DNA & Proteins Flashcards

1
Q

What is a primary protein structure?

A

A linear sequence of amino acids linked by peptide bonds, determines 3D configuration.

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2
Q

What is a secondary protein structure?

A

The alpha helix and beta-pleated sheet.

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3
Q

What is a tertiary protein structure?

A

Overall 3D conformation of protein.

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4
Q

What is a quaternary protein structure?

A

3D structure of a protein composed of multiple subunits.

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5
Q

What is haploinsufficiency?

A

Half the amount of protein product is produced.

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6
Q

What is Knudson’s two hit hypothesis?

A

Where a normal gene just needs 1 mutation for abnormal protein to by produced by both.

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7
Q

Properties of a peptide bond?

A

Very stable, flexible around carbons, partial double bond, usually 1 preferred conformation.

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8
Q

What are the 5 forces holding proteins together?

A

Van der Waal, hydrogen, hydrophobic, ionic, disulphide.

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9
Q

What are immunoglobulins?

A

Antibodies that are large, Y-shaped protein produced mainly by plasma cells that is used by the immune system to neutralize pathogens such as pathogenic bacteria and viruses.

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10
Q

How many bonds can A-T make?

A

2

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11
Q

How many bonds can G-C make?

A

3

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12
Q

Which direction does DNA polymerase read DNA

A

5’-3’ Direction.

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13
Q

What is RNA primer?

A

Adds an additional RNA primer that gives DNA polymerase a starting point.

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14
Q

What are the 2 strands of DNA called once opened?

A

Leading and lagging strand.

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15
Q

What does P53 do?

A

Detects DNA damage and initiates repair mechanisms, pauses cell cycle until repair is carried out, if not fixed it commands call to commit suicide.

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16
Q

What are the 4 bases in DNA?

A

adenine (A), cytosine (C), guanine (G), or thymine (T).

17
Q

What are tge 4 bases in RNA?

A

Adenine, Guanine, Uracil and Cytosine

18
Q

Which base is swapped in RNA

A

Thymins in DNA is swapped for uracil in RNA

19
Q

What are the 2 parts of protein synthesis?

A

Transcription and translation.

20
Q

What is transcription?

A

Transcription is the first step in gene expression. It involves copying a gene’s DNA sequence to make an RNA molecule.
Transcription is performed by enzymes called RNA polymerases, which link nucleotides to form an RNA strand (using a DNA strand as a template).

21
Q

What are the 3 steps of transcription?

A

Initiation: RNA polymerase binds to a sequence of DNA called the promoter once bound, RNA polymerase separates the DNA strands, providing the single-stranded template needed for transcription.
Elongation: One strand of DNA, the template strand, acts as a template for RNA polymerase. As it “reads” this template one base at a time, the polymerase builds an RNA molecule out of complementary nucleotides.
Termination: Sequences called terminators signal that the RNA transcript is complete. Once they are transcribed, they cause the transcript to be released from the RNA polymerase.

22
Q

What is translation?

A

In translation, the codons of an mRNA are read in order (from the 5’ end to the 3’ end) by molecules called transfer RNAs, or tRNAs.
Each tRNA has an anticodon, a set of three nucleotides that binds to a matching mRNA codon through base pairing. The other end of the tRNA carries the amino acid that’s specified by the codon.

23
Q

What are the 3 steps of translation?

A

Initiation (“beginning”): in this stage, the ribosome gets together with the mRNA and the first tRNA so translation can begin.
Elongation (“middle”): in this stage, amino acids are brought to the ribosome by tRNAs and linked together to form a chain.
Termination (“end”): in the last stage, the finished polypeptide is released to go and do its job in the cell.

24
Q

What are the 2 types of nucleic acid and what are their functions?

A

DNA, RNA. Responsible for storage, expression, transmittion of genetic information.

25
Q

Triplets that dont specify for amino acids are called?

A

‘Stop signals’

26
Q

The _____ deicdes which DNA strand is used?

A

Promoter

27
Q

A 3 base sequence in RNA that specifies for an amino acid is called a ____?

A

Codon

28
Q

What are coding and non coding sequences called?

A

Coding: Exons

Non coding: Introns

29
Q

What happens in splicing?

A

Removal of introns, after splicing RNA is called mRNA. Occurs in the nucleus and is performed by proteins and RNA known as a spliceosome.

30
Q

tRNA 3 letter code sequence is called an ____?

A

Anticodon