Enzymes Flashcards
Enzymes
Control and regulate chemical reactions in cells, lower the energy barrier allowing chemical reactions to occur more quickly
Digestion
R group of amino acids lining the active site interact with the substrate which weakens the bonds within the substrate and lowers the activation energy required for the reaction
Lock and key model
Shape of the active site is complementary to the shape of the substrate molecule
Induced fit model
Shape of the active site changes when the substrate binds to it. The presence of the substrate induces a better fit
Structure
Pure proteins: folded with an active site (tertiary structure)
Some require other factors to become active:
Cofactors - non-protein (metallic ions)
Coenzymes - an organic cofactors (ie. vitamins)
Reaction rates
Substrate concentration: increase in substrate = increase in amount of product but not reaction rate
Enzyme concentration: increase in enzyme = increase in amount of product per unit time
Limiting factors
Saturation: all active sites are taken up and the rest of the substrate cannot be broken down until the sites are free
Reversible enzyme inhibition
Molecules bind to the enzyme non-covalently and can dissociate from the enzyme
- competitive reversible inhibition
- non-competitive reversible inhibition
Competitive reversible inhibition
Inhibitor competes directly with substrate
Non-competitive reversible inhibition
Inhibitor binds to enzyme away from the active site. It doesn’t block the substrate, but catalytic activity is inhibited as it won’t take place while the inhibitor is bound. Inhibitor causes a change of shape to the active site which decreases the likelihood of the substrate binding effectively
Irreversible enzyme inhibition
Inhibitors bind covalently to the enzymes active site and cause a permanent loss of catalytic activit
Protein secretion
- DNA is transcribed into mRNA
- mRNA and tRNA are translated
- mRNA, tRNA and ribosomes produce amino acids
- polypeptide is produced on ribosome
- polypeptide enters ER tubule where it’s modified
- polypeptide is enclosed in transport vesicle
- polypeptide is modified in Golgi complex
- protein is placed in transport vesicle
- protein transport vesicle fuses with plasma membrane
- exocytosis occurs
Changing the active site
Above optimum value: intermolecular binds as broken, leads to a loss of function
Below optimum value: reaction slows/does not occur