definitions Flashcards

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1
Q

restriction enzymes function

A

is a protein isolated from bacteria that splices DNA sequences at sequence-specific sites, creating DNA fragments with a known sequence at the end

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2
Q

where do restriction enzymes come from

A

naturally occurring in bacterium/being able to restrict viruses

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3
Q

what is a palindrome

A

same forwards and backwards on both strands of DNA

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4
Q

why is a palindrome important to restriction enzymes

A

allows enzyme to know where to cut, can recognize sequence on both strands, and insures that both strands are cut

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5
Q

what are sticky ends

A

when another type of restriction enzyme cuts a DNA sequence to create two uneven ends that connect back to one another easily (puts fragments together easy)

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6
Q

what are blunt ends

A

when a certain restriction enzyme separates a DNA sequence to create two ends of DNA which are equal on both sides (keeps fragments together)

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7
Q

DNA ligase function

A

attaches and rejoins DNA bases with complementary bases

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8
Q

recombinant DNA (DNA has been recombined)

A

fabricated by combining different parts of an organism into one (DNA that has been cut and pasted)

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9
Q

gel electrophoresis

A

separates large DNA fragments from small DNA fragments

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10
Q

why do DNA fragments travel through the gel

A

DNA is negative, when the machine is turned on the positive magnets pull the fragments through the gel

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11
Q

speed of small fragments

A

travel through gel faster because there is less of it

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12
Q

speed of large fragments

A

travel through gel slower because there is more of it

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13
Q

why do we have size standards

A

to compare the lengths of the fragments (measured in base pairs)

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14
Q

transforming bacteria

A

putting plasmid into bacteria

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15
Q

ways of transforming bacteria

A

shock, poison, cook

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16
Q

steps of cloning a gene

A
  1. cut plasmid and gene of interest
  2. mix plasmid and gene of interest
  3. dna ligase seals them
  4. transform (shock, poison, cook)
  5. it replicates during cell division
17
Q

polymerase chain reaction

A

A PCR is a method that allows DNA copies to be made!!
It uses a thermal cycler (PCR Machine)

18
Q

why do we use PCR

A

allows us to create/duplicate DNA strands relatively easily compared to other methods.

19
Q

steps of PCR

A
  1. heat: denature-creates two strands
  2. build dna: annealing- primers add or “attach” a short piece of single stranded complementary DNA to both ends of the original DNA strand.
  3. taq polymerase adds free floating nucleotides to each strand,
20
Q

function of primers

A

they prepare or “prime” the site where taq polymerase can start working. This also ensures that either sides of the target region are copied on the Template DNA.

21
Q

function of taq polymerase

A

adds free floating nucleotides to each strand

22
Q

function of dna sequencing

A

tells us the sequence of the strands

23
Q

genetic engineering

A

cutting and pasting dna

24
Q

how can genetic engineering make GMO’s

A

-viral vectors
-gene gun

25
Q

viral vector

A

transfers gene to modify cell tissue virus delivers DNA straight to chromosomes

26
Q

gene gun

A

delivering genetic material into plants

27
Q

how can plasmids and viruses be used as vectors

A

plasmids: can be placed in prokaryotes
virus: can deliver recombinant dna in eukaryotes

28
Q

application for GMO

A

-bacteria that can make human insulin and covid vaccine (bacteria makes covid protein)
-eukaryotic gmo: enviro pig that poops clean
-recombinant plasmid into vector: dna can get into a host cell (cell makes holes bc of stress)
recombinant virus into vector: delivers dna

29
Q

gene therapy

A

treats/cures genetic disease

30
Q

reproductive cloning

A

creation of a genetically identical organism

31
Q

therapeutic cloning

A

source of embryonic stem cells

32
Q

somatic(body) cell nuclear transfer

A

nucleus from somatic cell is transferred to enucleated oocyte

33
Q

(copy gene of interest) gene of interest

A

you can make copies/get the protein

34
Q

(copy gene of interest) origin of replication

A

the plasmid is going to get copied

35
Q

(copy gene of interest) antibiotic resistance gene

A

bacteria who have the plasmid will live

36
Q

(make the protein) promoter sequence

A

transcription starts

37
Q

(make the sequence) terminator sequence

A

transcription stops

38
Q

multiple cloning sequence

A

allows DNA sequence to be inserted without messing up the plasmid

39
Q

T7 pro

A

regulates gene expression of recombinant proteins