizontal Gene Transfer
genetic exchange between different species, extremely rare.
EXAMPLE: antibiotic resistant bacteria
Binomial Nomenclature
- gives each species a unique scientific name
- (Genus)(Species)
- Both italicized, only Genus is capitalized
Genome
the complete genetic makeup of an organism. Genomics, analyzes DNA sequences
Proteome
Complete complement of proteins that a cell or organism can make. The genome carries info to make the proteome.
Steps of scientific method
- make observations
- form hypothesis
- design experiment
- record data
- analyze data
- draw conclusions
- make new hypothesis
Deductive Reasoning
General to specific
Inductive Reasoning
Specific to general
Control group
Untreated test subject used as benchmark
Experimental Group
a group of subjects that are exposed to the variable of a control experiment.
Independent Variable
manipulated by the investigator
what is being tested
Dependent Variable
Represents the result of the manipulation of the experimental variable.
what is being measured
Atoms
- smallest functional units of matter
- cannot be further broken down into other substances
- each specific type of element is a chemical element
- entire atom has no net electric charge
three subatomic particles and there charges
- protons(+)
- neutrons(0)
- electrons(-)
Isotopes
atoms of an element that differ in the number of neutrons they carry
How are electrons held in atoms
- electrons held in orbitals
- each orbital can hold only 2 electrons
- any atom with more than 2 electrons has more than 1 orbital
Covalent Bonds
- atoms share a pair of electrons
- occurs between atoms whose outer electron shells are not full
- strong chemical bonds because electrons behave as if they belong to each atom
Polar Covalent Bonds
-oxygen has higher electronegativity
-molecule has partial negative region and partial positive region
shared electrons spend more time near the oxygen atom
EXAMPLE: H2O
Nonpolar covalent
bonds between atoms with similar electronegativities, equal sharing of electrons
EXAMPLE:O2
Hydrogen Bonds
hydrogen atom (slight + charge) from one polar molecule is attracted to an electronegative atom.
- do not share electrons
- individually weak
- collectively strong bond
Ionic Bonds
complete transfer of electrons
-ions are formed when an atom loses or gains an electron
properties of water
- cohesion
- high heat of vaporization
- high heat capacity
- density and temperature
- solvent
cohesion
bonds between molecules stick together, responsible for surface tension and viscosity of water
Acids
dissolve in water and release hydrogen ions.
strong acids
almost completely dissociate HCL into H_ and cl-
weak acids
some of the acid does not dissociate
Bases
accept H+ in solutions
Isomers
Identical molecular formulas but different structures and characteristics
Structural Isomers
Contain the same atoms but in different bonding relationships
Cis-trans Isomers
contain the same atoms in different positions around double bonds
enantiomers
type of stereoisomer in which the molecules are mirror opposites
dehydration reaction
forms macromolecules by removing H2O
hydrolysis reaction
breaks polymers back down into monomers hy adding H2O
4 categories of carbs
- monosacharrides
- disaccharides
- oligosaccharides
- polysaccharides
monosaccharides
- simplest form of carbohydrate
- usually 5(pentose) or 6 carbon(hexose)
glucose
all living things contain glucose. Glucose is very soluble in water circulates in the blood or fluids of animals where it can be transported accross cell membranes. Once inside a cell enzymes can break down glucose into smaller molecules, releasing energy that was stored in the chemical bonds of glucose.
disaccharides
2 monosaccharides joined together by a dehydration reactin that forms what is called a glycosidic bond
polysaccharides
- giant polymers connected by glycosidic linkages
- sometimes used to store energy
- some provide structural roles (chitin)
Lipids
hydrophobic molecules composed mainly of hydrogen and carbon atoms.
triglycerides “fats”
formed by bonding glycerol to 3 fatty acids. Important for storing energy
Steroids
- four interconnected rings of carbon atoms
- not very water soluble
- hormones and vitamins
waxes
provide a barrier to water loss
saturated fats
when all carbons in a fatty acid contain covalent bonds
unsaturated fats
contain double bonds
Primary protein structure
- amino acid sequence
- determined by genes
secondary protein structure
- folding in repeating patterns
- either alpha helix or beta pleated sheets
tertiary protein structure
folding gives complex three dimensional shape
- caused by interaction of side chains
- random coils
quarternary protein structure
- made up of 2 or more polypeptides
- multimeric proteins
purines
- adenine
- guanine
pyrimidines
- thymine
- cytosine
- uracil
volume
determines the amount of chemical activity in a cell per unit volume
surface area
determines the amount of substances that can pass the cell boundary per unit time
Cytosol
region of eukaryotic cell outside the organelles but inside the plasma membrane. Includes everything inside the plasma membrane. Central coordinating region for many metabolic activities.
Cytoskeleton
structure: network of three different types of protein filaments, actin, intermediate, and microtubules
function: shape & support, movement, tracks for “motor proteins”
Nucleus
structure: contains a nucleolus where ribosomes are formed, and surrounded by a nuclear membrane. The nuclear membrane is a double layered endomembrane system. There is also a nuclear envelope consisting of two lipid bilayers that is perforated with nuclear pores
function: contains most DNA, DNA duplications
Ribosomes
sites of protein synthesis that can be found assembled in the nucleolus, free in cytoplasm, in mitochondria, bound to the ER, in chloroplasts. Made up of ribosomal RNA
Rough ER
studded with ribosomes. sorts and folds, inserts proteins into ER membrane, glycosylation.
Smooth ER
Lacks ribosomes, continuous with rough ER, function depends on cell type. detoxification, crb metabolism, calcium balance, synthesis and modification of lipids
Golgi Apparatus
structure: stack of 3-23 saccules, vesicles transport materials between stacks
function: sorting, processing, secretion
Lysosomes
specialized vesicles, phagocytosis, autophagy, destroy invaders, apoptosis, uses hydrolytic enzymes to break things down
Vacuoles
varied functions, central vauoles in plants, contractile vacuoles in plants, phagocytic vacuoles in white blood cells, store wastes and toxic compounds, store antocyanins (pigment)
Peroxisomes
structure: contain specific digestive enzymes including catalase
function: breakdown toxic hydrogen peroxide. Found in cells that breakdown large amounts of lipids, liver cells, germinating seeds
Plasma Membrane
structure: boundary between cell and extracellular environment.
function: membrane transport, cell signalling, cell adhesion, homeostasis
Mitochondria
structure: outer and inner membrane, intermembrane space, mitochondrial matrix, contain there own DNA
function: make ATP, divide by binary fission
Chloroplasts
photosynthesis
cell membrane
- bilayered dynamic structure
- forms boundaries between cells
- regulates movement of molecules into and out of cells
- made up of phospholipids, proteins & carbs
Membrane Lipid
- framework is the phospholipid bilayer
- phospholipids are ampipathic molecules
- hydrophobic region faces in
- hydrophilic region faces out
Cholesterol
- only found in animal cells
- stabilizes membranes at high temps
- makes more fluids at lower temps
integral membrane proteins
- intrinsic
- transmembrane proteins
- lipid-anchored proteins
peripheral membrane proteins
-extrinsic
-bound to regions of integral membrane proteins that project out from the membrane
or bound to polar head groups of phospholipids
membrane carbs
- glycosylation
- recognition signals for other cellular proteins
- cell surface recognition
- protective effects