Exam 4 Flashcards

1
Q

Helicase

A

unzipping DNA seperating strands

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2
Q

DNA Gyrase

A

Prevent Coiling

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3
Q

DNA Polymerase

A

synthhesize new/ replicated strands
5 prime to 3 prime

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4
Q

Endonucleases

A

Cut the DNA Intially

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5
Q

Endonucleases

A

Cut the DNA Intially

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6
Q

Exonucleases

A

Cut DNA at the tips/ends

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7
Q

scientist Griffith

A

first experiment suggesting that bacteria are capable of transforming genetic information through a process known as transformation

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8
Q

Scientists Avery, Macleod, and Mccarty

A

transforming principle was DNA

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9
Q

Chargaff

A

The individual responsible for discovering the base pairing rules for DNA.

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10
Q

Fanklin and Wilkins

A

double helix structure of DNA

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11
Q

Watson and Crick

A

3D double helix structure of DNA

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12
Q

Meselson and Stahl

A

Determined that DNA replication is semiconservative.

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13
Q

Structure of DNA

A

two linked strands that wind around each other to resemble a twisted ladder — a shape known as a double helix

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14
Q

what bond links two nucleotides

A

phosphodiester bond

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15
Q

What bond links two nitrogenous bases?

A

three hydrogen bonds

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16
Q

Antiparallel Nature of DNA

A

two strands of the DNA double helix are read in opposite directions
-DNA is read/transcribed from 3’ to 5’

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17
Q

semiconservative nature of dna replication

A

produces two copies that each contained one of the original strands of dna and one new strand

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18
Q

Prokaryotic Cell DNA

A

found in nucleoid region
-single strand
- Bacteria and Archaea

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19
Q

Eukaryotic Cell DNA

A

mammals (YOU)
-Double strand
-found in Nucleus

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20
Q

Primase

A

synthesizes RNA primer during DNA Replication

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21
Q

DNA Ligase

A

join together fragments of newly synthesizd DNA to form a seamless strand

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22
Q

Leading Strand

A

strand that runs 5’ to 3’ direction in the replication fork

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23
Q

lagging strand

A

one of two strands of DNA found at the replication fork, or junction, in the double helix

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24
Q

Okazaki fragments

A

small sections of DNA that are formed during discontinuous synthesis of the lagging strand during DNA replication

25
Telomeres
found at both end of each chromosomes protects genome from necleoytc degradation
26
telomerases
Enzymes that replace/repair telomeres by adding back onto the degraded DNA strand. 1) Expressed in rapidly dividing cells
27
two DNA repair mechanisms we talked about (thymine dimers and a damaged/incorrect base.
photoreactivation- energy from visible light is used to split the bonds forming th cyclobutane ring alkylating agents
28
Beadle and Tatum
one gene one enzyme hypothesis
29
crick and brinner
first discovered codon
30
nurenberg
three nucleotide sequence coding 1 amino acid
31
one gene-one polypeptide hypothesis
there is one gene that codes for one polypeptide
32
one gene one protein
Unit of DNA which codes for one protein
33
central dogma of molecular biology
information is transferred from DNA to RNA to protein
34
translation
process a protein is synthesized from the ino contained in a molecule of messenger RNA (mRNA)
35
transcription
the info in a strand of DNA is copied into a new molecule of messenger
36
stop codon
UAA, UAG, UGA
37
start codin
AUG
38
template strand
guides the formation of mRNA through complementary base pairing
39
coding strand
serves as a template for producing complementary RNA
40
polymerase
A method of producing thousands of copies of DNA segment using the enzyme DNA polymerase
41
steps of transcription
1. Initiation- beginning 2. Elongation- nucleotides to the mRNA strand 3. Termination- ending, occurs when RNA Polymerase crosses a stop sequence in the gene
42
Transcription in Prokaryotes
occurs in the cytoplasm initiation, elongation, and termination RNA Polymerase recognizes a promoter site on the DNA Strand
43
Eukaryotic Transcription
occurs in the nucleus under the direction of three forms of RNA polymerases.
44
how does spliceosomes work
they assemble on RNA Polymerase II transcripts from which they excise RNA sequences called introng and splice together the flaning sequences called exons
45
define exons
a segment of a DNA or RNA molecule containing information coding for a protein or peptide sequence.
46
define introns
a segment of a DNA or RNA molecule that does not code for proteins and interrupts the sequence of genes.
47
transfer RNA
serves as a link between the mRNA an the growing chain of amino acids that make up a protein
48
E site
exit) location "empty" tRNA sits before being released back into the cytoplasm
49
P site
holds the tRNA carrying the growing polypeptide chain
50
A site
accepts the incoming aminocyl-tRNA
51
Translation: initated, terminated, elongated
ribosome gets together with the mRNA ans the first trna so translation begins, amino acids are brought to the ribosome by trnas and linked together to form a chain
52
Point Mutations
Frameshift, silent, nonsense, and missense
53
Chromosal mutations
deletion, duplication, inversion, translocation
54
genes regulated in eukaryotes
epigenetic regulation (INTERNAL)
55
major groove of DNA
main site for protein binding where proteins interact with several nucleotides
56
Major motifs involved in DNA binding
Helix turn Helix motif, Leucine Zipper Motif, Helix loop helix, zinc finger motif,
57
Positive controls
ensure that a change in the dependent variable occurs when expected
58
Negative Controls
ensure no change in the dependent variable when no change is expected