Cycles Part 3 Flashcards
Nitrogen, Sulfur phosphorus cycles
What is the largest reservoir for nitrogen?
The largest reservoir of nitrogen is the atmosphere (3.8 × 1018 kg N). Atmospheric nitrogen is predominantly in the form of the diatomic molecule N2. Although N2 is commonly referred to as nitrogen or nitrogen gas, it should be more correctly referred to as dinitrogen, a term indicating its molecular composition.
How many atoms is a nitrogen made up of and how many bonds does it have?
The two nitrogen atoms in the N2 molecule are joined by a very strong triple bond.
If dinitrogen dominates the atmosphere, why might the availability of nitrogen often be a limiting factor in plant growth?
The strong triple bond is a major factor in the low reactivity of the N2 molecule. Plants require nitrogen in a form that can be used for the synthesis of proteins.
What are the two naturally occurring ways for nitrogen fixation?
Nitrogen fixation can be achieved in one of two naturally occurring ways:
via biological nitrogen fixation, where dinitrogen combines with hydrogen from water, and the ultimate product is the ammonium cation, NH4+
during lightning strikes, where dinitrogen combines with atmospheric oxygen, O2, and the ultimate product is the nitrate anion, NO3−.
What is nitrogen fixation?
For dinitrogen to be used by plants, it has to be converted into a usable form, or ‘fixed’. For this to occur, the triple bond has to be broken during nitrogen fixation reactions, which involve either hydrogen or oxygen.
The common term for biologically active nitrogen is fixed nitrogen.
What is biologically active nitrogen?
Chemical species such as NH4+ and NO3− can collectively be termed biologically active nitrogen because they can readily be incorporated by all plants, unlike dinitrogen, which can be considered to be biologically inactiv
What common farming practice suggests that the abundant pool of atmospheric dinitrogen cannot be used directly by most plants?
The use of nitrogen-containing fertilizers in the production of food crops and animal fodder.
What term describes the cycling of nitrogen, a significant amount of nitrate, NO3−, is converted back to dinitrogen (and minor amounts of two oxides of nitrogen: nitrous oxide, N2O, and nitric oxide, NO) by a bacterial process
denitrification
If denitrification occurred in isolation, how would it affect the levels of fixed nitrogen in an ecosystem?
Denitrification would cause levels of fixed nitrogen to fall.
If denitrification were the only major process operating in the biogeochemical nitrogen cycle, then the levels of fixed nitrogen would decline so rapidly that the biosphere would cease to function in less than 200 years. Common experience tells us that this is not the case, and the losses due to denitrification are balanced by a process that replenishes fixed nitrogen. suggest a mechanism for the replenishment of fixed nitrogen.
The biological fixation of atmospheric N2; this is partly what makes it such a vital process.
Nitrogen is essential to life, and is found in which of the following?
Fats
Carbohydrates
Proteins
Vitamins
Nitrogen is an important component of amino acids, which are the building blocks of protein as well as RNA and DNA. Nitrogen is also necessary for making chlorophyll. Proteins are necessary for the growth of any organism while RNA and DNA comprise the genetic material of cells. Without chlorophyll the majority of plant life would be unable to harness the Sun’s energy through photosynthesis.
What process do living organisms rely on to obtain nitrogen for building amino acids?
Assimilation
Fixation
Excretion
Digestion
Living organisms rely on nitrogen fixation, as the nitrogen in the atmosphere (N2) is not biologically active (i.e. in a form that organisms can use to build amino acids and proteins).
Which of the following organisms fixes nitrogen?
Trees
Fungi
Viruses
Bacteria
Nitrogen fixing bacteria, often found in root nodules but also free-living in the soil, fix nitrogen into a form that can be used by plant life. Note that these root nodules are different to mycorrhiza (which are fungi and are largely involved in phosphorous uptake).
Which chemical substance is produced through nitrogen fixation?
Oxygen (O2) Carbon dioxide (CO2) Ammonium ions (NH4+) Nitrate ions (NO3−)
Ammonium ions (NH4+) are produced by nitrogen fixation, when nitrogen gas is converted into these ions. The ions then bind with the soil particles – largely the clay and humus colloids. It should be noted that ammonium ions can be stored in the clay–humus complex for long periods of time. If the nitrogen fixers live in root nodules then this symbiotic relationship provides ammonium ions for the plant and carbohydrates for the bacterium.
What do the nitrifying bacteria convert?
Soil-bound ammonia to nitrite, and then nitrate
Dead plant materials to ammonia
Nitrogen to ammonia
Nitrates into nitrogen gas
Check answer
Your answer is correct. Nitrifying bacteria release soil-bound ammonia and convert it to nitrites (NO2−) and then nitrates (NO3−). Both forms of nitrogen are highly soluble. Note that nitrite seldom accumulates in the soil, as the conversion from NO2− to NO3− is generally much faster than the conversion from ammonium (NH4+) to NO2−.
What is the process that decomposers use to break down complex organic materials in simpler compounds, including ammonia?
Respiration
Excretion
Assimilation
Mineralisation/ammonification
Decomposers, particularly the fungi, break down complex organic materials through the process of mineralisation. The specific production of ammonia from complex organic materials is known as ammonification.
What is the name of the process that describes living organisms taking up nitrogen?
Digestion
Assimilation
Ingestion
Respiration
Your answer is correct. Assimilation is the process by which living organisms take up nitrogen so that it can be converted into amino acids and other important molecules.
What is the name of the process by which nitrogen is returned to the atmosphere, completing the cycle?
Nitrification
Ammonification
Denitrification
Respiration
Nitrate from the overlying aerated soil is washed into the waterlogged zone, and nitrate is a strong oxidising agent. Under these conditions, denitrifying bacteria, such as Pseudomonas, can continue to oxidise the organic matter using nitrate instead of oxygen. The end-products of this reaction are N2, and the two oxides N2O and NO, which can all be returned to the atmosphere.
This happens in aquatic systems too, where nitrate in the upper levels will diffuse to lower oxygen-free levels and will be used by denitrifying bacteria. The same process occurs, but on a vast scale in both lakes and the ocean.
What would happen if the nitrogen cycle in soil and lakes were closed?
Nitrogen fixation and denitrification will be occurring in both the lake and soil environments, and if each environment were a totally closed system, then nitrogen fixation would exactly balance the losses due to denitrification
How are large amounts of NO3- and NH3 be lost from soil processes?
Large amounts of NO3− and NH3 can be lost from soils by processes known as nitrate leaching and ammonia volatilisation respectively, and some of this fixed nitrogen could be washed into the lake
What term defines The loss of nitrogen as nitrate ions dissolved in water?
nitrate leaching
What term defines The loss of NH3 from terrestrial ecosystems to the atmosphere?
Ammonia volatilisation
What happens when levels of fixed nitrogen fall below optimum value in the soil?
these nitrogen-fixing organisms are capable of detecting when the levels of fixed nitrogen fall below the optimum value, and when this occurs, nitrogen-fixing genes (nif genes) are activated in the organisms. The activation of these genes initiates biochemical and physiological changes that convert the organisms into mini nitrogen-fixing factories, allowing them to thrive in an otherwise sterile environment.
hat are the consequences of the activity of nitrogen-fixing organisms?
The levels of fixed nitrogen in soils will be brought back up towards their optimum value. When this occurs, non-fixing organisms will recolonise the environment, because they are also opportunists, and simply benefit from the hard work of the fixers. However, the nitrogen-fixing organisms would be at a distinct ecological disadvantage once nitrogen levels in the soil began to rise. Remember that the triple bond of the dinitrogen molecule is very strong, and the breaking of this bond requires a lot of energy. Therefore, during nitrogen fixation, energy that could have been used for plant growth, for example, is diverted towards the breaking of the triple bond of dinitrogen
What happens when nitrogen fixing organisms stop using atmospheric nitrogen when optimum soil levels are low?
Non-fixing organisms simply assimilate fixed nitrogen, in which the N≡N bonds have already been broken for them, and hence more of their energy can be used directly for plant growth. In order to remain competitive when the levels of fixed nitrogen have been brought back to the optimum value, the nitrogen-fixing organisms will cease the fixation of atmospheric dinitrogen and simply assimilate fixed nitrogen, like all of the other organisms.
What is optimum value?
The Earth’s biosphere contains a constant level of fixed nitrogen that can be termed the ‘optimum value’.
What is considered as biologically active nitrogen that helps plants grow?
Biologically active nitrogen species, e.g. NH4+ and NO3−, can be used by plants for growth.
What are the 4 mechanisms of nitrogen fixation?
lightning strikes
natural biological nitrogen fixation
agricultural nitrogen fixation
industrical nitrogen fixation.
What percentage of total annual nitrogen fixation do lightening strikes account for?
it appears that lightning strikes account for about 10% of the total annual amount of natural nitrogen fixation.
Although the amount of nitrogen fixed by lightning strikes is insufficient for the needs of the biosphere, can you think of another ecological reason why the nitrogen fixed by this process may not be vital for modern ecosystems?
Thunderstorms are entirely random processes that will deposit fixed nitrogen on ecosystems irrespective of whether it will be used or not. For example, a thunderstorm could deposit fixed nitrogen on a lake that was already heavily polluted with nitrates, which would simply exacerbate an existing ecological problem.
What are the only known free living organisms that can naturally fix nitrogen?
The only confirmed free-living organisms that are capable of fixing nitrogen are certain bacteria, including free-living soil bacteria and cyanobacteria. Cyanobacteria are important nitrogen fixers in the oceans, although they are not found solely within the marine environment.
What the nitrogen fixing organisms that aren’t free living?
There are also nitrogen fixing organisms that aren’t free-living, but exist in association with other organisms. Perhaps the most famous of these are bacteria of the genus Rhizobium, which enter into a symbiotic relationship with legumes (peas, beans, clover, etc.). Such relationships exist where there is a close association between two distinct species where both organisms benefit from this situation.
Although these specialised organisms can fix atmospheric dinitrogen, their nitrogen-fixing capabilities may lie dormant if there is abundant fixed nitrogen in their immediate environment. For example, if a soil is rich in NH4+, then peas will thrive without requiring Rhizobium to fix atmospheric dinitrogen.
Can you think of any environment on land where you would find only nitrogen-fixing organisms?
Freshly exposed nitrogen-free rocks, such as lava flows or rocks that have recently been freed from glacial ice. The initial colonisation of such rocks can be achieved only by nitrogen-fixing organisms.
Why is ammonia so difficult to make?
It is because nitrogen is relatively unreactive (the molecules are held together by strong triple bonds). When trying to create ammonia using the catalyst (heated iron wool) the equation goes both ways – the reaction is reversible – ammonia can easily return to its constituent elements of hydrogen and nitrogen.
What is the most striking difference between industrial nitrogen fixation and biological nitrogen fixation?
Whereas bacteria can fix nitrogen at ambient temperatures and pressures using sunlight as the energy source, industrial nitrogen fixation is energy intensive, requiring both elevated temperatures and elevated pressures.
What percentage of nitrogen is lost when using it as fertilizer?
Furthermore, in the symbiotic relationships in legumes the biologically fixed nitrogen is incorporated directly into plant protein, whereas fertilizers are applied to the soils in the hope that the nitrogen will be assimilated by plants. However, fertilizers are actively cycled within the soil before they can be assimilated by plants. This results in the formation of soluble inorganic and gaseous forms of nitrogen that can be lost from the soils, and can lead to problems of pollution. Indeed, as much as 50% of fertilizer nitrogen can be lost from soils.
Name a present-day environment that contains ‘fossil’ organic matter that is not being recycled.
A peat bog is a good example. This is a highly reducing environment (i.e. one in which hydrogen is added or oxygen removed), and organic matter can remain largely intact.
What molecule is the most important for decomposition of organic nitrogen into an inorganic species.
However, despite this complexity, the end-point of the decomposition of organic nitrogen is simple inorganic species. Of these, NH4+ is the most important;
What term defines the breakdown of complex organic molecules, often involving the release of energy.?
Catabolism
What term defines Bonds between amino acids in a protein?
peptide bonds
What is the dominent species of nitrogen in living organisms?
NH4+ is the dominant species in living organisms
Can you think of a common experience that reveals the loss of soil nitrogen from animal wastes?
Walk close to a pig farm in summer and breathe deeply through your nose. Among those healthy smells, you will detect NH3.