exam 1 Flashcards
biology unifies what
much of natural science
living systems are the most
complex chemical systems on earth
life is constrained by
the properties of chemistry and physics
science is
interdisciplinary (combines multiple fields)
7 characteristics of all living organisms
- composed of cells
- complex and ordered
- respond to their environment
- con grow, develop, and reproduce
- obtain and use energy
- maintain internal balance
- allow for evolutionary adaption
hierarchical system at cellular level
atoms, molecules, macromolecules, organelles, cells
hierarchical system at organismal level
tissues, organs, organ systems, organism
hierarchical system at population level
population, species, community, ecosystem, biosphere
what does science aim to do
understand the natural world through observation and reasoning
science begins with
observations, which makes it purely descriptive
deductive reasoning
uses general principles to make specific predictions
inductive reasoning
uses specific observations to develop general conclusions
systematic approach that scientists use to gain understanding of the natural world
observation, hypothesis formation, prediction, experimentation, conclusion
define hypothesis
possible explanation for an observation
requirements for a hypothesis
- must be tested to determine its validity
- often tested in many different ways
- allows for predictions to be made
- iterative (can be changed and refined with new data)
experiment description
tests the hypothesis, must be carefully designed to test only one variable at a time, consists of a test experiment and a control experiment
predictions
if…then, hypotheses should make predictions, predictions should provide a way to test the validity of hypotheses
2 philosophical approaches to science
reductionism and systems biology
reductionism
to break a complex process down into simpler parts
systems biology
focus on emergent properties that can’t be understood by looking at simpler parts
models in science
way to organize thought, parts provided by reductionist approach, model shows how they fit together, suggest experiments to test the model
scientific theory
a body of interconnected concepts, supported by much experimental evidence and scientific reasoning, expresses ideas of which we are most certain
example of how scientist develops a hypothesis and a theory gains acceptance
darwin and evolution
charles darwin
served as a naturalist on mapping expedition around coastal south america, 30 years of observation and study before publishing On The Origin of Species by Mean of Natural Selection
Darwin’s contribution
a mechanism, natural selection, on the beagle, he saw that characteristics of similar species varied from place to place
evidence for evolution
fossil record, earth’s age, mechanism for heredity, comparative anatomy, molecular evidence
homologous
same evolutionary origin but now differ in structure and function
analogous
structures of different origin used for the same purpose (butterfly and bird wings)
phylogenetic tree
based on tracing origin of particular nucleotide changes to reconstruct an evolutionary history
cell theory
all organism are composed of cells, cells are life’s basic units, all cells come from preexisting cells
molecular basis of inheritance
DNA, sequence of 4 nucleotides encode cell’s info
gene
discrete unit of info
genome
entire set of DNA instructions
continuity of life depends on
faithful copying of DNA into daughter cells
study what to learn function
structure
diversity of life arises by
evolution, underlying unity of biochem and genetics argues for life from the same origin event, diversity is due to evolutionary change over time
3 domains of life
- bacteria - single cell prokaryote
- archaea - single cell prokaryote
- eukarya - single cell or multicellular eukaryote
evolutionary conservation
all organisms today descended from a simple creature 3.5 BYA, conservation reflects they have a fundamental role
what are cells essientially
information processing systems
what is information in DNA used for
direct synthesis of cellular components
what does control of gene expression do
leads to different tissues and cell types
cells process
environmental info (glucose levels, presence of hormones)
what must cells in multicellular organisms do
coordinate with each other
nonequilibrium state
living systems are open, constant supply of energy needs, self-organizing properties at different levels, emergent properties from collections of molecules, cells, individuals
matter
has mass and occupies space, composed of atoms
atoms composed of
protons, neutrons, electrons
protons charge and location
positive charge, nucleus
neutrons charge and location
no charge, nucleus
electrons charge and location
negative charge, outside of nucleus in orbitals
atomic number
equal to the number of protons, every atom of a particular element has the same # of protons
number of protons
equals number of electrons
atoms are
electrically neutral
atom
substance that cannot be broken down into any other substance by ordinary chemical reactions
mass
refers to amt of substance
weight
refers to the force that gravity exerts on a substance
atomic mass
sum of the protons and neutrons
each proton and neutron has the mass of
1 dalton
ions
charged particles - unbalanced
cation
more protons than electrons, positive net charge
anion
more electrons than protons, negative net charge
isotopes
Atoms of a single element that possess different numbers of neutrons
radioactive isotopes
unstable and emit radiation as the nucleus breaks up
half-life
time it takes one half of the atoms in a sample to decay
electron arrangement is key to
chemical behavior of an atom lies in the number and arrangement of its electrons in their orbitals
bohr model
electrons in discrete orbits
define orbital
area around a nucleus where an electron is most likely to be found – no orbital can contain more than 2 electrons, drawn as rings
farther away electrons are from the nucleus,
more energy they have
what happens to the electron when energy is released and when it is absorbed?
when it is released, it drops energy levels - gets closer to the nucleus
when it is absorbed, it gains energy levels- gets further away from the nucleus
redox
electrons can be transferred from one atom to another through the process of reduction and oxidation (redox), keeping the energy of their position of the atom
reduction
gain of an electron
oxidation
loss of an electron
periodic table
displays elements according to valence electrons
valence electrons
number of electrons in the outermost energy level
what kind of elements have eight electrons
inert
octet rule
atoms tend to establish completely full outer energy levels
how many naturally occuring elements
90
how many elements are found in living organisms in substanial amts
12
how many elements make up 96.3% of human body weight
four
what 4 elements make up the human body
carbon, hydrogen, oxygen, nitrogen
molecules
groups of atoms held together in a stable association
compounds
molecules containing more than one type of element
how are atoms held together in molecules or compounds
chemical bonds
how are ionic bonds formed
by the attraction of oppositely charged ions.
how are ions formed
by gain or loss of electrons
what can disrupt forces holding ions together
electrical attraction of water molecules
covalent bonds
form when atoms share 2 or more valence electrons, no net charge, satisfies octet rule, no unparied electrons
strength of covalent bonds depend on
number of shared electrons
biological compounds are composed of
more than 2 atoms. they may share electrons with 2 or more atoms
electronegativity
atoms affinity for electrons, differences in electronegativity dictate how electrons are distributed in covalent bonds
polar covalent bonds
unequal sharing of electrons
chemical reactions
involve the formation or breaking of chemical bonds
reactants
original molecules
products
molecules resulting from the reaction
extent of chemical reaction influenced by what
- temp
- concentration of reactants and products
- catalysts
single most outstanding chemical property of water
its ability to form hydrogen bonds- weak chemical associations that form between the partially negative O atoms and the partially positive H atoms of 2 water molecules
in water, what atom is more electronegative
O
what charges are in water?
polar, O is partially negative, H is partially positive
cohesion
polarity of water allows water molecules to be attracted to one another
what is responsible for many of waters important physical properties
hydrogen bonds. each bond is weak and transitory, cumulative effects are enormous
properties of water
- high specific heat (large amt of energy is required to change the temp of water)
- water has a high heat of vaporization ( evaporation of water from a surface causes cooling of that surface)
- solid water is less dense than liquid water (bodies of water freeze from the top down)
- water is a good solvent (dissolves polar molecules and ions)
- organizes nonpolar molecules (causes hydrophobic molecules to aggregate or assume specific shapes)
- can form ions