DNA structure 2 Flashcards

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1
Q

are the building blocks of nucleic acids

A

Nucleotides

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2
Q

Nucleotides are the building blocks of nucleic acids and consists of 3 components:

A

a nitrogenous base, pentose sugar and a phosphate group.

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3
Q

Two types of nitrogen bases are found

A

purines and pyrimidines

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4
Q

Purines

A

Double ringed

adenine (A) and guanine (G)

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5
Q

Pyrimidines

A

single ringed

cytosine (C), thymine (T) and uracil (U).

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6
Q

The base T, however, is only ever found in

A

DNA, while RNA has U in its stead

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7
Q

The pentose sugars from which DNA and RNA are made-up of are also different, resulting in their different names

A

RNA contains ribose, while DNA is made-up of deoxyriboses.

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8
Q

Difference between ribose and 2-Deoxyribose?

A

Ribose has an OH on carbon 2 and deoxyribose only has an H

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9
Q

Why 2-Deoxyribose

A

Carbon 2 has hydroxyl group replaced by a H atom

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10
Q

Nucleoside

A

nitrogen base plus pentose sugar

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11
Q

Nucleotide

A

Nucleoside + a phosphate group

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12
Q

Depending on the amount of phosphate groups that are attached to the nucleoside (1,2 or 3 respectively), the molecule can be called a…

A
nucleoside monophosphate (NMP)
nucleoside diphosphate (NDP) 
nucleoside triphosphate (NTP).
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13
Q

Polynucleotide

A

Nucleotides are joined to each other by a phosphate group linking the two sugars

The joining of two nucleotides forms a dinucleotide. Following the same logic trinucleotides, oligonucleotides (less than 30 nucleotides) and polynucleotides (more than 30) are formed.

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14
Q

Link between two nucleotides (polynucleotide)

A

phosphodiester bond

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15
Q

“Normal” DNA is made-up of extremely long

A

polynucleotide chains.

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16
Q

Explain the specific bonding in nucleosides/nucleotides

A
  1. The pentose sugar is always bonded to the base via carbon one.
  2. This is then attached to N1 of pyrimidine bases or N9 on purine bases
  3. Phosphate is always bonded to C5 of pentose sugar
17
Q

A nucleotide can also be called a

A

nucleoside mono-phosphate

18
Q
A
19
Q

What form of nucleotides act as precursors for nucleic acid synthesis ?

A

NTP - deoxynucleoside triphosphate

20
Q

ATP and GTP

A

Deoxyadenosine triphosphate

Deoxyguanine triphosphate

21
Q

why do ATP and GTP provide energy to the cell?

A

Due to the large amounts of energy involved in adding or removing the terminal phosphate from the molecule

22
Q

2 adjacent nucleotides are joined by a phosphodiester bond which is formed by:

A

The phosphoric acid moiety joining to 2 alcohols

- namely the 2 hydroxyl groups which were formally attached at positions C5 and C3 of the adjacent sugars

23
Q

what direction is a phosphodiester bond

A

3’ to 5’ phosphodiester bond

24
Q

Base composition studies performed by

A

Chargaff

25
Q

Base composition studies showed:

A

that DNA contained equal amounts of adenine and thymine molecules, while the amounts of cytosine and guanine correlated.
Additionally, the sum of the purines (A + G) are equal to the sum of the pyrimidines (C + T).
In contrast, the ratio (A + T)/(C + G) does not necessarily equal one.

This is is because A binds only to T and C binds only to G

26
Q

The final solution to understanding the DNA structure (double helix) was provided by X-ray diffraction…

A

Rosland franklin

27
Q

How does RNA structure differ from DNA?

A

Ribose instead of deoxyribose
Uracil instead of thymine
Single stranded, linear molecule
Three types of RNA - with different functions

28
Q

Three types of RNA

A
ribosomal RNA (rRNA), 
messenger RNA (mRNA) 
transfer RNA (tRNA)