Exam 3 Theisen review PART 1 Flashcards

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1
Q

4 types of cell signaling (based on distance)

A
  1. Endocrine signaling 2. Paracrine signaling 3. Autocrine signaling 4. Direct cell signaling (Juxtacrine signaling)
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2
Q

Endocrine signaling:

A

Long distance signaling Signal –> Bloodstream –> distant target signal -freely diffuse signal -long lasting/ long half-life in minutes -takes time to go through the circulatory system to find a target cell ** Hormones

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3
Q

Paracrine signaling:

A

acts locally -affects cells nearby (not as freely diffusible) -short lived signal -** neurotransmitters

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4
Q

Autocrinesignaling

A

-cells respond to their own signals, or release to cells of the same type. -cells release signal that feeds back and binds to a receptor on its own surface. -** growth factors in cancer. Paracrine signal —> autocrine signal —> cells to mature.

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5
Q

Direct cell signal (juxtacrine signaling) :

A

-Cell to cell contact. ** immune cells —- APC to T-cells

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6
Q

Each cell interprets the combination of all these types of signaling to determine what to do:

A

-survive -divide -differentiate -die

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7
Q

Cell surface receptors:

A

most signaling molecules are hydrophilic and require cell-surface receptors

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8
Q

Intracellular receptors

A

Small hydrophobic signaling molecules can diffuse across the cytoplasmic membrane and bind to intracellular receptors.

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9
Q

What are the three main types of cell signaling receptors in the plasma membrane?

A

-Gated ion channels common in nervous tissue. - GPCRs use t-pass transmembrane proteins. -Enzyme-coupled receptors class included receptor tyrosine kinases (RTKs)

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10
Q

List the steps in signaling by trimeric G-proteins

A

-inactive -activation or receptor by ligand binding. -activated receptor binds to G-protein (acts as GEF). -G-alpha releases GDP and binds GTP, and dissociates from G-beta-gamma. -G-alpha binds and activates adenylyl cyclase. -G-alpha hydrolyses GTP to GDP, dissociates from adenylyl cylcase and binds G - Beta-Gamma (inactive)

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11
Q

Signal amplification in the cAMP pathway

A

-1 signal ligand bind with receptor protein -each activated receptor protein may activate many molecules of Gs protein, which liberates and alpha subunit that can activate an adenylyl cyclase molecule for a prolonged period. -each adenylyl cyclase generates many cAMP molecules. -cAMP molecules activate A-kinase (PKA) -each PKA can phosphorylate and activate many copies of enzyme X. -each copy of enzyme X produces many molecules of substrate/product. **** leads to amplification.

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12
Q

How does cAMP cause a biological response?

A

it interacts with its target proteins,. -cAMP activates cAMP-dependent protein kinase (PKA)-4 subunits. -Inactive PKA:2 catalytic subunits & 2 regulatory subunits binding to 2 cAMP molecules to regulator subunits of tetramer results in release of active Catalytic subunits.

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13
Q

Receptor tyrosine kinase activity

A

-RTK bins to SH2 of Grb2. -Grb2 also has SH3 domain. -SH3 of Grb2 binds to prolines of SOS (son of sevenless), which then binds to Ras (small monomeric G protein -Small GTPase). -Ras discovered in human oncogene, plays crucial role in cell division and frequent mutation in cancer. - Ras Binds Raf and then thing get insane.

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14
Q

What is downstream of Ras?

A

Ras recruits Raf to plasma membrane and helps activate it. Raf ( MAP kinase kinase Kinase) helps activate MAP Kinase Kinase (Mek), which helps activate Map Kinase (Erk). -Erk in turn phosphorylates a variety of downstream proteins. including other protein kinases and transcription regulators.

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15
Q

What can occur between G-protein-coupled receptor pathways and protein tyrosine kinase receptor pathways?

A

Cross-talk

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16
Q

Desensitization is the ability to turn off or reject the signal, such as in cell cycle in cancer. What can be used to remove the signal molecule? Where is the receptor sequestration? What is the receptor destruction?

A

Phosphodiesterases will remove cAMP. -sequestration: endosome. -Destruction: Endosome + lysosomes (proteases)

17
Q

Related to desensitization of signal: what do the proteins GRKs (g protein receptor kinases) do?

A

GRKs phosphorylate the receptor such that another protein called arrestin will bind to the 3rd intracellular loop. -result is that G-alpha-GDP does not get converted to G-alpha-GTP.

18
Q

Properties of actin filaments

A

-two-stranded helical polymers of the protein actin -ACTIN subunits are compact and globular (G-actin vs F-actin). -Flexible structure 5-9 nm in diameter.

19
Q

explain nucleotide hydrolysis

A

-actin and tubulin are enzymes that catalyze ATP or GTP. -T form ATP/GTP bound -D form is ADP/GDP bound. each monomer carries a tightly bound ATP or GTP molecule that is hydrolyzed to ADP or GDP soon after the monomer assembles into the polymer. -Two types of subunit structures, T form and D form.

20
Q

In nucleotide hydrolysis how is the ATP or GTP cap formed?

A

If rate of polymerization is faster than the rate of hydrolysis of the bound nucleotide, the tip of polymer remains T form, as and ATP cap or GTP cap.

21
Q

What is treadmilling?

A
  • Subunit additon at plus end is greater than at minus end. -Plus end remains in T formation -Minus end adopts D formation. - Subunits added at plus end and removed at minus end. - The plus end grows while the minus end shrinks, called treadmilling. -the polymer maintains a constant length. -Treadmilling predominates in actin filaments. *******
22
Q

What are the properties of microtubules?

A
  • are made of tubulin subunits that are compact and globular. -Are long and hollow - are long and straight -out diameter 25 nm - more rigid than actin filaments - have one end attached to a single microtubule-organizing center (MTOC) called a centrosome.
23
Q

Dynamic Instability PREDOMINATES IN MICROTUBULES: explain the process

A

The rapid inter-conversion between a growing and shrinking state at a constant concentration of free subunits.

24
Q

Related to dynamic instability what is “catastrophe”?

A

If nucleotide hydrolysis proceeds more rapidly than subunit addition, the cap is lost and the microtubule begins to shrink.

25
Q

Related to dynamic instability what is “rescue”?

A

GTP-containing subunits may still add to the shrinking end, and if enough add to form a cap then microtubule growth remains.

26
Q

What are intermediate filaments?

A

-rope-like fiber, diameter 10 nm -Large heterogeneous family. -Are made of smaller subunits that are themselves elongates and fibrous. -Extend across the cytoplasm to provide mechanical strength. -Span from one cell-cell junction to another to strengthen the epithelial sheet.

27
Q

Explain the construction of intermediate filaments.

A
  • Each monomer is an elongated molecule with and extended central alpha-helical domain. -Monomer forms a parallel coiled-coil dimer with another monomer -A pair of dimers associates in an antiparallel manner (N to C; C to N) to form a staggered tetramer. PROTOFILAMENT ***NO NUCLEOTIDE BINDING SITE AND STRUCTURAL POLARITY*****
28
Q

What are intermediate filaments: The keratins?

A

-Keratins: the most diverse group of intermediate filaments. -Human Genome: 50 distinct keratin genes. -about 20 found in human epithelial cells. - 10 more specific to hair and nails. -impart mechanical strength by anchoring intermediate filaments at site of cell-cell contacts, DESMOSOMES, or cell-matrix contacts, called HEMIDESMOSOMES.

29
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30
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