Exam 1 (Chapters 1-4) Clinical Scenarios and Notes Flashcards
Linkage Disequilibrium
Neutral and non-neutral SNPs causing the genetic factor
Difference between SNP and CNV
SNPs are single nucleotide positions, but CNV can involve 1000-1 million base pairs
Epigenetics
Heritable changes in gene expression not caused by alterations in DNA sequence
Chromatin Writer Complexes
Methylation, Acetylation, and Phosphorylation
“Mark” the histones
Naked DNA is ____ long, packed down to be ____
1.8 m
7-8 micrometers
Pathway of miRNA
MiRNA –> pri-miRNA –> pre-miRNA (exits the nucleus) –> DICER –> miRNA –> splits and joins RISC complex
Always causes gene silencing
Actions of the Long Noncoding RNA (lncRNA)
Gene activation
Gene suppression
Promote chromatin formation
Assembly of protein complexes
XIST is an example of:
LncRNA actions
Inactivated X chromosomes physiologically
Phosphatidylserine is responsible for:
- changing platelet shape
- flips to extracellular surface during apoptosis
Phosphatidylinositol is responsible for:
- scaffolding on the inner membrane
- generates secondary signals like DAG and IP3
What is flippase responsible for?
Maintains asymmetry of the plasma membrane
Insertion of proteins into the membrane may happen with these types of anchors?
Glycosylphosphatidylinositol (GPI) anchors
Glycocalyx
Chemical and mechanical barrier between cells - made up of carbohydrates
Caveolae-mediated endocytosis:
SMALL molecules taken up by invagination
Major protein: calveolin
Subset: POTOCYTOSIS
Receptor mediated endocytosis:
BIG molecules taken by binding surface receptors and internalized
Major protein: clathrin proteins –> form a clathrin coated pit –> clathrin coated vacuole –> bind to an endosome, then lysosome
Subset: PINOCYTOSIS
Which receptor-mediated pathway aides in increased vascular permeability?
Transcytosis
Process of Phagocytosis
Invagination of membrane (to engulf microbe, etc)
Formation of phagosome
Combines with lysosome –> phagolysosome
Dumps out digested material
Actin Microfilaments
G-actin is the MOST ABUNDANT cytosolic protein
Muscle cells: myosin binds to actin
Non-muscle cells: controls shape and movement
Intermediate Filaments
Mainly: Structural proteins (hair and skin)
Lamin A, B, C
Important for nuclear transcription
Vimentin
Fibroblasts and other mesenchymal cells
Desmin
Muscle cells, form the scaffold for myosin/actin
Neurofilaments
Axons of neurons, giving strength and rigidity
Glial fibrillary acidic proteins
Glial cells around neuron