ex16h Flashcards

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1
Q

What is phosphorylation/dephosphorylation?

A

A mechanism where kinases add phosphate groups to proteins to activate/inhibit them, and phosphatases remove phosphate groups to reverse the effect.

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2
Q

How can transcription regulators be controlled in response to cellular stimuli?

A

Through phosphorylation, nuclear-cytoplasmic transport, ligand binding, ubiquitination, and protein-protein interactions.

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3
Q

What is epigenetic modification and its role in cell identity?

A

Changes like DNA methylation and histone modifications maintain gene expression patterns and are heritable across cell divisions.

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4
Q

How do transcriptional feedback loops maintain cell identity?

A

Self-reinforcing circuits ensure continued expression of lineage-specific genes, stabilizing cell identity.

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5
Q

What features make microRNA effective gene regulators?

A

Specificity, versatility, post-transcriptional regulation, fine-tuning, efficiency, and stability.

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6
Q

Why has phosphorylation become a prominent signaling mechanism?

A

It provides reversibility, speed, specificity, and allows for signal integration.

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7
Q

How does a single photon activate the rhodopsin receptor?

A

The photon causes rhodopsin to change conformation, activate transducin, reduce cGMP levels, and close cation channels.

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8
Q

How is rhodopsin returned to its resting state?

A

Through phosphorylation, arrestin binding, and restoration of cGMP by guanylyl cyclase.

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9
Q

What is actin treadmilling?

A

A process where actin filaments add ATP-actin at the plus end and lose ADP-actin at the minus end, maintaining a constant length.

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10
Q

What is a sarcomere, and how does it regulate muscle contraction?

A

The sarcomere is the functional unit of muscle contraction, with myosin sliding along actin filaments using ATP hydrolysis.

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11
Q

What steps are required for cell movement?

A

Protrusion of lamellipodia, adhesion via integrins, traction by myosin, and retraction of the rear.

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12
Q

What is Rac’s role in cell movement?

A

Rac promotes lamellipodia formation by regulating actin polymerization.

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13
Q

What is Rho’s role in cell movement?

A

Rho drives stress fiber formation and increases contractility for retraction.

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14
Q

What are the functions of caspases during apoptosis?

A

Initiator caspases activate executioner caspases, which cleave cellular components for controlled cell death.

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15
Q

How does the intrinsic apoptosis pathway operate?

A

It is triggered by mitochondrial cytochrome c release, forming the apoptosome and activating caspase-9.

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16
Q

How does DNA damage lead to apoptosis?

A

p53 activates pro-apoptotic proteins (Bax/Bak), which permeabilize mitochondria and trigger caspase activation.

17
Q

What is cohesin and its function?

A

A protein complex that holds sister chromatids together, ensuring proper chromosome segregation.

18
Q

What is the Ras oncogene?

A

A gene encoding a GTPase involved in cell signaling. Mutations cause constitutive activation, promoting cancer.

19
Q

What is a tumor suppressor gene?

A

A gene that inhibits uncontrolled cell proliferation. Loss of function leads to tumorigenesis.

20
Q

What is a morphogen?

A

A signaling molecule that forms gradients, directing cell fate during development.

21
Q

What is lateral inhibition, and how is it mediated by Notch signaling?

A

A process where Notch signaling ensures neighboring cells adopt different fates, crucial for tissue patterning.