FA Biochem III Flashcards
What fxn does glucokinase serve in the liver
phosphorylation excess glucose to sequester it, liver becomes blood glucose buffer
What are the reactants for glycolysis
glucose, 2Pi, 2ADP, 2NAD+
What are the products for glycolysis
2 pyruvate, 2ATP, 2NADH, 2H+, 2H2O
What two rxns in in glycolysis require ATP
glucose to G-6P, hexokinase and fructose-6P to fructose 1,6 BP phosphofructokinase-1
What substances inhibit phosphofructokinase-1
ATP, citrate
What substances induce phosphofructokinase
AMP, fructose 2,6 BP
What rxn creates ATP
phosphenolpyruvate to pyruvate catalyzed by pyruvate kinase
What inhibits pyruvate kinase
ATP and alanine
What induces pyruvate kinase
F16BP
What enzyme catalyzes the rxn from pyrvuate to Acetyl-CoA and what inhibits it
pyruvate dehydrogenase, ATP, NADH, acetyl-CoA
In which state is FBPase-2 active
fasting
In which state is PFK-2 active
fed
What regulates whether FBPase-2 or PFK-2 is active
protein kinase A
What is the pathway in the fasting state leading to inc FBPase-2 and dec PFK-2
inc glucagon, inc cAMP, inc PKA
What is the pathway in the fed state leading to dec FBPase-2 and inc PFK-2
inc insulin, dec cAMP, dec PKA
The pyruvate dehydorgenase complex serves in what reaction: reactants
pyruvate, NAD+, CoA
The pyruvate dehydrogenase complex serves in what reaction: products
Acetly-CoA, CO2, NADH
What co-factors are required for the pyruvated dehydrogenase complex
pyrophosphate (B1, thiamine, TPP) FAD (B2, riboflavin), NAD (B3, niacin), CoA (B5 pantothenate), lipoic acid
What activates the pyruvate dehydrogenase complex
exercise: inc NAD/NADH, inc ADP, inc Ca
What other complex is similar to the pyruvate dehydrogenase complex in that it has the same co-factors and generates succinyl-CoA
alpha-ketoglutarate dehydrogenase complex
What does arsenic do and what are th results of poisoning
inhibits lipoic acid, vomiting, rice water stools, garlic breath
What does a pyruvate dehydrogenase deficiency lead to and what are the findings
backup of substrate (pyruvate and alanine) resulting in lactic acidosis, congenital or acquired from thiamine def in EtOH, neuro defects
What is the TX for pyruvate dehydrogenase deficiency
inc intake of ketogenic nutrients, high in fact content or inc lysine or leucine
What are the only purely ketogenic amino acids
Lysine and leucine
Of the four possible fates for pyruvate, which one carries amino groups to liver from muscle
alanine
Of the four possible fates for pyruvate, which one can replenish TCA cycle or be used in gluconeogenesis
Oxalacetate
Of the four possible fates for pyruvate, which one is a transition from glycolysis to TCA cycle
Acetyl-CoA
Of the four possible fates for pyruvate, which ends anaerobic glycolysis as in RBCs, leukocytes, kidney medulla, lens, testes and cornea
Lactate
What does the TCA cycle produce per 1 acetyl CoA
3 NADH, 1 FADH2, 2 CO2, 1 GTP = 12 ATP (x2 per glucose)
What does Citrate Is Krebs starting substrate for making oxaloacetate
citrate, isocitrate, alpha ketoglutarate, succinyl-CoA, succinate, fumarate, malate, oxaleoacetate
How doe NADH electrons from glycolysis and the TCA cycle enter the mitochondiria
malate-aspartate shuttle or the glycerol 3 phosphate shuttle
What does the passage of electrons result in that when coupled to OXPHOS drives the production of ATP
proton gradient
Where are FADH2 electrons transferred to
comlex II
What substances directly inhibit electron transport chain
rotenone, CN-, antimycin A, CO
Wgat substances directly inhibit mitochondrial ATPase, causing an inc in proton gradient, no ATP because pump is stopped
oligomycin
What are uncoupling agents
inc permeability of membrane causing a dec in proton gradient and inc in O2 consumption - ATP synthesis stops, but electron transport continues to produce heat
What substances are uncouling agents
2,4 DNP, aspirin
What are the irreversible enzymes of gluconeogenesis
pyruvate carboxylase, PEP carboxykinase, fructose 1,6 biphosphatase, glucose 6 phosphatase
Where is pyruvate carboxylase found, what does it do, what does it require amd what activates it
in mitochondria, pyruvate to oxaloacetate, requires biotin, ATP, activated by acetyl coA
Where is PEP carboxykinase found, what does it do, and what does it require
in cytosol, oxaloacetate to phosphenolpyruvate, requires GTP
Where is fructose 1,6 bisphosphatase found and what does it do
cytosol, F 1,6 BP to fructose 6 Phosphate
Where is glucose 6 phosphatase found and what does it do
in ER, glucose 6-P to glucose
Where does gluconeogenesis primarily happen and what are other sites where the enzymes are located
liver, also in kidney and gut epithelium
What do def in in enzymes of gluconeogenesis cause
hypoglycemia
Why can’t muscle produce in gluconeogenesis
lacks glucose 6 phophatase
How do odd chain fatty acids participate in gluconeogenesis
via 1 proprionyl-CoA which can enter the TCA as succinyl-CoA and undergo gluconeogenesis
Why can’t even chain fatty acids produce new glucose
they yield only acetyl-CoA equivalents
What is the purpose of the HMP shunt
provide a source of NADPH from an abundantly available glucose 6P, create ribose for nucleotide synthesis and glycolytic intermediates
What are the 2 distinct phases of the HMP shunt and how many ATP are used and produced
oxidative and nonoxidative, no ATP produced or used
Which phase of the HMP shunt is reversible and which is irreversible
oxidative is irreversible
What happens on the oxidative arm of the HMP shunt and what is the key enzyme
glucose 6P to CO2, 2NADPH, ribulose 5P, G6PD, rate limiting step
What happens on the nonoxidative arm of the HMP shunt and what is the key enzyme and cofactor
ribulose 5P to ribose 5P, G3P and F6P, transketolase and B1
What does NADPH oxidase deficiency result in and why
chronic granulomatous disease, no respiatory burst, no formatino of ROS
What enzyme turns ROS to H2O2
superoxide dismutase
What enzyme adds Cl- to the H202 to makes bleach
myeloperoxidase
In what cells do the respiratory burst occur
PMNs
What substance inside the cell serves to oxidize glutatione
peroxide
What substance inside the cell reduces glutatione
NADPH
What substance inside the cells replenishes NADPH
G6PD
Patients with chronic granulomatous disease are at increased risk of infection from which kind of organisms
catalase positive (catalase neg produce H2O2 the cell can use) like S. aureus or aspergillus
What is NADPH’s role inside RBCs
keep glutathione reduced so it can detoxify free radicals and peroxides
What does a decrease in decrease in NADPH lead to and why
poor defense from oxidizing agents, fava beans, sulfonamides, primaquine, antituberclosis drugs leadig to hemolytic anemia.
What other inflammatory process can induce a hemolytic anemia in NADPH defieicnt patients
infection, free radicals generated by inflammatory response
Why is G6PD def more common among patients of african decent
protective against malaria
What are Heinz bodies
oxidized hemoglobin precipiated within RBCs
What are bite cells and when do you see them
result from phagocytic removal of heinz bodies my macs - G6PD def
benign asymptomatic condition with elevated levels of fructose in urine and blood, dz and enzyme
essential fructosuria - fructokinase AR
What is the defect in fructose intolerance and what does it cause
aldolase B, AR, fructose 1P accumulates causing a dec in availabel phosphate which inhibts glycogenolysis and gluconeogenesis leading to hypoglycemia, cirrhosis, jaundice and vomiting
What enzyme does fructose metabolism bypass to reach glycolysis
PFK - rate limiting enzyme
What are possilbe presentation for galactokinase def
failure to track objects or develop a social smile
What substance accumulates in galactokinase def and what is the clinical picture
galactitol, galactose appears in blood and urine, can cause infantile cataracta - AR
What enzyme results in classic galactosemia and what is the clinical
absence of galactose 1 phosphate uridyltransferase, accumulation of toxic substances leads to failure to thrive, jaundice, hepatomegaly, infantile cataracts, mental retardation
In addition to fructose and galactose, what sugards should be excluded from the diets of patients with disorders of fructose or galactose metabolism
sucrose = glucose + fructose, lactose = glucose + galactose
What is sorbitol, how and why is it made
alcohol version of glucose, can trap glucose in cell, aldose reductase
What sugar is sorbitol converted to and via what enzyme, and what can happen in cells lacking this enzyme
fructose via sorbitol dehydrogenase, inc sorbitol leading to osmotic damage as in cataracts, retinopathy, peripheral neuropathy as in diabetes
What tissues have both enzymes of sorbitol metabolism
liver, ovaries, seminal vesicles
What tissues have only aldose reductase
schwann cells, lens, retina, kidneys
What does lactase deficiency cause
loss of brush border enzyme causing bloating, cramps, osmotic diarrhea
Who typically has lactase def
African Americans and Asians