Development Flashcards

1
Q

Describe fate, specified and determined in the context of stem cell development

A

Fate describes what groups of cells will normally develop info
Specified is when a group of cells can be isolated and cultured in a neutral environment and develop into their normal fate
Determined is when a group of cells still develop into their normal fate when transferred to a different region of the embryo, ie. They are immune to other influences in the new location

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2
Q

How are cells determined?

A

A result of induction
Result of synchronised changes that occur through interaction between two or more cells with distinct cell histories
Need the correct induction and competent receiver

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3
Q

Describe other types of inductive events

A

Epithelial-mesenchymal interaction
Epithelial are sheets or tubes of connected cells
Mesenchymal are loosely packed unconnected cells
Involved in the induction of cutaneous structures
Eg. Chick epidermis secretes a protein to the underlying dermal cells to form condensations ➡️ the dermal condensations turn the signal back to form epidermal structures that form over the condensed mesenchyme

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4
Q

What mediates induction?

A

Paracrine diffuse signal to many neighbouring cells

Juxtacrine relies on direct physical communication so can only contact immediate neighbours

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5
Q

Describe the importance of notch in drosophila

A

Dominant mutation where the loss of one copy leads to notching of adult wings
Loss of both copies is embryonic lethal because loss of notch leads to hypertrophy of the nervous system
Loss of notch triggers over-production of sensory bristles in the adult and failure To maintain appropriate spacing

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6
Q

Describe notch

A

Notch is a cell surface protein
Interacts with either delta or serrate in fruit fly or delta-like 1,3,4 and jagged1 in humans
Notch binding requires EGF repeat 11 and 12

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7
Q

Describe the concept of the epigenetic landscape

A

As development progresses organisational complexity increases
Cell fate is referred to as stably conferred

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8
Q

How does notch signalling activate transcription?

A

Notch is cleaved upon binding of ligands
To liberate the notch intracellular domain (ICD) two sequential proteolytic events occur
1. Cleaved in the extracellular domain by TACE
2. Cleaved in the transmembrane domain by gamma-secretase
Once the notch intracellular domain is liberated by cleavage it is trafficked to the nucleus and binds to the transcription factor CSL which is bound to the repressor protein NCoR
ICD binding to CSL displaces co repressors and recruits transcription co-activators to activate transcription

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9
Q

What are the targets of notch signalling in humans?

A

Hairy enhancer of split family of genes (HES)

They are basic helix-loop-helix transcription factors

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10
Q

Describe GES genes

A

Contain an N-terminal bHLH domain
Bind to DNA as homo- or Herero-dimers with other HES proteins
Recognise the E box sequence
Each bHLH of the dimer recognises half of the sequence
C-terminal WRPW motif recruits the co-repressor Groucho
HES genes are transcriptional repressors

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11
Q

Summarise the result of notch activations

A

Notch engagement➡️ICD liberation➡️CSL switched to activate transcription➡️HES gene transcription➡️ represses developmental regulators

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12
Q

What is neural patterning using an example from Drosophila and and how is notch involved?

A

Fly have sensilla and the cells that have the competence to form them express pro neural genes, which is initially broad forming proneural clusters
However expression is progressively limited to one cell in the cluster that then produces the sensilum
Notch controls restriction of proneural gene expression

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13
Q

Describe lateral inhibition by notch

A

Delta expressed on one cell interacts with the notch expressed on a neighbouring cell activating the notch pathway, eventually repressing notch
Neighbouring cells are engaged in competitive interaction
Slight differences in delta expression are amplified and one cell ‘wins’ activating the notch pathway in neighbouring cells repressing proneural genes

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14
Q

Describe Fringes role in boundary formation in the wing of the drosophila

A

Notch can be glycosylated in the ER of the cells express glycosyltransferase enzyme
Glycosylation of the notch ECF domains affects interaction with ligands
BLOCKS serrate
ENHANCES delta
Fringe catalyses the addition of the second of four sugar groups
Fringe is expressed in the dorsal compartment of the wing with serrate
Delta is expressed in the central compartment of the wing
Fringe restricts delta binding to the boundary of the dorsal and central surfaces allowing the wing margin to form

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15
Q

Describe an example of boundaries mediated my notch in mammals

A

The boundaries between somites
Gene targets in the notch signalling pathway eg. hes1, hes7 and lunatic fringe are expressed in an oscillating pattern within the pre-somitic mesoderm, sweeping anteriorly
As more anterior cells express hes1/7 less caudal cells do so the wave of expression narrows as it moves up the PSM until only a small band of cells email that mark the future posterior region of the somite

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16
Q

Describe the clock and waveform model

A

The primitive node is a source of a morphogen Fgf8 that inhibits somite formation in he PSM
As the node regresses the more anterior cells escape this inhibition
When coupled with oscillating activation of the notch pathway and hes1/7 expression the regression of the primitive node allows the regular progressive addition of pairs of somites

17
Q

Describe paracrine signalling

A

Secretes morphogens to neighbouring cells
Cells further away receive a lower concentration of morphogen
A concentration gradient forms from source to sink
If cells respond differently according to the level of the morphogen different cell fates can be achieved across the gradient

18
Q

Describe the signals that cause the differentiation of the somites

A

Wnt signalling from the neural tube and epidermis induces differentiation of the dermatome and the myotome
Dermatome- by neurotrophin 3 and Wnt1 by the neural tube
Myotome- epaxial myoblasts by Wnt1 and Wnt3a
-hypaxial myoblasts by Wnt from the epidermis and BMP4 from the lateral plate mesoderm

19
Q

What is the significance of Wingless?

A

It is a morphogen
It exhibits graded distribution of protein and graded responses in surrounding cells
The presence of Wingless prevents epidermal cells from developing denticles; specialised hook structure normally developed in each abdominal segment of the drosophila larvae
In the absence of Wingless the margin is not formed and the wing does not expand

20
Q

Describe the Wingless signalling pathway

A

Receptor- Frizzled (+LRP) ➡️Dishevelled➡️-Shaggy(+Apc+Axin)➡️ Armadillo➡️TCF➡️target genes transcribed
(If the pathway is not activated Shaggy will phosphorylate Armadillo which will be degraded by proteosomes

21
Q

How is the Hunan Wnt pathway different from the drosophila Wingless pathway?

A

GSK3 instead of Shaggy

Beta-catenin instead of Armadillo

22
Q

Describe the properties of the receptor in the Wnt signalling pathway

A

Frizzled in the core receptor- seven-pass transmembrane protein
-probably a G-protein coupled receptor
LRP is a co-receptor for Wnt- stabilises interaction

23
Q

Describe the properties of the transducer in the Wnt signalling pathway

A

Beta-catenin is a cytoplasmic-nuclear signalling mediator
Contains a tandem lay repeated 40 as motif that forms a superheli with a positively charged groove that provides an interaction surface with binding partners
Stability is controlled by phosphorylation by GSK3 so it is degraded by a destruction complex including APC-Axin

24
Q

Describe the control of beta-catenin stability

A

Axin provides scaffold for the destruction complex
Beta-care in is phodphorylated by casein kinase 1alpha at Ser45
GSK3 successively phosphorylates Thr41, Ser37 and Ser33
Phosphorylated beta-catenin is bound by beta-TRPC (a ubiquitin ligase)
Ubiquitination of beta-catenin targets it for proteosome-dependent degradation
APC regulates the transition from phosphorylation to ubiquitination

25
Q

How does beta-catenin affect Wnt target genes?

A

In the absence of Wnt signalling TCF binds a co-repressor Groucho and represses transcription
Binding if beta-catenin to TCF switches it to a transcriptional activator

26
Q

Give some categories and examples of target genes of Wnt signalling

A

Cell cycle regulators- C-Myc, Cyclin D1
Tissue specific genes
Tissue remodelling genes- Matrix metalloproteinases, Ephrin receptors and ligands, adhesion molecules
Angiogenesis- VEGF

27
Q

Give a brief example of Wnt signalling controlling stem cell renewal

A

Wnt signalling is required to maintain crypt progenitors
Slowly dividing stem cells reside at the bottom of the crypt and generate rapid dividing ‘transit-amplifying’ crypt cells that differentiate into villus cells as they move away from the source of Wnt signalling

28
Q

What is the significance of Wnt in cancer?

A

Wnt target genes control cell cycle, structure Nd angiogenesis- components of cancer
Aberrant Wnt signalling leads to cancer eg, familial adenomatous polyposis patients carry one mutant copy of APC
Mutant APC leads to nuclear accumulation of beta-catenin and deregulation of Wnt signalling triggering aberrant proliferation