Enzymes Flashcards

1
Q

Enzymes are _____ proteins with a specific _____ structure held together by ________ bonds, __________ _______, ______ bonds and _____________ interactions

A

Globular, tertiary, hydrogen, disulphide bridges, ionic, hydrophobic

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2
Q

What does “enzymes act as biological catalysts” mean?

A

They speed up the rate of metabolic reactions by lowering the activation energy

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3
Q

Where can enzymes work?

A

Inside our cells (intracellular) or outside our cells (extra cellular)

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4
Q

What are the 2 ways enzymes can catalyse metabolic reactions?

A

Anabolic reactions (a for adding) eg making a disaccharide
Catabolic reactions (c for cutting) eg breaking down a disaccaride

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5
Q

What are the 2 main models for enzyme action?

A

Lock and key model
Induced fit model

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6
Q

Describe how the lock and key model works

A
  • The substrate molecule fits into the active site of the enzyme molecule like a key fitting into a lock as they are complementary shapes.
  • This forms the enzyme substrate complex.
  • The product is then formed.
  • As it no longer fits into the active site it is released
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7
Q

Describe how the induced fit model works

A
  • The substrate and the active site of the enzyme are not complementary shapes
  • When a substrate molecule binds to the active site, the active site changes shape and fits itself around the substrate
  • This places a strain on the substrate molecule and distorts a particular bond, lowering the active energy required to break the bond
  • The products are formed and leave the active site which then returns to its original shape
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8
Q

What is an example of an induced fit enzyme?

A

Lysozyme

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9
Q

How does the enzyme lysozyme help to kill bacteria?

A

It catalyses the hydrolysis of sugars in the peptidoglycan cell walls. Cell walls are weakened. Water moves into the bacteria by osmosis causing them to burst. Found in secretions eg tears, saliva, human milk and in lysosomes.

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10
Q

State and explain the 3 properties of enzymes

A
  • Specific due to sequence of amino acids that make up their active site
  • Fast acting with very high turnover number They convert many molecules of substrate per unit time
  • Soluble as hydrophilic R groups are found on the outside of the molecule
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11
Q

Describe and explain enzyme controlled reaction graphs

A

Pages 5 and 6 of notebook

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12
Q

What are the 5 factors that can affect the rate of an enzyme controlled reaction?

A
  • Temperature
  • pH
  • Substrate concentration
  • Enzyme concentration
  • Inhibitors
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13
Q

Describe the effect of increasing temperature on enzyme action

A
  • Low temp - rate of reaction is low as enzymes and substrate molecules have low kinetic energy
  • Increasing temp up to optimum - increases rate of reaction as enzyme and substrate molecules have more kinetic energy increasing the chance of successful collisions. More enzyme substrate complexes are formed
  • Above optimum - rate of reaction decreases as molecules have more kinetic energy. Increasing vibrations begin to break hydrogen bonds, changing the tertiary structure of the enzyme which alters the shape of the active site so it is no longer complementary to substrate so less enzyme substrate complexes can form.
    At very high temperatures - rate of reactions falls to 0 as enzymes are denatured. Active site is permanently distorted by irreversible breaking of hydrogen bonds. No enzyme substrate complexes can form as substrate and active site no longer complementary shapes
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14
Q

What may happen if there is an extreme change in the pH?

A

It may alter the electrostatic charge on the side chains of the amino acids. The active site and the substrate may both have the same charge and the enzyme will repel the substrate.

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15
Q

Why would you add a buffer to an enzyme controlled reaction?

A

To maintain a constant pH

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16
Q

At a fixed enzyme concentration, what will happen to the rate of reaction as substrate concentration increases?

A

Rate of reaction will increase as there are more successful collisions and more enzyme active sites become occupied

17
Q

At a low substrate concentration, what is the limiting factor?

A

Substrate concentration as active sites are in excess

18
Q

At a high substrate concentration what is the limiting factor?

A

Enzyme concentration as active sites are all occupied

19
Q

What is a competitive inhibitor and how does it work?

A

They are similar in shape to the substrate.
They are complementary to the active site and bind to it, blocking the actual substrate from entering the active site so less enzyme substrate complexes can form
If the concentration of substrate increases, the effect of the inhibitor is reduced

20
Q

What is a non-competitive inhibitor and how does it work?

A

It is not a similar shape to the substrate. It binds to the allosteric site (point other than the AS)
This changes the shape of the enzyme and therefore the shape of the active site so its no longer complementary to the substrate. Enzyme molecule may be permanently damaged.
Eg cyanide

21
Q

What are immobilised enzymes?

A

Enzymes that are fixed, trapped or bound on an inert matrix

22
Q

Why do enzymes immobilised in beads have a lower rate of reaction than those immobilised on a membrane?

A

Some active sites are in the beads and the substrate will take time to diffuse into them, enzymes on a surface will have active sites that are more available to the substrate so higher reaction rate

23
Q

What are the 6 advantages of immobilised enzymes?

A
  • Enzymes are easily recovered for reuse
  • Product is not contaminated with the enzyme
  • Increased stability over a wider range of pH values
  • Increased stability over a range of temperatures, and enzymes denature at higher temperatures
  • Several enzymes with differing temperature or pH optima can bee used in one process
  • Enzymes can be easily added or removed giving greater control over the rate of reaction
24
Q

Uses of immobilised enzymes

A
  • Lactose free milk
  • Biosensors
  • High-fructose corn syrup