Exam I Flashcards
What types of receptor proteins are there?
- Regulatory proteins
- Enzymatic proteins
- Transport proteins
- Structural proteins
What are orphan receptors?
Identified receptors with an unidentified endogenous ligand (approximately 500 unidentified).
What are the seven receptor targets for drugs?
- Seven-transmembrane (7TM) receptors (GPCRs)
- Ligand-gated channels
- Ion channels
- Catalytic receptors
- Nuclear receptors
- Transporters
- Enzymes
In Cell Signaling, what protein actually modifies cellular metabolism, function, movement, etc. ?
The Effector protein
Name the cell signaling components in order starting with the signaling molecule (i.e. drug, endogenous ligand, etc.)
1st - Signaling molecule, endogenous ligand
2nd - Receptor where ligand attaches
3rd - Signal transduction proteins and second messengers send signal.
4th - Effector protein receives signal and effects change.
Some drugs affect gene expression and in doing so have a lag period, why is this? how long is this typically?
- The lag period results from the process of transcription to translation to protein creation occurring.
- Responses seen 30 minutes to several hours.
Dose response to the coupling of a drug to a receptor can be _____ or _____. Explain the difference between the two.
- Linear or exponential.
1. In linear the number of receptors capture is directly related to effect, 25% receptors bound vs 50%.
2. In exponential, 1 receptor could send a signal cascade where 100’s or 1000’s of effector proteins are engaged for the one drug attached to the receptor.
What are kinase’s and what is their role in the cell signaling phosphorylation cascade?
Kinases are a phosphate group that binds to a signaling or secondary messenger protein and induces a cascade of messages reaching the effector proteins.
What are phosphatase’s and what is their role in the cell signaling phosphorylation cascade?
Phosphatases block phosphorylation cascade from continuing to occur by deleting a protein (or a phosphate group?) and blocking downstream effects.
What are the mechanisms for transmembrane signalling?
- Intracellular receptors (need to be lipid soluble)
- Cell Surface receptors (3)
- Ion channels - Catalytic - GPCRs
What are GPCRs? How many drugs are GPCRs?
- Guanine Triphosphide Protein Coupled Receptors (or just G-protein coupled receptors).
- 2/3rds of all non-antibiotics
- 500 identified, 500 orphan
What characterizes a “fast” GPCR response?
- metabotropic ion channels causing a flood of ions (ex. B1)
What characterizes a slow GPCR response?
Transcription factor activation
What are the secondary messengers in the GPCR response? Which two of these messengers come from the cell membrane?
- cAMP (cyclated ATP)
- cGMP
- Calcium
- DAG
- IP3
DAG and IP3 come from phospholipids in the cell membrane.
What are the primary ligands of Tyrosine Kinase Receptors (RTKs)?
- Growth factors
- Adhesions
The process for RTKs (Receptor Tyrosine Kinase) binding is essentially three steps, what are these steps?
- 2 ligands bind and produce dimer.
- Dimer now has activated tyrosine regions that get phosphorylated by ATP (6 phosphates).
- The phosphorylated tyrosine regions are “docked” by relay proteins (causing a conformational change in the proteins) and multiple downstream responses are activated.
Where are voltage gated channels found? What are their characteristics?
- Found in excitable cells
- Neurons, muscle, endocrine
- Closed at resting membrane potential
- Types based on what ion’s get through (Na+ vs K+ vs Ca2+)
What are the two types of Ligand-Gated Ion channels? What is the difference between these two?
- Ionotropic - Ligand binds on protein and the protein opens a channel on itself to let an ion through. (ACh receptors)
- Metabotropic - Ligand activates a GPCR that initiates a sequence to open an ion channel.
What types of ligands are able to reach intracellular receptors?
- Gasses (like NO, or CO2)
- Lipid soluble agents capable of passing through phospholipid bilayer.
Why do steroids take a while to effect a change?
Steroids must:
- Cross phospholipid bilayer.
- Attach to steroid receptor in cytoplasm.
- Bind to receptor site on chromatin
- Chromatin then activates mRNA transcription to create proteins.
Name 4 transmembrane signaling methods by which drug-receptor interactions exert their effects.
- Intracellular receptor (gasses. lipophillic molecules)
- ion channel
- Catalytic receptor
- GCPR
What does Drug Biotransformation refer to? Is drug biotransformation going to inactivate all drugs?
- Termination of drug activity w/ mechanisms aside from renal.
- .Metabolic conversion (as with prodrugs)
- Some metabolites become active after biotransformation.
- .Metabolic conversion (as with prodrugs)
Where does drug biotransformation primarily occur?
Liver
Describe the process of the liver biotransforming a PO ingested drug. Include anatomy and physiology of the process.
- GI tract
- Local GI venous system
- Hepatic portal vein
- Sinusoids
- Hepatic vein
- Vena Cava
- Systemic circulation.
Describe the process path by which the liver would biotransform an IV injected drug?
- Systemic circulation
- hepatic artery
- Sinusoids
- Hepatic vein
- Vena Cava
- Systemic circulation
What characterizes Phase I reactions? What is the end purpose?
- Takes place in the liver.
-
CYP Enzymes add or unmask a functional group (-OH, -NH, etc) thus making metabolite more active/polar.
- Uses oxidation, reduction, hydrolysis
- Inactivates drugs
- Makes drugs more readily excreted.
What characterizes a Phase II reaction?
-
Conjugation to an endogenous substrate
- Adding a large group to the drug (protein, -SO4, or glucose, etc)
- Results in a higher molecular weight compound.
What is the most important method by which Phase I reactions occur? What is the process?
By far, the most important Phase I reaction is oxidation-reduction utilizing Cytochrome P450.
- Drug enters liver lipophillic
- Drug binds to P450
- Oxidation-Reduction reactions occur
- Drug is released in a hydrophillic form.
What are some characteristics (specificity, number known, location of origin, variants, etc) of Human Liver P450 enzymes?
- Low substrate specificity
- Over 50 human P450’s
- Primarily found found in Granular ER (produced there?)
- Polymorphic variants
- CYPA1 (common wild type)
- CYPA2 ( mutation) can be good or bad.
What should be known about Cytochrome P450 inducers?
- CYP induction drugs enhance native metabolism resulting in:
- decreased drug effect if metabolism normally inactivates the drug.
- increased drug effect if metabolism normally activates the drug.
What should be known about a Cytochrome P450 Inhibitors?
- The drug will decrease or irreversibly inhibit Cytochrome P450 resulting in decreased native metabolism resulting in:
- Increased drug since no native drug metabolism is occurring.
- decreased drug if native metabolism yields an active drug from a prodrug.
What groups of CYP compose 78% of all known CYPs?
- 2B6
- 2D6
- 3A4
What should be known about brussel sprouts and CYPs?
- Cruciferous vegetable = Inducer of CYP1A2
- Warfarin inactivates CYP1A2 to reduce clotting
- So brussel sprouts will decrease warfarin levels and increase clotting.
What does a P450 Inducer drug do?
Potentiates the effects of the P450 enzyme. This can lead to 2 outcomes:
- p450 is induced to metabolize more drug resulting in drug inactivation.
- p450 is induced to metabolize more prodrug resulting in drug activation.
What does CYP1A2 metabolize?
Acetaminophen
What does CYP2E1 metabolize?
Ethanol (21 to drink Ethanol)
What does CYP2C9 metabolize?
Warfarin (Warfarin works on factors 2, 9, and protein C)
What does CYP2D6 metabolize?
Cardiovascular drugs (2D Echo)
What does CYP3A4 metabolize?
60% of all drugs
just guess this one if it doesn’t fall into the other categories.
How can competitive inhibition of CYP450 enzymes occur?
By giving two drugs metabolized by that same particular enzyme. This results in inhibition of one drug or partial inhibition of both.
Do charged or uncharged drugs cross barriers more easy? What characteristic makes said drug cross barriers easier?
Uncharged. Lipophillic drugs cross the phospholipid bilayer much easier.
What are aqueous channels of cells called?
Aquaporins
What are the 4 ways that drugs permeate (pharmacokinetics) into a cell?
- Aqueous Diffusion
- Lipid Diffusion
- Special Carriers
- Endocytosis and Exocytosis
What prevents a drug from permeating through aqueous diffusion?
- If the drug is highly charged or bound to large protein carriers.
Which of the 4 drug permeation methods is often the limiting factor for successful permeation? Why?
Lipid Diffusion (I think that this means lack of lipid solubility)
There are often many lipid barriers to cross.
What characterizes permeation through special carriers? Which two methods of transport are used with this method?
- Drug is bound to protein and moves with the protein across a barrier.
- Active Transport and facilitated diffusion.
What is the mechanism of action of cocaine?
- Cocaine blocks the reuptake of several important endogenous ligands. Notably dopamine and norepinephrine.
- Specifically, NET (Norepinephrine Transporter protein) is blocked from “picking up” the NE, so it continues to circulate.)
Give examples of endocytosis and exocytosis in regards to drug permeation?
- Endocytosis - clathrin pit mechanism for endocytosis.
- Exocytosis - GI cells pull in drugs, and “spit” back out to nervous system.
What is the blood volume to weight ratio for a 70kg person?
0.08L/Kg = 5.6L/70kg person
What is the blood plasma volume to weight equation for a 70kg person?
0.04L/Kg = 2.8L/70kg person
What is meant by a high Vd?
A high Vd means that a drug will be dispersed out of the blood and into the tissue.
What does a low Vd mean and what numbers actually denote a low value?
A low Volume of Distribution (Vd) means that the drug will primarily stay in the blood.
5-10 would characterize a low Vd
Describe the difference between clearance and rate of elimination.
- Clearance is the volume of blood that is cleared of drug in a given time. (Usually ml/min)
- Rate of elimination is the clearance multiplied by the concentration of drug in the blood.
How is rate of elimination calculated?
Rate of Elimination = CL (clearance) x drug concentration in blood.
For the scenario of first order elimination, out of clearance and rate of elimination, which of these two is constant? which varies?
- Clearance is a constant number (in L/min) while rate of elimination varies because the drug concentration in the body will vary.
In regards to zero order elimination, which of clearance and rate of elimination is constant? which varies?
- In Zero Order Elimination, the rate of elimination is constant because the body’s ability to get rid of the drug is maxed out.
- The clearance percentage varies because the actual amount of drug cleared in constant.
What is capacity-limited elimination? What order of elimination results from this situation?
- This is a situation where the clearance is non-linear because the drug concentration increases.
- The drug starts out as 1st order but as the body gets maxed out, it becomes a zero order elimination situation.
What is the Vmax ? When is this term exemplified?
Vmax is the maximal elimination capacity. This occurs in zero order elimination where the body is maxed out and only gets rid of so much drug per minute.
Which drugs are characterized by capacity-limited elimination?
- Zero order elimination drugs such as:
- aspirin
- phenytoin
- ethanol