Crash course system biology Flashcards
In a network how can you determine if the node has high or low degree and high or low betweeness
High degree if a node has many edges and high betweenness if the node has many shortest paths going through it
How does a gene network module identified using the Louvain method of community detection in igraph look?
The nodes in groups are in same color and different groups different colors and then overlayer of colors based on the groups.
Choose a biological network of your choice, define what a node is and what inceractions do exist and what types are the underlying interactions
Gene regulatory networks and edges between the nodes show the gne regulation as the gene can inhibit or prome each other
Draw the graph of the network based on the following adjencacy matrix:
A= 0111
1010
1101
1010
Draw this
A= 0111
1010
1101
1010
Is the network directed or undirected?
UNidrected