Extracellular Matrices Flashcards

1
Q

You are working in a lab to study different cells of the skin. You have isolated fibroblasts from healthy skin and wounded skin.

Why may you purchase collagen? (1) (1/5)

A
  • Fibre-forming molecule (structure to ECM by creating a complex 3D framework of rigid proteins)
  • Collagen = most prevalent fibre-forming protein (~77% of fat-free dry weight of human skin)
  • Defines the rigidity & elasticity of a T
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2
Q

You are working in a lab to study different cells of the skin. You have isolated fibroblasts from healthy skin and wounded skin.

Why may you purchase hyaluronan? (1) (2/5)

A
  • non fibre-forming molecule
  • funct to create a charged, dynamic & osmotically active space
  • fills majority of interstitial space
  • -ive charge & h.philic nature enables proteoglycans & GAGs to funct in: .. within T
    • hydration
    • buffering
    • force dispersion
  • key roles in fibrotic & wound-healing
  • ↑ XPS’ion of HA & HA-R (CD44) = associated w/ fibrotic diseases in many T
  • human oral fibro & fetal scarless wounds = ass w/ ↑ XPS’ion of HA
  • HA exerts FXs via CD44 & ‘receptor for HA-mediated motility’ (RHAMM) receptors
  • evidence that this large pericellular molecule can trap TGF-b1, close to fibro
    • = +ive FB autocrine loop that contributes to fibro → myofibroblast differentiation
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3
Q

You are working in a lab to study different cells of the skin. You have isolated fibroblasts from healthy skin and wounded skin.

What may you mix with hyaluronan? (1) (3/5)

A
  • HMW HA (>500 kDa) ass w/
    -↓ inflammation
    -↑ XPS’ion of collagen-III
    -↑activity of anti-fibrotic TGG-b3
  • fragmented HA (<400 kDa) ass w/
    -↑inflammation
    -↑↑ XPS’ion of collagen-III
    -↑fibro prolif
    -↑myofibro differentiation
  • controversial bc hexameric fragmented HA (~1 kDa)
    • improves fibro migration
    • promotes wound closure
    • decreases myofibro differentiation
    • decreases fibrosis
  • hexameric may be of interest in healing chronic wounds
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4
Q

You are working in a lab to study different cells of the skin. You have isolated fibroblasts from healthy skin and wounded skin.

Why may you purchase osteonectin? (1) (4/5)

A
  • aka SPARC
  • matricellular protein
  • group of secreted local proteins that interact in autocrine/paracrine cell-matrix sig
  • ≠ contribute to mechanical structure of ECM
  • unlike most ECM components that = omnipresent ↷ normal skin & repopulate wounded skin after predicted intervals, matricellular prot can be absent in healthy skin
    • XPS’d only after skin wounding
  • wound healing
    • fibro produce maj of ECM comp, wh/ act simultaneously to mod fibro funct
    • interaction of fibro:ECM = thought as autocrine reg that = crucial to wound-healing
    • fibro continuously create new ECM-P to heal cutaneous wounds, whilst being reg by prot of its own
    • SPARC = found @ ~2d post wound infliction
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5
Q

You are working in a lab to study different cells of the skin. You have isolated fibroblasts from healthy skin and wounded skin.

What may you mix with ostenoectin? (1) (5/5)

A
  • more osteonectin in wound healing fibro, rather than healthy
  • fibro grown on collagen-I showed ↑XPS’ion of Alpha_vBeta_3 integrin (binds to vitronectin/FN) & ↑XPS’ion of Alpha_2Beta_1 integrin (binds fibros to collagen, req for migration)
    • suggest that as an open would contracts & builds tension via tightening of collagen fibrils, myofibro transition away from collagen-mediated binding → non-collagen protein binding in wounds
    • collagen may not be necessary
    • in this case a non-collagen fibre-forming protein may be best to use, to still ensure mechanical stability i.e., VN/FN
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6
Q

What are the components of the ECM, and what are their functions?

Fibre-forming molecules (2) (1/3)

A

Collagen
Fibrin
Fibronectin
Vitronectin
Elastin
Fibrillin

  • structural element
  • tensile strength
  • cell adhesion reg
  • support chemotaxis & migration
  • directs T development
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7
Q

What are the components of the ECM, and what are their functions?

Non fibre-forming molecules (2) (2/3)

A

Proteoglycans (HA, decorin, versican, dermatopontin)
GAGs

  • hydration
  • swelling pressure to the T enabling it to withstand compressional forces
  • T homeostasis & struct
  • modulators of sig pathways, reg cellular processes
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8
Q

What are the components of the ECM, and what are their functions?

Matricellular proteins (2) (3/3)

A

Glycoproteins
- laminins: basement membrane
- integrins: receptors

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9
Q

You are working in a lab to study different cells of the skin. You have isolated fibroblasts from healthy skin and wounded skin.

What other factors may be considered? (1) (6/7) (stiffness)

A
  • mechanical prop of ECM have been shown to promote myofibro diff & lung fibrosis
  • matrix stiffness-induced myofibro diff, mediated by intrinsic mechanotransduction
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10
Q

You are working in a lab to study different cells of the skin. You have isolated fibroblasts from healthy skin and wounded skin.

What other factors may be considered? (1) (7/7) (laminin used)

A
  • L-a5 = observed to mod fibro prolif in fibrosis via disruption of the PI3K/Akt/mTOR sig pathway
    • downreg of L-a5 = observed to prevent activation of the sig pathway
  • PI3K = bridge b/w extra cellular sig & cellular responses
    • activated PI3K may promote the transformation of Akt, accelerating phos of downstream mTOR (inhibits cell apoptosis)
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11
Q

Describe the seven different functions of the ECM.

Anchorage, migration barrier/track, signal reservoir (3) (1/2)

A

Anchorage
- anchorage to the BM = essential for the maintenance of stem cells & establishment of polarity in many T

Migration barrier and track
- context-dependent
- ECM may serve as barrier to or facilitator of cell migration

Signal reservoir
- ECM binding to sig molecules prevents free diffusion
- facilitates establishment of conc gradients
- serves to create reservoir from which they can be liberated during matrix remodelling

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12
Q

Describe the seven different functions of the ECM.

Low affinity co-receptor, signal presenter, biochemical force (3) (2/2)

A

Low-affinity co-receptor
- ECM comp (e.g., heparan sulfate proteoglycans; HSPG) & ECM receptors (CD44) can bind signalling molecules & serve as co-receptors

Signal presenter
- SAME AS ABOVE
- inv in establishing [growth factor/cytokine] grad → reg their spatial and temporal bioavailability
- fibroblast growth factor family strongly binds to heparan sulfate chains of proteoglycans i.e., perlecan
- HSPG inv in binding, transporting & activation of developmental control factors (Wnt/HH)
- also acts in ligand maturation
- TGF-b = secreted in a latent form & stored in ECM
- activated by MMP-dep proteolysis

Biochemical force
- stiffness exerts profound influence on cells & reg their differentiation
- diff cells/T req diff stiffnesses to grow optimally i.e., bone = one of strongest ECM, neuronal cells grow in elastic modules of 50-209 Pa.

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13
Q

What are the different characteristics in the ECM b/w normal issue & wound healing / fibrotic tissue (4) (1/1)

A

Normal tissue:
- ECM consists of a basement membrane, interstitial (stromal) ECM
- BM = collagen IV, laminin, fibronectin & several types of proteoglycans
- Role: physical barrier b/w epi cells & connective T (stroma) of the organ, allows gaseous diff & transportation of sig molecules
- normal ECM = highly remodelled after initial set-down = exhibits T-specific composition & organisation

Fibrotic tissue:
- Cancer: rupture of BM permits EMT & migration of epi cells into surrounding stroma → invasion of interstitial ECM
- Epi cells undergoing EMT can activate stromal cells to become pro-tumorigenic, permitting remodelling of the ECM to make a tumour-permissive enviro
- ↑lvls of HA documented in cancer progression & = ass w/ poor prognosis & chemo-resistance
- HA induces EMT by binding CD44 & activating EMT TCF (TWIST-1)
- ↑[HA] has been shown to compromise vascular integrity - imp for metastasis (intravasation & extravasation)
- also shown to be involved in inflam resp that mediate ECM remodelling
- Dermoplasia: linear ECM fibres = observed to provide migratory tracks → cancer cells use to enhance migratory capability

Cell ECM interactions in both norm & fibrotic T are mediated by integrins
Integrins:
- reg CS organisation
- activate intracellular sig path to convey mechanical & chemical signalling

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14
Q

Why are fibroblasts important during wound healing? (5) (1/1)

A
  • pivotal role in reg ECM turnover under norm cond. ∴ in injured T they can be activated = elicit differentiation into myofibroblasts
  • they proliferate & chemotax to site of T injury
  • Myofibro function during wound healing by ↓size of wound & secreting ECM proteins that elicit appropriate immune resp
  • in normal tissue:
    • Fibro = stress-shielded by ECM & ≠ develop contractile feat or cell-matrix adhesions
  • in injured tissue:
    • inflam signals activate fibro to spread into provisional wound matrix → differentiation: TGF-β1 stim proto-myofibroblasts to XPS α-SMA & become differentiated
    • myofibros exit cycle when ECM = reconstituted & is able to compensate for the mechanical load (apoptosis when epithelialization completed)
    • fibro regulate their collagen & ECM protein syn in resp to mechanical tension:
      • ↑mech stress stretches fibros, ↑ing collagen production & ↓ing collagenese production
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15
Q

How is PDGF, IL6, IL13 & eicosanoid leukotrine signalling important in wound healing in fibroblasts? (6) (1/1)

A
  • Cytokines that promote inflammation & development of fibrotic resp.

PDGF
- produced platelets, endothelial cells, smooth muscle cells & macrophages
- acts on mesenchyme & fibroblasts → prolif, differentiation, & ECM production
- imp in wound healing, inflamm, angio, embryonic, fibrosis

IL13
- produced by mast & T-cells
- acts on many cells, inc fibro
- stim TGFβ prod & activation, collagen prod, MMP XPS’ion, fibro proliferation & myofibro differentiation
- TGFβ & other cytokines reg most common molecular mech (EMT) @ the heart of fibrosis

Eicosanoids
- induce fibroblast prolif & ECM production

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16
Q

How is paracrine signalling important in wound healing in fibroblasts? (7) (1/1)

A
  • Paracrine factors antagonise fibrosis i.e., Eicosanoids prostaglandin E2 (PGE_2) & prostacyclin (PGI_2)
  • important for reg - ≠ want XS ECM b/c can result in fibrotic diseases i.e., idiopathic pulmonary fibrosis
    • involves ↑ matrix stiffness via ↑ deposition of ECM = XS’ive ECM abundance in T microenviro
  • PGE_2: inhibits fibro proliferation & collagen prod
    • acts on GPC-EP receptors 1-4
      - obvs to inhibit fibro differentiation
17
Q

How and why is the ECM degraded during development & disease? (8) (1/1)

A
  • ECM = ↑ly dynamic struct, constantly subject to remodelling = ECM components are deposited, degraded, modified
  • abnormal ECM dynamics = dysregulated cell prolif, failure of cell death, loss of cell diff → congenital defect & pathological processes inc. T fibrosis & cancer
  • understanding = essential for therapeutic intervention (T engineering & regenerative medicines)
  • ECM high regulation is maintained by redundant mech that modulate XPS’ion & func of ECM modifying enzymes

Regulation by proteinases
- 2 main families of metalloproteases (MPs): MMPs and “disintegrin metalloproteases with thrombospondin motifs” (ADAMTS)
- MMPs
- ~23 memb
- self-inhibitory pro-domain @ N-T
- hemopexin @ C-T (suggested to facilitate binding to variety of prot & are zinc endopeptidases, inv in regulation b/c HX repeats in some matrixins can bind “Tissue Inhibitors of Metalloprotases” (TIMPs))
- catalytic domain & flexible hinge motif
- most have a basic 3-domain structure
- others (MMP2/9) have FN-type-2 repeats in their cata domain, mediating collagen binding
- MMP3/10 targets proteoglycans, FN & laminin
- MMP1 targets collagen-III
- MMP are often pleiotropic (many functions)

Disease examples
- Homeostasis of skin = fundamental for maint of struct, protective & reg functions
- dysregulation of this = disease i.e., atopic dermatitis, psoriasis, epidermolysis bullosa & skin cancer
- impaired skin hydration, thermreg & ↑suscep to infections
- Thermoregulation link:
- Microfibril associated glycoprotein 1 (MAGP1) may reg E metabolism in adipose T
- component of ECM, plays role in thermoregulation by indirectly reg XPS’ion of the thermogenic uncoupling proteins (UCPs); a proton transporter that allow

Atopic dermatitis
- abnormal BM composition
- ↓ BM thickness & ↓ XPS’ion of collagen-IV, integrin-a6, & FN in the BM zone
- Many SNPs in LAMA3 correlate w/ ↑AD incidence

18
Q

Name the different components of focal adhesions (9) (1/1)

A

A cell, adherent to FN on the ECM, will have a focal complex and a focal adhesion, the latter consists of:
- actin
- α-actinin
- myosin
- vinculin
- talin
- paxillin
- cell membrane
- integrin dimer
- fibronectin

  • cells adhere via their leading edge (integrin) to ligands of the ECM (FN)
  • focal complexes form in the lamellipodium, may mature to focal adhesions in the lamella
  • FA are typically connected to one another via stress fibres, or connected to the actin network forming dorsal stress fibres
  • Talin form actin stress fibres that can contract in the presence of myosin-II motor molecules
    • link supported by proteins (vinculin, paxillin, α-actinin)
19
Q

How do focal adhesions change under different matrix stiffnesses? (10) (1/1)

A
  • sense & respond to physical forces within the ECM (via FA)
  • adapt morphology & migrate to other locations
  • shape of many mammalian cells = reliant on the matrix stiffness that they grow on
  • mediated by FA (dis)assembly, reg biochemically & mechanically
    • mechanosensitivity of FA = reg by talin & p130 cas (Δ conformation in resp to mech force)
    • disassembly rate = highest on soft ECMs, lower on stiff matrices
    • stretching occurs on stiff matrices, stretching of talin reveals vinculin-binding sites, ↑ vinculin binds to FA = ↑ more stable
    • integrin (α5-β1) obvs to act as ‘catch-bonds’ & their lifetime ↑ under force

Soft
- forces develop slowly
- FA ≠ grow enough to stick the cell to the SBT
- cell retracts its protrusion

Stiff
- forces build up rapidly
- FA stabilise (more vinculin b/c of talin stretching)
- cell adheres to SBT
- process repeats with other protrusions, allowing for maximal spreading

visualise cell stretching on different matrices with actin staining
- soft (4 kPa): not spread
- stiff (150 kPa): spread

20
Q

How are HIPPO signalling & the ECM stiffness linked - explain the principle of HIPPO signalling (11) (1/2)

Link?

A
  • HP reg cellular homeostasis
  • extracellularly reg by mechanical stimuli & diffusible chemicals
    • sig sensed mostly by receptors (i.e., GPCRs) & adherence complexes
  • ↑ly specifc resp ensured b/c receptors & junctional complexes become concentrated in distinct membrane structures
  • HP also reg by exo- & endocytosis
  • stiff matrix sensed by integrins → activation of Rho, leading to formation of stress fibres
    • stress fibre formation ass with phos of LIMD1 & LATS1/2
    • inhibits kinase that would usually phos YAP/TAZ
    • LATS unable to inhibit YAP, ∴ translocates to nucleus = prolif etc
    • stiffer matrix means activation of YAP/TAZ & inactivation of HP
21
Q

How are HIPPO signalling & the ECM stiffness linked - explain the principle of HIPPO signalling (11) (2/2)

Principle of HIPPO.

A

HP on (YAP inactive):
- LATS1/2 can become phosphorylated by MST1/2-SAV complex
- p-LATS1/2 phos YAP
- p-YAP = degraded & sequestered in cytoplasm
- cell differentiation, apoptosis

HP off (YAP active):
- under stiffer matrix, GPCR signalling via Rho triggers actin stabilisation which inhibits MST1/2-SAV phosphorylation of LATS1/2)
- LATS1/2 cannot phos YAP
- YAP can translocate to nucleus & act with TEAD
- proliferation, anti-apoptosis, EMT
- target genes: NOTCH2, JAG1

22
Q

What is an important downstream signalling pathway of an ECM receptor? (12) (1/1)

  • Different receptors & targets
  • HA (different MW) involved in inflammation
A
  • ECM has multitude of macromolecules (growth factors, cytokines, chemokines, matrix-degrading enzymes etc)
  • in diff combinations, these are inv in reg of cellular homeostasis

Receptors & their targets
- integrins → laminins, collagens, FN
- discodin domain receptors (DDR) → collagen
- syndecans → FN & intracellular actin-associated protein (α-actinin)
- CD44 → HA, collagens, FN, laminins

Specific example - role of HA fragments in inflammation
- LMW HA
- pro-inflamm & binds CD44 & TLRs
- augments inflam resp via activation of NLRP3/ASC inflammasome
- production of IL-1B
- HMW HA
- many anti-inflam properties
- binding to CD44 → reduces IL8, TNFa & iNOS production
- can block LMW HA binding to TLR2