Diagnostic Virology Flashcards

1
Q

What is a maculopapular rash?

A

Some areas are raised and some areas are flat

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2
Q

What is a dermatomal distribution of a rash indicative of?

A

Shingles or herpes

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3
Q

What can be used in virus detection?

A

Virus isolation and electron microscopy to visualise the virus itself Protein components (antigens) Genetic components (RNA or DNA) The host response (antibody or cell responses)

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4
Q

What is the main method of virus detection?

A

PCR

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5
Q

What technique is used for antibody detection?

A

Enzyme immunoassay – detects antibodies and antigens

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6
Q

Define sensitivity.

A

Low rate of false negatives

The ability of the test to identify everyone with the disease

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7
Q

Define specificity.

A

Low rate of false positives

The ability of the test to identify everyone without the disease

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8
Q

What does quantification of the genomes allow assessment of?

A

Viral load - used in HIV

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9
Q

What is the difference between IgM and IgG in terms of when theirlevels rise following infection?

A

IgM is a marker of RECENT infection IgG rises later on in the infection and some remains after the infection has passed

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10
Q

What does positive IgG and absent IgM indicate?

A

Past infection or immunisation

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11
Q

What is targeted in the detection of HIV?

A

Antibody and p24 antigen

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12
Q

What other investigations are performed on people who are identified as HIV positive?

A

Typing (HIV 1 or HIV2) Repeat blood sample and EDTA blood for HIV viral load (for genotyping and baseline resistance testing)

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13
Q

What test is used to confirm a positive IgM result?

A

Antibody avidity testing

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14
Q

Describe how antibody avidity changes in infection.

A

Early on in the infection, avidity is LOW Then you get maturation of the antibody response so the avidity will increase over a period of 3-6 months If you have HIGH antibody avidity, then it is unlikely that the infection occurred in the last 3 months

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15
Q

What is immunofluorescence useful for?

A

Direct detection of viral antigens

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16
Q

What is the term given to the method of PCR that allows testing for more than one virus using a single test tube?

A

Multiplex PCR

17
Q

What 4 things are sampled when testing for meningitis/encephalitis?

A
  • CSF
  • Stools​ and throat swab (for enterovirus detection)
  • Blood
18
Q

What is sampled when testing for causes of diarrhoea/vomiting?

A

Stool (and vomit)

19
Q

What must happen first before PCR is performed to identify the genome of an RNA virus?

A

The RNA must be reverse transcribed by reverse transcriptase to dsDNA dsDNA is the start point of PCR

20
Q

Describe the process of PCR.

A

The dsDNA is denatured by heating it The primers then bind to the single stranded DNA and Taq polymerase joins complementary nucleotides to the template strand

21
Q

What are the applications of sequencing viral genomes?

A

Antiviral resistance testing Phylogenetic analysis