Definitions Unit 4 Flashcards
Autotrophic
Organisms that make complex organic compounds from simple compounds in the environment
Photosynthesis
The process by which living organisms, particularly plants and algae, capture the energy of the Sun using chlorophyll and use it to convert carbon dioxide and water into simple sugars
Heterotrophic
Organisms that obtain complex organic molecules by feeding on other living organisms or their dead remains
Adenosine triphosphate (ATP)
A nucleotide that acts as the universal energy supply in cells. It is made up of the base adenine, the pentose sugar ribose and three phosphate groups
ATPase
The enzyme which catalyses the formation and breakdown of ATP, depending on the conditions
Adenosine diphosphate (ADP)
A nucleotide formed when a phosphate group is removed from ATP, releasing energy to drive reactions in the cell
Reduction/oxidation reactions (redox reactions)
Reactions in which one reactant loses electrons (is oxidised) and another gains electrons (is reduced)
Electrón transport chain
A series of electron-carrying compounds along which electrons are transferred in a series of oxidation/ reduction reactions, driving the production of ATP
Chloroplast envelope
The outer and inner membranes of a chloroplast including the intermembrane space
Grana
Layers of thylakoid membranes within a chloroplast
Thylakoids
Membrane discs found in the grana of a chloroplast
Lamellae
Extensions of the thylakoid membranes which connect two or more grana and act as a supporting skeleton in the chloroplast; they maintain a working distance between the grana so that these receive the maximum light and function as efficiently as possible
Stroma
The matrix which surrounds the grana and contains all the enzymes needed to complete the process of photosynthesis and produce glucose
Chlorophyll α
A blue-green photosynthetic pigment, found in all green plants
Chlorophyll β
A yellow-green photosynthetic pigment
Carotenoids
Photosynthetic pigments consisting of orange carotene and yellow xanthophyll
Phaeophytin
A grey pigment which is produced by the breakdown of the other photosynthetic pigments
Absorption spectrum
A graph showing the amount of light absorbed by a pigment against the wavelength of the light
action spectrum
A graph demonstrating the rate of photosynthesis against the wavelength of light
Rf value
The ratio of the distance travelled by the pigment to the distance travelled by the solvent alone when pigments are separated by chromatography
Photosystem l (PSI)
A combination of chlorophyll pigments which absorbs light of wavelength 700nm and is involved in cyclic and non-cyclic photophosphorylation
Photosystem ll (PSII)
A combination of chlorophyll pigments which absorbs light of wavelength 680nm and is involved only in non-cyclic photophosphorylation
Light-dependent reactions
The reactions that take place in the light on the thylakoid membranes of the chloroplasts; the reactions produce ATP and break down water molecules in a photochemical reaction, providing hydrogen ions to reduce carbon dioxide and produce carbohydrates
Light-independent reactions
The reactions that use the reduced NADP and ATP produced by the light-dependent stage of photosynthesis in a pathway known as the Calvin cycle; this occurs in the stroma of the chloroplast and results in the reduction of carbon dioxide from the air to cause the synthesis of carbohydrates
Photochemical reaction
A reaction initiated by light
Cyclic photophosphorylation
A process that drives the production of ATP; light-excited electrons from PSI are taken up by an electron acceptor and transferred directly along an electron transport chain to produce ATP, with the electron returning to PSI
Non-cyclic photophosphorylation
A process involving both PSI and PSII in which water molecules are broken into smaller units using light energy to provide reducing power to make carbohydrates and at the same time produce more ATP
Photolysis
The breaking down of a molecule into smaller units using light
Calvin cycle
A series of enzyme-controlled reactions that take place in the stroma of chloroplasts and result in the reduction of carbon dioxide from the air to bring about the synthesis of carbohydrate
Ribulose bisphosphate (RuBP)
A 5-carbon compound that combines with carbon dioxide from the air in the Calvin cycle to fix the carbon dioxide and form a 6-carbon compound
Ribulose bisphosphate carboxylase/oxygenase (RUBISCO)
A rate-controlling enzyme that catalyses the reaction between carbon dioxide/oxygen and ribulose bisphosphate
Glycerate 3-phosphate (GP)
A 3-carbon compound thought to be the result of breakdown of a theoretical highly unstable 6-carbon compound formed as a result of the reaction between RuBP and carbon dioxide in the Calvin cycle
Glyceraldehyde 3-phosphate (GALP)
A 3-carbon sugar produced in the Calvin cycle using reduced NADP and ATP from the light-dependent stage; GALP is the key product of photosynthesis and is used to replace the RuBP needed in the first step of the cycle, in glycolysis and the Krebs cycle, and in the synthesis of amino acids, lipids, etc. for the plant cells
Photorespiration
The alternative reaction catalysed by RUBISCO in a low carbon dioxide environment which uses oxygen and releases carbon dioxide, making photosynthesis less efficient
Gluconeogenesis
The synthesis of glucose from non-carbohydrates
Limiting factor
The faster needed for a reaction to progress that is closest to its minimum value
Abundance
The relative representation of a species in a particular ecosystem
Ecosystem
An environment including all the living organisms interacting within it, the cycling of nutrients and the physical and chemical environment in which the organisms are living
Habitat
The place where an organism lives
Microhabitat
A small area of a habitat
Population
A group of organisms of the same species, living and breeding together in a habitat
Population
A group of organisms of the same species, living and breeding together in a habitat
Community
All the populations of all the different species of organisms living in a habitat at any one time
Niche
The role of an organism within the habitat in which it lives
Predator
An organism which hunts and eats other organisms
Predator
An organism which hunts and eats other organisms
Abiotic factors
The non-living elements of the habitat of an organism
Biotic factors
The living elements of a habitat that affect the ability of a group of organisms to survive there
Prey
An organism which is hunted and eaten by other organisms
Prey
An organism which is hunted and eaten by other organisms
Biosphere
All of the areas of the surface of the Earth where living organisms survive
Biomes
The major ecosystems of the world
Succession
The process by which the communities of organisms colonising an area change over time
Succession
The process by which the communities of organisms colonising an area change over time
Colonisation
The process by which new species spread to new areas
Opportunists/pioneer species
Species which are the first to colonise new or disturbed ecosystems
Climax community
A self-sustaining community with relatively constant biodiversity and species range. It is the most productive group of organisms that a given environment can support long term
Climatic climax community
The only climax community possible in a given climate
Plagioclimax
A climax community that is at least in part the result of human intervention
Microclimate
A small area with a distinct climate that is different from the surrounding area
Edaphic factors
Factors that relate to the structure of the soil
Leaching
The loss of minerals from soil as water passes through rapidly
Density-independent factors
Factors affecting the number of organisms occupying a niche which are the same regardless of population size
Density-dependent factors
Factors affecting the number of organisms occupying a niche which are dependent on the number of organisms in a specific area
Intraspecific competition
Competition between members of the same species for a limited resource
Interspecific competition
Competition between different species within a community for the same resources
Abundance
The relative representation of a species in a particular ecosystem
Distribution
Where a species of organism is found in the environment and how it is organised
Quadrat
A sample area used in practical ecology, often measured using a square frame divided into sections that you lay on the ground
Individual counts
A measure of the number of individual organisms in an area
Percentage cover
The area covered by the above-ground parts of a particular species
ACFOR scale
A simple scale used to describe the abundance of a species in a given area
Line transect
A way of collecting data more systematically; a tape is stretched between two points and every individual plant (or animal) that touches the tape is recorded
belt transect
When two tapes are stretched out and the ground between them surveyed or a tape stretched out and quadrats are taken at regular intervals
Spearman’s rank correlation coefficient
A statistical tool used to test whether two variables are significantly correlated
Student’s t-test
A statistical test that allows you to judge whether any difference between the means of the two sets of data is statistically significant
Chi squared test
A statistical test that enables you to determine whether there is a statistically significant association between the distribution of two species
Null hypothesis
The hypothesis that any differences between data sets are the result of chance
Significant
Not due to chance
Food chain
A simple way of modelling the feeding relationships between a series of organisms in an ecosystem
Trophic level
A term which describes the position of an organism in a food chain or web and its feeding relationship with other organisms
Producers
Organisms that make food by photosynthesis or chemosynthesis
Primary consumers
Organisms that eat producers, either plants or algae
Secondary consumers
Animals that feed on primary consumers
Tertiary consumers
Animals that feed on secondary consumers (i.e they eat other carnivores); they are usually the top predators in an area
Decomposers
The final trophic level in any set of feeding relationships; these are the microorganisms such as bacteria and fungi that break down the remains of animals and plants and return the mineral nutrients to the soil
Pyramid of numbers
A model of feeding relationships that represents the numbers of organisms at each trophic level in a food chain
Pyramid of biomass
A model of feeding relationships that represents the biomass of the organisms at each trophic level in a food chain
Pyramid of biomass
A model of feeding relationships that represents the biomass of the organisms at each trophic level in a food chain
Pyramid of energy
A model of feeding relationships that represents the total energy store of the organisms at each trophic level in a food chain
Secondary production
The process of making new animal biomass from plant material that has been eaten
Gross primary productivity (GPP)
In plants, the rate at which light from the Sun catalyses the production of new plant material, measured as gm -2 year-1, gCm -2 year-1or kJm-2 year -1
Net primary productivity (NPP)
The material produced by photosynthesis and stored as new plant body tissues; that is, NPP=GPP - R (where R = losses due to respiration)
Carbon cycle
A series of reactions by which carbon is constantly recycled between living things and the environment