Exam 1 Flashcards
(Q015) Table 2-14 indicates the number and arrangement of electrons in the first four atomic electron shells for selected elements. On the basis of the information in the chart and what you know about atomic structure, which elements will form ions with a net charge of +1 in solution?
A. Helium; neon
B. Magnesium; calcium
C. sodium; potassium
D. carbon; sulfur
C. sodium; potassium
(Q046) Macromolecules in the cell can often interact transiently as a result of noncovalent interactions. These weak interactions also produce stable, highly specific interactions between molecules. Which of the factors below is the most significant in determining whether the interaction will be transient or stable?
A. surface complementarity between molecules
B. the concentration of each molecule
C. the rate of synthesis
D. the size of each molecule
A. surface complementarity between molecules
(Q014) Table 2-14 indicates the number and arrangement of electrons in the first four atomic electron shells for selected elements. On the basis of the information in the chart and what you know about atomic structure, which elements are chemically inert?
A. helium; neon
B. magnesium; calcium
C. sodium; potassium
D. carbon; sulfur
A. helium; neon
(Q012) A covalent bond between two atoms is formed as a result of the
A. loss of a proton from one atom.
B. loss of electrons from both atoms.
C. transfer of electrons from one atom to the other.
D. sharing of electrons.
D. sharing of electrons.
(Q016) Table 2-14 indicates the number and arrangement of electrons in the first four atomic electron shells for selected elements. On the basis of the information in the chart and what you know about atomic structure, which elements will form ions with a net charge of +2 in solution?
A. helium; neon
B. carbon; sulfur
C. magnesium; calcium
D. sodium; potassium
C. magnesium; calcium
(Q020) Polar covalent bonds are formed when the electrons in the bond are not shared equally between the two nuclei. Which one of these molecules contains polar bonds?
A. molecular oxygen
B. water
C. propane
D. methane
B. water
(Q003) Which subatomic particles contribute to the atomic mass for any given element?
A. neutrons
B. protons
C. protons and neutrons
D. protons and electrons
C. protons and neutrons
(Q013) An ionic bond between two atoms is formed as a result of the
A. sharing of electrons.
B. loss of a proton from one atom.
C. loss of electrons from both atoms.
D. transfer of electrons from one atom to the other.
D. transfer of electrons from one atom to the other.
(Q042) Energy cannot be created or destroyed, but it can be converted into other types of energy. Cells harvest some of the potential energy in the chemical bonds of foodstuffs to generate stored chemical energy in the form of activated carrier molecules, which are often employed to join two molecules together in __________ reactions.
A. oxidation
B. dehydrogenation
C. hydrolysis
D. condensation
D. condensation
(Q013) The best way to know if an organic molecule has been reduced is to see if there was an increase in the number of __________ bonds.
A. H–H
B. C–H
C. C–N
D. C–O
B. C–H
(Q002) When there is an excess of nutrients available in the human body, insulin is released to stimulate the synthesis of glycogen from glucose. This is a specific example of a/an __________ process, a general process in which larger molecules are made from smaller molecules.
A. catabolic
B. biosynthetic
C. anabolic
D. metabolic
C. anabolic
(Q017) ΔG° indicates the change in the standard free energy as a reactant is converted to product. Given what you know about these values, which reaction below is the most favorable?
A. glucose + fructose → sucrose ΔG° = +5.5 kcal/mole
B. ADP + P → ATP ΔG° = +7.3 kcal/mole
C. glucose → CO + H O ΔG° = -686 kcal/mole
D. glucose 1-phosphate → glucose 6-phosphate ΔG° = -1.7 kcal/mole
C. glucose → CO + H O ΔG° = -686 kcal/mole
(Q015) Chemical reactions that lead to a release of free energy are referred to as “energetically favorable.” Another way to describe these reactions is
A. uncatalyzed.
B. activated.
C. spontaneous.
D. uphill.
C. spontaneous.
(Q018) Catalysts are molecules that lower the activation energy for a given reaction. Cells produce their own catalysts, called
A. proteins.
B. cofactors.
C. complexes.
D. enzymes.
D. enzymes.
(Q001) Chemical reactions carried out by living systems depend on the ability of some organisms to capture and use atoms from nonliving sources in the environment. The specific subset of these reactions that break down nutrients in food can be described as
A. anabolic.
B. metabolic.
C. catabolic.
D. biosynthetic.
C. catabolic.
(Q004) The energy used by the cell to generate specific biological molecules and highly ordered structures is stored in the form of
A. light waves.
B. heat.
C. chemical bonds.
D. Brownian motion.
C. chemical bonds.
Coiled coils are defined by all of the following EXCEPT:
A. Coiled coils are the hallmark of Alzheimer’s disease, forming the amyloid fibrils found in diseased brains.
B. they coil together due to their amphipathic nature
C. Two or even sometimes three heptad repeat coils wind together to form a superhelical bundle
D. they are comprised of “heptad repeats” where the 1st and 4th amino acids are hydrophobic
A. Coiled coils are the hallmark of Alzheimer’s disease, forming the amyloid fibrils found in diseased brains.
(Q023) Which of the following statements is TRUE?
A. Disulfide bonds are more common for intracellular proteins, compared to extracellular proteins.
B. Disulfide bonds are formed mainly in proteins that are retained within the cytosol.
C. Disulfide bonds are formed by the cross-linking of methionine residues.
D. Disulfide bonds stabilize but do not change a protein’s final conformation.
D. Disulfide bonds stabilize but do not change a protein’s final conformation.
Types of secondary structures found in proteins include all of the following EXCEPT:
A. alpha helix
B. beta sheet
C. phosphoryl group
D. coiled coil
C. phosphoryl group
(Q001) Polypeptides are synthesized from amino acid building blocks. The condensation reaction between the growing polypeptide chain and the next amino acid to be added involves the loss of
A. a carboxylic acid group.
B. an amino group.
C. a carbon atom.
D. a water molecule.
D. a water molecule.
(Q003) Complete the sentence with the best option provided below. The primary structure of a protein is the
A. lowest energy conformation.
B. amino acid composition.
C. average size of amino acid side chains.
D. amino acid sequence.
D. amino acid sequence.
(Q017) Two or three α helices can sometimes wrap around each other to form coiled-coils. The stable wrapping of one helix around another is typically driven by __________ interactions.
A. hydrophilic
B. ionic
C. van der Waals
D. hydrophobic
D. hydrophobic
Advantages of protein phosphorylation as a regulatory mechanism include all of the following EXCEPT:
A. It changes the chemical nature of S,T,Y, and H R-group sidechains from polar to basic in
nature.
B. it can trigger allosteric changes to alter activity
C. several different amino acids can be phosphorylated, meaning that a protein could be
regulated by different kinases and at different sites, increasing the potential complexity of
signaling
D. depending on the context, phosphorylation can be used to positively regulate or
negatively regulate a protein
A. It changes the chemical nature of S,T,Y, and H R-group sidechains from polar to basic in
nature.
Regulation of a protein’s activity by the binding of a small nucleotide such as ATP or GTP has all of the advantages below EXCEPT:
A. its small size allows it to diffuse rapidly to the protein, a key advantage to speed up “multi-step” processes
B. its binding can cause allosteric changes in the protein that regulate its activity
C. it modifies a single amino acid on the protein it regulates, increasing the number of different options for regulatory complexity if it can bind more than one site
D. it can positively or negatively regulate the protein’s interaction with other proteins, depending on the context
C. it modifies a single amino acid on the protein it regulates, increasing the number of different options for regulatory complexity if it can bind more than one site
Fluorescence recovery after photobleaching (FRAP) is a way to measure:
A. Mobility of a protein within the cell
B. The free energy of a protein.
C. The equilibrium constant for a given reaction
D. Change in the membrane potential.
A. Mobility of a protein within the cell
(Q019) Membrane synthesis in the cell requires the regulation of growth for both halves of the bilayer and the selective retention of certain types of lipids on one side or the other. Which group of enzymes accomplishes both of these tasks?
A. phospholipases
B. flippases
C. convertases
D. glycosylases
B. flippases
(Q033) Which mechanism best describes the process by which nutrients are taken up selectively at the apical surface of the epithelial cells that line the gut and released from their basal and lateral surfaces?
A. Proteins are tethered to the cell cortex.
B. Protein movement is limited by the presence of a diffusion barrier.
C. Proteins are tethered to the proteins on the surface of another cell.
D. Proteins are tethered to the extracellular matrix.
B. Protein movement is limited by the presence of a diffusion barrier.
(Q001) Which of the following is most likely to occur after the lipid bilayer is pierced?
A. The membrane expands.
B. The membrane reseals.
C. The membrane collapses.
D. A tear is formed.
B. The membrane reseals.
(Q017) Most animal fats form a solid at room temperature, while plant fats remain liquid at room temperature. Which of the following is a feature of lipids in plant membranes that best explains this difference?
A. higher levels of sterols
B. larger head groups
C. unsaturated hydrocarbons
D. longer hydrocarbon tails
C. unsaturated hydrocarbons
(Q006) Which of the following statements is TRUE?
A. Membrane lipids diffuse within the plane of the membrane.
B. In eukaryotes, all membrane-enclosed organelles are surrounded by one lipid
bilayer.
C. In an aqueous environment, the formation of liposomes by phospholipids requires energy.
D. Membrane lipids frequently flip-flop between one monolayer and the other.
A. Membrane lipids diffuse within the plane of the membrane.
(Q014) Membrane lipids are capable of many different types of movement. Which of these does not occur spontaneously in biological membranes?
A. rotation around the long axis of a fatty acid
B. moving between lipid layers
C. flexing of hydrocarbon chains
D. lateral movement
B. moving between lipid layers
(Q041) We can estimate the relative mobility of a population of molecules along the surface of a living cell by fluorescently labeling the molecules of interest, bleaching the label in one small area, and then measuring the speed of signal recovery as molecules migrate back into the bleached area. What is this method called?
A. SDS
B. SPT
C. FRAP
D. GFP
C. FRAP
Why does the part of the polypeptide chain that crosses the lipid bilayer of most transmembrane proteins usually exist as an alpha helix or beta barrel?
A. Because a rigid structure such as occurs with these conformations is needed to penetrate through a lipid bilayer.
B. Because in both an alpha helix or a beta barrel the polar peptide bonds of the polypeptide
backbone chain are H-bonded and completely shielded from the hydrophobic environment of the lipid bilayer by the hydrophobic amino acid side chains.
C. Because these secondary structures always form the correct length needed to traverse a lipid bilayer (20-24 amino acids)
D. Because both of these secondary structures are able to shield their polar groups away from the hydrophobic lipid bilayer due to the van der Waals forces.
B. Because in both an alpha helix or a beta barrel the polar peptide bonds of the polypeptide
backbone chain are H-bonded and completely shielded from the hydrophobic environment of the lipid bilayer by the hydrophobic amino acid side chains.
A similarity between symporters and antiporters is:
A. Both transporters are responsive to the membrane potential, opening once threshold is reached.
B. Both transporters couple the movement of two different solutes across the cell membrane.
C. Both transporters operate using passive transport mechanisms.
D. Both transporters are coupled to ATP hydrolysis to drive solute transport across the membrane.
B. Both transporters couple the movement of two different solutes across the cell membrane.
A transporter protein that is also described as a “pump”:
A. Always hydrolyzes ATP to function
B. Is specialized to allow ions to move through an open pore in response to a signal that triggers an allosteric change that opens the pore.
C. Operates via a passive transport mechanism to transport solutes from high concentration to low.
D. uses energy to transport a solute against its concentration or electrochemical gradient
D. uses energy to transport a solute against its concentration or electrochemical gradient.
(Q013) Pumps are transporters that are able to harness energy provided by other components in the cells to drive the movement of solutes across membranes, against their concentration gradient. This type of transport is called
A. free diffusion.
B. passive transport.
C. active transport.
D. facilitated diffusion.
C. active transport.