Exam 3 Flashcards
Transformation
Uptake of free DNA from environment, discovered by Griffith
Fred Griffith
Used nonvirulent and virulent encapsulated Streptococcus pneumoniae cultures on mice to discover transformation
Competent cells
Can naturally take up DNA and be transformed (some are specific in origin)
Gram + competent genera
Bacillus and Streptococcus
Gram - competent genera
Haemophilus, Neisseria and Acinetobacter
Artificial transformation
Makes naturally non-competent cells transform (Ex. Escherichia coli)
Occurs via two techniques: CaCl2 (increases permeability), and electroporation (high-voltage currents form temporary holes in cell wall/plasma membrane)
During transformation, ____ DNA is taken up and converted into ____ DNA, which is incorporated into the genome via a ____
double-stranded, single-stranded, nuclease
Protein that integrates DNA by homologous recombination
RecA
Mobile DNA
Consists of transposable elements that move via transposition
Deinococcus radiodurans
Mesophilic, extremely resistant to radiation and desiccation (drying out) via DNA repair mechanism, commonly found in tetrads
Thermus aquaticus
Thermophile, grows in hot springs, source of Taq polymerase for PCR
Phylum Cyanobacteria
Primary producers in many ecosystems
* Carries out oxygenic photosynthesis (produces O2, water is e- donor, 2 photosystems, generate ATP and NADPH for dark rxns)
* Contains thylakoids with chlorophyll, carboxysomes with C fixation enzymes
Phylum Cyanobacteria, Genus Spirulina
- Alkaliphile (soda lakes)
- High [carotene], food additive, protein, vitamin-rich
Phylum Cyanobacteria, Genus Anabaena
Aquatic bacterium carrying out oxygenic photosynthesis and atmospheric N fixation to ammonia for use by cells (nitrogenase enzyme sensitive to O2
Heterocysts
Differentiated from Anabaena vegetative cells that remain devoid of O2, form every 10th cell
Phylum Chlamydiae
Gram-, obligate intracellular bacteria (pathogenic to animals and humans)
Pathogenic bacteria of phylum Chlamydiae of the genus Chlamydia
- C. pneumoniae
- C. trachomatis (causes #1 reported bacterial STI in U.S.)
Chlamydia reproduction steps
- Attachment of infectious, dormant Elementary Body (EB) via endocytosis
- Inside cell, EB develops into reproductive, non-infectious Reticulate Body (RB) and divides
- RBs differentiate back into EBs, which then are released by host cell lysis
Phylum Spirochaetes
- Flexible, helical shape
- Flagella reside within the periplasm (axial filaments), which rotate and move the whole cell
- Some types are pathogenic (ex. Treponema pallidum - Syphilis, Borrelia burgdorferi - Lyme Disease (from ticks) - identified by Erythema Migrans (bullseye rash))
Phylum Bacteroidetes, Genus Bacteroides
- Obligate anaerobes
- Degrade complex dietary polysaccharides
- Important to intestinal tract of humans, indicator of human health (makes up 30% of bacteria cultured from feces)
Phylum Proteobacteria (Gram -)
Largest group with diverse cell forms and metabolism, broken up into classes:
* Alpha
* Beta
* Gamma
* Delta
* Epsilon
Alpha Proteobacteria
Some are photoheterotrophs, using method of anoxygenic photosynthesis (bacteriochlorophyll) (ex. Rhodospirillum)
Others include:
* Rhizobium - root nodules, fixes N2 for plant symbiont
* Rickettsia - obligate intracellular bacteria in animals (pathogen), causative agent of Rocky Mountain Spotted Fever (ticks)
* Agrobacterium - infect plants
Agrobacterium tumefaciens
- Causes crown gall disease in plants
- Has tumor-inducing (Ti) plasmid
How does A. tumefaciens infect a host plant cell?
A piece of the Ti plasmid T DNA is transferred via conjugation from the bacterium into the plant cell, where it integrates into the plant genome and expresses bacterial Ti genes