Enzymes Flashcards

1
Q

what type of proteins are enzymes

A

globular

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2
Q

what are the 2 main types of reactions that enzymes catalyse

A

anabolic and catabolic

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3
Q

what are anabolic reactions

A

smaller molecules synthesise into larger molecules (requires energy)

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4
Q

what are catabolic reactions

A

breakdown of larger molecules into smaller ones (releases energy)

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5
Q

what is metabolism

A

the sum of all reactions that take place within a cell/organism

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6
Q

what does the induced fit hypothesis suggest

A

the active site of the enzyme changes shape slightly as the substrate binds with it - which puts a strain on the bonds of the substrate molecule and lowers the activation energy for the reaction

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7
Q

what interactions are included in the tertiary structure of a protein

A

hydrogen bonds, ionic bonds, disulfide bridges and hydrophobic interactions

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8
Q

what are intracellular enzymes

A

site of action is within the cell (majority of enzymes)

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9
Q

give examples of intercellular enzymes

A

phosphorylases, catalase and ATPase

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10
Q

what are extracellular enzymes

A

site of action is outside the cells

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11
Q

give examples of extracellular enzymes

A

amylase, maltase and trypsin

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12
Q

how does temp affect enzyme activity

A

as temp increases, so does kinetic energy, more successful collisions, more e-s-c are formed
beyond optimum, strains on bonds break meaning tertiary structure changes and enzyme becomes denatured

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13
Q

what is temperature coefficient, Q10

A

a measure of how much the rate of reaction increases with a 10^C increase in temp

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14
Q

what is the optimum temp of thermus aquaticus and its biological uses

A

70^C
used in PCR

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15
Q

what is the optimum temp of psychophiles and their biological uses

A

0-10^C
detergent industry

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16
Q

what is the optimum temp of thermophiles and their biological uses

A

50-80^C
washing powder

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17
Q

what is the optimum temp of the human stomach and its biological use

A

37^C
break down of food molecules

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18
Q

how does pH affect enzyme activity

A

when pH differs slightly from optimum, active sit changes shape due to bonds breaking, if optimum pH is restored, it resumes its normal shape (renaturation)
if it differs significantly, it changes irreversibly (denaturation)

19
Q

suggest the optimum pH of salivary amylase

20
Q

suggest the optimum pH of pancreatic lipase

21
Q

suggest the optimum pH of pepsin

22
Q

suggest the optimum pH of pancreatic amylase

23
Q

suggest the optimum pH of trypsin

24
Q

how does substrate concentration affect enzyme activity

A

as substrate conc increases there are more successful collisions for more e-s-c form
however at a certain point, the point of saturaction, Vmax is reached and so substrate conc has no further affect

25
how does enzyme concentration affect enzyme activity
Vmax can be increased if the enzyme conc is increased as there are more active sites for substrate molecules to occupy - rate of reaction increases until a new Vmax is reached
26
how does competitive inhibition work
both the competitive inhibitor and the substrate have a similar shape to the active site so the c.i can bind to active site preventing the substrate from binding and forming an e-s-c only binds temporarily so effect is reversible
27
give examples of competitive inhibition
statins aspirin
28
how does non competitive inhibition work
n.c.i binds to enzyme at allosteric site causing the tertiary structure of the enzyme to change (bonds are disrupted) enzymes active site is no longer complementary to substrate (binds permanently0
29
give examples of non competitive inhibition
organophosphates proton pump inhibitors (PPIs)
30
how does end product inhibition work
the substrate forms an e-s-c and product is formed this product may directly act as an n.c.i meaning the enzymes active site is no longer complementary and reaction is inhibited
31
give an example of end product inhibition
PFK (phosphofructokinase) - during glycosis
32
what is a cofactor
a non-protein component of an enzyme that helps them carry out their catalytic function
33
what are the 2 types of cofactors
inorganic cofactors coenzymes
34
give examples of inorganic cofactors
iron ions, calcium ions, chloride ions, zinc ions
35
what are prosthetic groups
inorganic ions that tightly bind to an enzyme to activate them
36
give an example of a prosthetic group
zinc ions tightly binding to carbonic anhydrase to activate its role in metabolising CO2
37
what are coenzymes
organic molecules which do NOT bind permanently to enzymes
38
give examples of coenzymes
vitamin B3 (used to synthesise coenzyme NAD) vitamin B5 (used to synthesise coenzyme A)
39
what do CL- ions bind to
amylase
40
what do ZN2+ ions bind to
carbonic anhydrase
41
what are precursor enzymes
enzymes that are produced in an inactive form
42
how can precursors be activated
action of another enzyme environmental conditions
43
why is it important that pepsinogen ( a precursor) is not activated until it enters the stomach
to prevent it from digesting the stomachs own cells