exam 1 flashcards

info from chapters 1-5 for first exam

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1
Q

What characteristics do eukaryotic and prokaryotic cells have in common? How do they differ?

A
  • All cells are enclosed by a membrane that regulates the passage of materials between the cell and its surroundings.
  • All cells use DNA as their genetic information.
  • A eukaryotic cell has membrane-enclosed organelles, while a prokaryotic cell, does not contain a nucleus or other membrane-enclosed organelles.
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2
Q

What types of organisms are prokaryotic? Where is their genetic material?

A
  • Prokaryotic cells are found in two groups of single-celled microorganisms, bacteria (singular, bacterium) and archaea (singular, archaean).
  • A prokaryotic cell lacks a nucleus or other membrane- enclosed organelles. Furthermore, prokaryotic cells are generally smaller than eukaryotic cells.
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3
Q

What types are eukaryotic? Where is their genetic material?

A
  • All forms of life (except bacteria and archaea), including plants and animals, are composed of eukaryotic cells.
  • A eukaryotic cell contains membrane-enclosed organelles. Some organelles, such as the DNA-containing nucleus, are found in the cells of all eukaryotes; other organelles are specific to particular cell types.

EX: Chloroplast

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4
Q

What is taxonomy? What are the taxonomic groups that we use to classify living organisms? Which group is more general? Which is least general?

A
Domain (more general)
Kingdom
Phylum
Class
Order
Family
Genus
Species (least general)
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5
Q

State and give an example of the three domains of life. What is common about eukaryotes (plants, animals, fungi) and prokaryotes (bacteria and archaea)? How do they differ?

A

Bacteria (E. Coli), Archaea (Prokaryotes), and Eukarya (Animals); Eukaryotes have nucleus, prokaryotes do not

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6
Q

Compare positive and negative feedback mechanisms.

A
  • Positive feedback: more product accumulates, process speeds up
  • Negative feedback: more product accumulates, process slows down
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7
Q

What is a controlled experiment?

A

An experiment in which all the variables are compared to the control variable (CV never changes; ex: placebo)

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8
Q

What does it mean that a hypothesis must be testable and falsifiable?

A

Testable means being able to test it; falsifiable means it is possible for the hypothesis to be false by observation or experimentation

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9
Q

How are hypotheses and predictions related?

A

Hypothesis is an educated, testable guess and a prediction uses observable phenomena to make a future prediction

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10
Q

You are investigating what factors influence exam scores in your biology class. One factor you want to test is whether caffeine has a positive effect on exam scores. You divide the class into two groups: The first group does not have coffee before the exam. The second group drinks one cup of coffee before the exam. You then compare the exam scores.

  • What could be the hypothesis here?
  • What could be the prediction?
  • Which is your independent variable?
  • Which one is the dependent variable?
A

Caffeine consumption leads to better exam scores in students

If a student consumes coffee before an exam, they will get a better score

The coffee

The exam scores

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11
Q

What were Darwin’s main observations?

A
  • Individuals of a species are not identical
  • Traits are passed from generation to generation
  • More offspring are born than can survive
  • There will be variations between members of the same species
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12
Q

Describe what Darwin meant by “descent with modification” and “natural selection.”

A

Species change over time, give rise to new species, and share a common ancestor; natural selection is the favoritism of desirable traits.

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13
Q

What do we mean by unity of living organism? What are some similarities among different forms of life?

A

All living things share the same fundamental characteristics because they share a common ancestor (ex: homeostasis, reproduction, etc)

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14
Q

What is matter?

A

-Matter is anything that takes up space and has mass

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15
Q

What is an atom?

A

The smallest unit of matter that still retains the properties of an element.

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16
Q

What is an element? Which four elements make up 96% of human body mass?

A

-An element is a substance that cannot be broken down to other substances by chemical reactions. The four elements are Carbon, Nitrogen, Oxygen and Hydrogen.

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17
Q

What is compound? What kinds of bonds are needed? Provide examples of compounds

A

-Compound is a combination of two or more different elements combined in a fixed ratio. You need chemical bonds to make compounds, like a covalent bond, ionic bond or polar covalent. One example of a compound could be NaCl, which is sodium and chlorine combined.

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18
Q

What is molecule? What kinds of bonds are needed? Provide examples of molecules

A

-A molecule consists of two or more atoms held together by covalent bonds. They need either a single or double bond. An example of a compound is H2, or O2.

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19
Q

Describe these subatomic particles of the atom and how they interact with one another: proton; neutron, electron.

A

-Protons are positively charged atoms, neutrons are neutral, and electrons are negative. The neutrons and protons form the atomic nucleus. Electrons form a “cloud” of negative charge around the nucleus.

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20
Q

If a normal atom of an element has 8 protons:

  • which element is it?
  • how many electrons will it usually have?
  • how many neutrons will it usually have?
  • What is the element’s atomic number and atomic mass?
A

-8
-8
-8
Atomic Number: 8
Atomic Mass: 16 g/mol

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21
Q

If Cl has 17 electrons, 17 protons, and 18 neutrons, what is its atomic number? What about its mass number?

A

-Number: 17 ; Mass: 35

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22
Q

Describe electron shells.

A

-Electron shells are a grouping of electrons surrounding the nucleus of an atom. They are concentric circles that surround the atom.

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23
Q

What are valence electrons and how do they affect the bonding potential of an element?

A

-The electrons in the outermost shell are called valence electrons. If the valence shell is full, the element is chemically inert. Also, however many spaces are open in the valence shell of an element, that predicts how many bonds it will be able to form.

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24
Q

What are noble gases? Where are they in the periodic table?

A

-Noble gases are elements that are the most stable because their valence shells are completely full. They are also the most chemically unreactive.

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25
Q

What are isotopes?

A
  • Isotopes are two atoms of an element that differ in the number of neutrons.
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26
Q

Describe covalent bonds. How do they form?

A

-Covalent bond is the sharing of a pair of valence electrons by to atoms. Covalent bonds form when two nonmetal atoms share a pair of electrons.

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27
Q

What is a polar versus nonpolar covalent bond? How do the properties of polar and nonpolar molecule differ?

A

-In a polar bond, the atoms do not share the electron equally. In a nonpolar bond, the atoms share the electron equally. In a polar bond, they will have an excess charge due to the imbalance of electronegativity of atoms. Polar molecules also have a high boiling point, melting point.

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28
Q

What is an ionic compound? How do they form?

A
  • It is a compound composed of ions. An ionic compound is formed by ionic bonds.
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29
Q

What do you call an ion with a positive charge? How are they formed? Are some elements in the periodic table more likely to form positive ions than others? If so, why?

A

-An ion with a positive charge is a cation. Cations are formed by losing one or more electrons and gaining a positive charge. Most metals are shown to become positive ions fairly easily. They are easier to become positive because they have valence electrons in an S orbital.

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30
Q

What do you call an ion with a negative charge? How are they formed? Are some elements in the periodic table more likely to form negative ions than others? If so, why?

A

-An ion with a negative charge is an anion. They are formed by the addition of one or more electrons in the outer shell. Halogens form negative ions more easily than any other elements.

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31
Q

What is the composition of hydrogen (number of protons, neutrons, and electrons)?

A

-Hydrogen has 1 electron 1 proton and no neutrons.

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32
Q

How many protons and electrons are in a H+ ion? What about a H- ion?

A

-There is one proton and neutron, however there are no electrons. It is the opposite for the H- ion, there is one electron and no neutrons or protons.

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33
Q

What is a hydrogen bond? How does it form? Is it weaker or stronger than a covalent bond?

A

-A hydrogen bond is an attractive force between a partially positive charged hydrogen and a partially negative charged atom. (like oxygen or nitrogen) Hydrogen bonds are weaker than a covalent bond.

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34
Q

What is a chemical reaction? What does it mean when a chemical reaction is reversible?

A

-The making and breaking of chemical bonds, leading to changes in the composition of matter are called chemical reactions. When a chemical reaction is reversible it means that with the products of the forward reaction becoming the reactants for the reverse reaction.

35
Q

Describe a single molecule of water. What type of bonds hold the hydrogens and the oxygen together? How does the difference in electronegativity affect the sharing of the electrons?

A

Water molecules are cohesive and contain 2 Hydrogen atoms, 1 Oxygen atom and temperature regulating properties. Hydrogen bonds hold the atoms together. Because the water molecules are polar, the charges between H and O atoms aren’t evenly distributed.

36
Q

What is specific heat? What effect does water’s high specific heat have on large bodies of water and the land masses around them?

A

The specific heat of a substance is the amount of heat that must be absorbed or lost for 1g of that substance to change its temperature by 1 degree Celsius. Since water can absorb or release a large amount of heat with only a slight change to its own temperature, it keeps the land and area around it cooler and therefore regulates the temperature. Hydrogen bonds between water molecules cause heat to slow.

37
Q

How do the properties of solid water differ from those of liquid water?

A

In solid water the energy and molecules move slowly and are spread out. In liquid water the energy and molecules are close together and moving quickly, bumping into each other.

38
Q

What are the differences between hydrophobic and hydrophilic molecules? How do these properties relate to polar and non-polar bonds?

A

Hydrophobic molecules are water fearing and are therefore non-polar (stay away from water) and hydrophilic molecules are water loving, making them polar (attracted to water, which is also polar).

39
Q

What is a mole?

A

A mole is a quantifier derived from molecular mass which is the sum of all masses of all atoms in a molecule, expressed in Daltons.

40
Q

REMEMBER:

A

1 mole = 6.02 x 10 ^23

41
Q

Compare acids and bases. How do they affect the pH of a solution?

A

Acids are to the left on the PH scale and are lower numbers and they make the PH acidic. Bases are to the right on the PH scale, are higher numbers and mae the PH basic.

42
Q

Compare acids and bases. How do they affect the pH of a solution?

A

Acids are to the left on the PH scale and are lower numbers and they make the PH acidic. Bases are to the right on the PH scale, are higher numbers and make the PH basic.

43
Q

What affect does H+ ion concentration have on the pH of a solution?

A

If you add H+ ion to a concentration it will make the PH more acidic, if you lower the H+ ion it will make the PH more basic.

44
Q

Why do we say the hydrogen and hydroxide have an inverse relationship?

A

Adding hydrogen makes a solution acidic, adding hydroxide makes a solution more basic.

45
Q

Acid rain forms when water molecules in the atmosphere react with fossil fuel pollutants like Sulfur Dioxide (SO2) and nitrogen Oxides (NOx). The pH of acid rain is about 4. What is the hydrogen ion concentration in a drop of acid rain? What about the hydroxide ion concentration?

A

If the PH is 4 then the H+ concentration is 1x10 -4th power M and the OH- concentration is 1x10 -10th power M.

46
Q

Consider two solutions: solution A has a pH of 2; solution B has a pH of 5. What is the difference in H+ ion concentrations between the two solutions?

A

Solution A has 3 more H+ ions then solution B. The H+ concentration for solution A would be 1x10 -2nd power and for solution B it would be 1x10 -5th power.

47
Q

What is an organic compound?

A

Organic compounds range from simple molecules to colossal ones.

48
Q

How many electrons does carbon have? What is the valence of carbon, and how does it give carbon the ability to form large, complex molecules?

A

6 electrons; 4 valence electrons; A carbon atom usually completes its valence shell by sharing its 4 electrons with other atoms so that 8 electrons are present. Usually, carbon forms single or double covalent bonds. Each carbon atom acts as an intersection point from which a molecule can branch off in as many as four directions, which then enables carbon to form large, complex molecules.

49
Q

What are hydrocarbons?

A

Organic molecules consist of only carbon and hydrogen.

50
Q

n/a

A

n/a

51
Q

What are isomers? Describe the three types of isomers

A

Isomers are two or more compounds with the same formula but different arrangement of atoms

  • Structural isomers have different covalent arrangements of their atoms
  • Cis-trans isomers have the same covalent bonds but differ in their spatial arrangements
  • Enantiomers are isomers that are mirror images of each other
52
Q

What is necessary for cis-trans isomers to form? What about enantiomers?

A

Cis-trans isomers (also called geometric isomers) have the same covalent bonds but differ in their spatial arrangements

53
Q

What makes alcohol?

A

The hydroxyl group

54
Q

What is unique about methyl groups? What effect can methylation have?

A
  • The methyl group is not reactive, but instead often serves as a recognizable tag on biological molecules
  • Affects the expression of genes when bonded to DNA or to proteins that bind to DNA. Affects the shape and function of male and female sex hormones
55
Q

Of the functional groups discussed in class, which functional groups are considered acids? Which are considered bases? Name and draw the group

A
  • Hydroxyl group is acidic
  • Carbonyl group is acidic
  • Carboxyl group is acidic
  • Amino group is basic
  • Sulfhydryl group is basic
  • Phosphate group is acidic
  • Methyl group is basic
56
Q

What are polymers? Which macromolecules are polymers?

A

Polymers are long molecules consisting of many similar building blocks. Carbohydrates, proteins, and nucleic acids are polymers.

57
Q

Describe dehydration synthesis and hydrolysis. Which one assembles polymers? Which one breaks them apart?

A

Dehydration synthesis occurs when two monomers bond together through the loss of a water molecule, hydrolysis is the opposite. Dehydration assembles polymers, hydrolysis breaks them apart.

58
Q

What are carbohydrates used for in the body?

A

Fuel and building material.

59
Q

What is the name of the covalent bond between monosaccharides?

A

A glycosidic linkage.

60
Q

What is the difference between monosaccharides, disaccharides, and polysaccharides?

A

Monosaccharides are one, disaccharides are two monosaccharides, polysaccharides are many.

61
Q

What is the difference between a molecule of fructose and a molecule of glucose? How many atoms of C, H, and O does each have?

A

Glucose produces less fat in our bodies. Also glucose is a 6 membered ring, fructose is a 5 membered ring. Glucose C6H12O6, Fructose C6H12O6.

62
Q

n/a

A

n/a

63
Q

What is glycogen? How is it used in the body?

A

Storage polysaccharide stored mainly in liver and muscle cells. Hydrolysis of glycogen in these cells releases glucose when the demand for sugar increases.

64
Q

What is cellulose? What kind of linkage does it have? What is its function: a) in plants? b) in animals?

A

Major structural component of the tough wall of plant cells. Cellulose molecules (𝛃 configuration) are straight and unbranched.

65
Q

Describe the difference in structure between the three types of lipids (Triglycerides, phospholipids, steroids)?

A

Triglyceride- 3 fatty acids joined to glycerol by an ester linkage. Phospholipid- 2 fatty acids and a phosphate group are attached to glycerol. Steroids- carbon skeleton consisting of fused rings.

66
Q

What is glycerol?

A

A storage polysaccharide in animals

67
Q

What is a fatty acid?

A

Fatty acid consists of a carboxyl group attached to a long skeleton, fats separate from water because water molecules bond to themselves and exclude fats

68
Q

What are fats used for in the body?

A
  • energy storage

- cushion vital organs and insulate the body

69
Q

Compare and contrast saturated and unsaturated fats.

A
  • saturated fats have the maximum number of hydrogen atoms possible and no double bonds
  • unsaturated fats have one or more double bond
70
Q

What is an amphipathic molecule? What properties does it have?

A
  • an amphipathic molecule is a molecule that has a hydrophobic and hydrophilic sides
  • it has two fatty acid tails that are hydrophobic and a phosphate group head that is hydrophilic
71
Q

How do steroids differ from other fats?

A

steroids have four fused rings

72
Q

What are some purposes of fats, phospholipids, and steroids?

A
  • fats are for storage
  • phospholipids create cell membranes
  • steroids help membrane fluidity
73
Q

Where does the name amino acid come from? What is its structure?

A
  • Amino acid comes from the amino group and carboxyl group.

- Amino acids have an amino group, carboxyl group, and an R group.

74
Q

What does the ‘R’ group on an amino acid determine?

A

R group determines the properties of proteins.

75
Q

Describe the 4 levels of protein organization. Which levels are affected by the process of denaturation?

A
  • Primary structure: sequence of amino acids
  • Secondary structure: hydrogen bonds between repeating constituents create coils and folds
  • Tertiary structure: overall shape; caused by interactions between R groups
  • Quaternary structure: two or more polypeptide chains form one macromolecule
  • Tertiary and quaternary are the levels affected by the process of denaturation.
76
Q

What happens if proteins are folded incorrectly? Give examples of medical conditions related to misfolded proteins

A

If proteins are folded incorrectly it causes diseases, such as Alzeimher’s, Parkinson’s, and mad cow disease.

77
Q

What are the two types of nucleic acids? What are their names? How are they different?

What is the difference in sugars?
What is the difference in the bases?
What is the primary function of each?

A

Deoxyribonucleic acid and ribonucleic acid: DNA and RNA have one different nitrogenous base (Thymine versus Uracil)

  • DNA has deoxyribose as a sugar
  • RNA has ribose as a sugar
  • DNA has thymine
  • RNA has Uracil
  • DNA has long term storage of genetic information
  • RNA transfer genetic code
78
Q

How do DNA and RNA interact to produce proteins? Describe the “Flow of Information”

A

DNA provides direction for its own replication while DNA directs synthesis of messenger RNA (mRNA) , through mRNA, it controls protein synthesis - mRNA interacts with protein synthesis machine , so basically it goes DNA - RNA - Protein.

79
Q

Describe the 3 components of a nucleotide. What is the difference between a nucleoside and a nucleotide?

A
  • The three components of a nucleotide are a nitrogenous base, a pentose sugar, and one or more phosphate groups.
  • A nucleotide has a phosphate group while a nucleoside does not.
80
Q

What are the 5 nitrogenous bases?

A
  • adenine
  • guanine
  • thymine
  • cytosine
  • uracil
81
Q

Which bases are complementary between a) DNA strands b) DNA and RNA strands?

A

adenine and thymine
adenine and uracil
cytosine and guanine

82
Q

If DNA sequence is 5′-TAACGT-3′, what is the mRNA sequence?

A

5’ - AUUGCA - 3’

83
Q

How are nucleotide and peptide sequences used to determine evolutionary relationships among organisms?

A

Sequences of genes and their protein products document the hereditary background of an organism. Linear sequences of DNA molecules are passed from parents to offspring. We can extend the concept of “molecular genealogy” to relationships between species.