Exam 2 Flashcards
how do we test the proposed functions of domains of channel proteins?
sequence homologies– determine which portions of primary sequences of ion channels are same/very similar (we look at the same channel from several different species, and what is conserved must be important)
sequence homologies in the ACh gated channel
ACh receptor portion of the channel is highly conserved
sequence homologies in Vg channels
they all have a membrane spanning region with charged amino acids at each third position; the voltage sensor is found only in voltage gated channels
structure of voltage gated channels
six transmembrane motifs, voltage sensor on S4, pore between S5 and S6; it takes four motifs to make a functional channel
what amino acid is highly common in voltage sensors
arginine
each ion has a different
radius, number of water molecules, and diameter of first hydration shield
carbonyls
replace shell of hydration in K+ but not Na+ in the K+ channel
procedure to transplant neurotransmitter receptors from brain to oocytes
injecting cell membranes or brain mrna
homogenize brain sample, centrifuge, collect and inject vesicles into oocyte
you can also homogenize then separate polyA+ RNA, inject it and wait 6 days to record
advantages of xenopus oocytes for studying ion channels
big cells so easy to do electrophysiology, will express large amounts of channel of interest, can introduce exogenous channel from native sources or recombinant DNA
patch clamp technique
record a small portion of the cell and current in that cell: can be cell-attached, whole-cell, or outside-out recording
patch clamp can be used to study
currents through individual ion channels
Na and K+ channels ______ by depolarization
are opened
VgNA+C at depolarization
quickly open, inactivate, returned to closed state
VgK+C at depolarization
don’t inactivate, delayed/slower opening
alpha subunits
are the pore forming subunits
K+ channels are a
family of voltage gated channels with greatest diversity
function of K channels
regulating excitability in many tissues, in axons and somatodendritic compartments; also help set resting potential
protein name format for voltage gated channels
ion, subscript family name (v for voltage), family number, position or individual number of protein
Nav1.7
Kv2.1
don’t inactivate, contribute to the falling phase of the AP, called delayed rectifiers
Kv4
an A type channel that rapidly inactivates, regulating AP frequency in areas like the hippocampus
HERG channels (Kv11.1)
delayed current after depolarization, contribute to duration of hyperpolarization after depolarization
Inward rectifying channels
more active at hyperpolarized potentials, increasing threshold for AP and including KATP to produce K+ when ATP is low
Kca
protect neurons from excess depolarization when Ca2+ is high (more conductance with more Ca2=)
2-p family
K+ leak channels that set resting potential
functions of K+ channels
resting membrane potential
mediate AP downstroke
regulate length of hyperpolarization after AP
regulate excitability in dendrites
decrease excitability during metabolic stress like high ca and low atp intracellularly
channelopathies
diseases caused by ion channel dysfunction, can be caused by genetic mutation or can be acquired via an autoimmune attack, can have developmental or episodic manifestations and affects many tissues,
episodic disorders
affect excitable tissues like brain, muscles, heart, characterized by attacks
causes of episodic disorders
mutations to channels or to excitability, autoimmune diseases, brain lesions/tumors
what triggers an attack?
ion imbalance, chemical triggers, stress, etc
seizure
abnornal/excessive excitation or synchronization of a population of neurons
epilepsy
spontaneous recurrent seizures unprovoked by any systemic or acute neurologic insults
epileptogenesis
sequence of events that converts a normal neuronal network into an epileptic network
epilepsies
many but not all caused by channelopathies with excess Na/Ca currents or reduced K/Cl currents
caused by periodic excess excitation in brain, GOF in depolarizing, loss of function in hyperpolarizing
hyper and hypokalemic periodic paralysis
muscle weakness triggered by exercise or stress, causing loss of muscle tone; categorized by levels of potassium associated with attacks and caused by mutations in ion channels in skeletal muscle
(hypo: low serum K_
in hypokalemia, low serum K+ is accompanied by
prolonged inactivation/reduced function of VgNaCs
prolonged inactivation/reduced function of VgNaCs means that
muscle excitability is insufficient to complete movements
migraines and seizures occur after
excess excitation in the brain; GOF in depolarizing or LOF in hyperpolarizing
familial hemiplegic migraine
disorder characterized by headaches and weakeness on one side of the body, many known genetic causes including more activity of Cav2.1
GEFS
generalized epilepsy with febrile seizure, seizures accompanied by high body temp, mutations cause slowed inactivation of VgNAcs, so excess depolarization when AP is triggered
list some diseases caused by altered ion channels
gefs, myotonia, paralysis
episodic ataxia type 1
uncoordinated movement provoked by stress, startle, exercise caused by LOF mutations in K channels in cerebellum, causing inadequate repolarization
Nav1.7
mediator of aps in nociceptive neurons
congenital insensitivity to pain
lack of pain perception, characterized often by injury or loss of extremities; loss function of Nav1.7 causing less output by DRG neurons
paroxysmal extreme pain disorder
more activity of Nav1.7, reduced inactivation, episodes of extreme pain in jaw, eyes, rectum
Nav1.7 associated with
congenital insensitivity to pain and paroxysmal extreme pain disorder
myotonia
delayed relaxation of muscle after contraction/movement due to loss of hyperpolarizing Cl- current in muscle prolonging contraction
function of electrical synapses
synchronization of electrical activity of large neuron populations
why is synchronization in electrical synapses important
important for functions requiring fast responses like reflexes and pacemakers
electrical vs chemical synapses
chemical involves neurotransmitter across a membrane, electrical involves direct connection via gap junctions where ions flow directly between cells
distance between membranes in gap junctions
wider part is 20 nm, closer part is 3.5 nm