DNA Flashcards

1
Q

What are the three main components of a nucleic acid monomeric unit?

A

A nitrogenous base, a sugar scaffold (deoxyribose in DNA or ribose in RNA), and a phosphate group.

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2
Q

What is the difference between a nucleoside and a nucleotide?

A

A nucleoside consists of a sugar and a base, while a nucleotide includes a sugar, a base, and a phosphate group.

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3
Q

What are the nitrogenous bases found in DNA?

A

Adenine (A), Thymine (T), Guanine (G), and Cytosine (C).
uracil in RNA

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4
Q

What type of bond holds the complementary bases in DNA together?

A

Hydrogen bonds.

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5
Q

Describe the structure of DNA.

A

DNA is a double helix with two complementary, anti-parallel strands that form a right-handed helix.

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6
Q

What role do hydrophobic interactions and hydrogen bonds play in DNA structure?

A

They stabilize the double helix structure of DNA.

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7
Q

In which direction is DNA synthesized?

A

DNA is synthesized in the 5’ to 3’ direction.

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8
Q

What is the significance of the major and minor grooves in DNA?

A

They facilitate interactions with certain DNA-binding proteins.

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9
Q

How is eukaryotic DNA packaged within the cell nucleus?

A

It is packaged into chromatin, where DNA is wrapped around nucleosomes made up of histone proteins.

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10
Q

What is the role of histone H1 in DNA packaging?

A

Histone H1 helps in winding DNA and spacing nucleosomes.

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11
Q

What is the nucleosome, and what is its composition?

A

The nucleosome is the core unit of chromatin, composed of an octamer of histone proteins (H2A, H2B, H3, and H4).

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12
Q

What enzyme unwinds the DNA double helix during replication?

A

helicase

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13
Q

Explain the concept of “semi-conservative replication” in DNA.

A

each strand of the original DNA serves as a template for the synthesis of a new complementary strand, resulting in two daughter strands each containing one parental strand.

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14
Q

What enzyme synthesizes new DNA strands during replication?

A

DNA polymerase delta (Pol δ).

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15
Q

What is the role of DNA polymerase alpha (Pol α) in replication?

A

It synthesizes a short RNA primer required to initiate DNA synthesis.

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16
Q

What is the difference between the leading and lagging strands in DNA replication?

A

The leading strand is synthesized continuously toward the replication fork, while the lagging strand is synthesized in short segments away from the fork.

17
Q

How are the short segments on the lagging strand joined together?

A

DNA ligase.

18
Q

What are the four basic genetic processes involved in macromolecular synthesis?

A

DNA Replication - the process of copying DNA to produce two identical molecules.
Transcription - the synthesis of RNA from a DNA template.
Translation - the process of synthesizing proteins from RNA.
Gene Regulation - the mechanisms that control the expression of genes.

19
Q

How does DNA replication ensure fidelity?

A

ase Pairing Rules: Specific pairing (A-T and C-G) reduces errors.
Proofreading Activity: DNA polymerase has exonuclease activity that allows it to remove incorrectly paired nucleotides during replication.
Repair Mechanisms: Post-replication repair systems identify and correct any remaining errors.

20
Q

what are the different ways of gene regulation

A

Transcription Factors: Proteins that enhance or inhibit transcription by binding to specific DNA sequences.

Epigenetic Modifications: Chemical changes to DNA or histones that affect gene activity without altering the DNA sequence.

Acetylation: The addition of acetyl groups to histones, which relaxes chromatin structure, making DNA more accessible for transcription. Acetylation typically enhances gene expression.

Methylation: The addition of methyl groups to DNA or histones, which can suppress gene expression by making DNA less accessible.

Feedback Mechanisms: Regulatory pathways that adjust gene expression in response to internal and external signals, helping maintain cellular homeostasis.

21
Q

What is gene regulation, and how does acetylation play a role in it?

A

refers to the processes that control the expression of genes, including:

Acetylation: The addition of acetyl groups to histones, which relaxes chromatin structure, making DNA more accessible for transcription. Acetylation typically enhances gene expression.

22
Q
A