Community and hospital acquired bacterial infections Flashcards

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1
Q

List some common virulence factors.

A

Diverse secretion systems.

Flagella (movement, attachment).

Pili (important adherence factors).

Capsule (protect against phagocytosis), i.e. Streptococcus pneumoniae.

Endospores (metabolically dormant forms of bacteria)- heat, cold, dessication and chemical resistant, i.e. Bacillus sp. and Clostridium sp.

Biofilms (organised aggregates of bacteria embedded in polysaccharide matrix- antibiotic resistant), i.e. Pseudomonas aeruginosa, Staphylococcus epidermidis.

Exotoxins- neurotoxins, enterotoxins and pyrogenic exotoxins.

Endotoxins.

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2
Q

List the different types of exotoxins.

A
Neurotoxins.
Enterotoxins.
Pyrogenic exotoxins.
Tissue invasive exotoxins.
Miscellaneous exotoxins.
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3
Q

What are neurotoxins?

A

Act on nerves or motor endplates to cause paralysis, i.e. tetanus or botulinum toxins.

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4
Q

What are enterotoxins?

A

Act on the GI tract to cause diarrhoea- inhibit NaCl resorption, activate NaCl secretion or kill intestinal epithelial cells, resulting in osmotic pull of fluid into the intestine.

Infectious diarrhoea (bacteria colonise and bind to the GI tract, continuously releasing their enterotoxin locally, i.e. Vibrio cholera, Escherichia coli, Shigella dysenteriae, Campylobacter jejuni.

Food poisoning (bacteria grow in food and release enterotoxin into the food- enterotoxin is ingested resulting in diarrhoea and vomiting for less than 24 hours), i.e. Bacillus cereus, Staphylococcus aureus.

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5
Q

What are pyrogenic exotoxins?

A

Stimulate release of cytokines and can cause rash, fever and toxic shock syndrome, i.e. Staphylococcus aureus, Streptococcus pyogenes.

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6
Q

What are tissue-invasive exotoxins?

A

Allow bacteria to destroy and tunnel through tissue, enzymes that destroy DNA, collagen, fibrin, NAD, red or white blood cells, i.e. Staphylococcus aureus, Streptococcus pyogenes, Clostridium perfringens.

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7
Q

What are miscellaneous exotoxins?

A

Specific to a certain bacterium and/or function not well understood, i.e. Bacillus anthracis, Corynebacterium diphtheriae.

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8
Q

What are endotoxins?

A

Only produced by Gram negative bacteria.

Not a protein- the lipid A moiety of LPS.

Shed in steady amounts from living bacteria.

Treating a patient who has a Gram negative infection with antibiotics can sometimes worsen the condition- when bacteria lyse they release large quantities of LPS/endotoxin, leading to septic shock.

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9
Q

What is septic shock?

A

Sepsis that results in dangerous drops in blood pressure and organ dysfunction.

a.k.a. endotoxin shock- endotoxin often triggers the immune response that results in sepsis and shock.

Different effector molecules in Gram positive bacteria or even fungi can trigger this adverse immune response, so the term septic shock is inclusive.

Most effective treatment is to find the site of infection, the microbe responsible and eradicate it.

Lung, abdomen and urinary tract are common places.

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10
Q

What is an outbreak?

A

A greater-than-normal or greater-than-expected number of individuals infected or diagnosed with a particular infection in a given period of time, or a particular place, or both.

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11
Q

How can an outbreak be identified?

A

Surveillance provides an opportunity to identify outbreaks.

Good and timely reporting systems are instrumental to identify outbreaks.

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12
Q

What is haemolytic-uraemia syndrome characterised by?

A

A triad of acute renal failure, haemolytic anaemia and thrombocytopaenia.

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13
Q

What are the different types of communicable disease in Europe?

A

Respiratory tract infections.

Sexually transmitted infections, including HIV and blood-borne viruses.

Food- and waterborne disease and zoonoses.

Emerging and vector-borne diseases.

Vaccine-preventable diseases.

Antimicrobial resistance and healthcare-associated infections.

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14
Q

Give examples of respiratory tract infections.

A

Influenza.

Animal influenzas, including avian influenza.

SARS- severe acute respiratory syndrome.

Legionnaires’ disease (legionellosis)- Legionella pneumophila (Gram negative).

Tuberculosis- Mycobacterium tuberculosis (Gram positive).

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15
Q

What is Legionella pneumophila?

A

Gram negative bacterium.

Lives in amoeba in ponds, lakes, air conditioning units, whirlpools…

Infection route: inhalation of contaminated aerosols.

In humans, L. pneumophila will infect and grow in alveolar macrophages.

Human infection is ‘dead end’ for bacteria.

Important virulence factor: type IV secretion system.

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16
Q

What is the importance of type IV secretion system to Legionella pneumophila?

A

Allows L. pneumophila to infect and replicate in human macrophages.
Secretion of effector proteins by the type IV secretion system allow Legionella to replicate in a Legionella containing vacuole (LCV).

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17
Q

List sexually transmitted infections.

A

Chlamydia trachomatis infection- obligate intracellular bacterium, can only grow and divide within host cells, Gram negative.

Gonorrhoea (Neisseria gonorrhoeae)- Gram negative coccus.

Hepatitis B virus infection.

Hepatitis C virus infection.

HIV/AIDS.

Syphilis (Treponema pallidum)- Gram negative spirochete.

18
Q

What is Neisseria gonorrhoea?

A

Gram negative diplococcus.

Establishes infection in the urogenital tract by interacting with non-ciliated epithelial cells.

Important virulence factors and traits:

  • pili and antigenic variation
  • escape detection
  • clearance by the immune system
19
Q

List food- and waterborne diseases and zoonoses.

A

Anthrax (+ Bacillus anthracis- hoofed animals, i.e. sheep, cattle and goats, but humans who come into contact with infected animals can get sick)
Botulism (+ Clostridium botulinum- through wounds, canned/preserved food)
Brucellosis (- Brucella spp., caused by ingestion of unsterilised milk or meat)
Campylobacteriosis (Campylobacter sp., mostly C. jejuni)
Cholera (- Vibrio cholera)
Infection with Vero/shiga toxin-producing Escherichia coli (Gram negative)
Leptospirosis (- Leptospira spp.)
Listeriosis (+ Listeria monocytogenes)
Salmonellosis (- Salmonella sp.)
Shigellosis (- Shigella sp.)
Tularaemia (- Francisella tularensis)
Typhoid/paratyphoid fever (- Salmonella typhi and S. paratyphi)
Yersiniosis (- Yersinia enterocolitica)

20
Q

List non-bacterial food- and waterborne diseases and zoonoses.

A
Cryptosporidiosis (parasite)
Echinococcosis (parasite)
Giardiasis (Traveller's diarrhoea, protozoa)
Hepatitis A
Toxoplasmosis (parasite- congenital)
Trichinellosis (roundworm)
Varient Creutzfelt-Jakob disease (vCJD)
21
Q

What is Campylobacter sp. (mostly C. jejuni)?

A

Most commonly reported infectious GI disease in the EU.

Usually sporadic cases and not outbreaks.

Small children 0-4 years- highest risk group.

Infection most likely through undercooked poultry.

Virulence factor:

  • adhesion and invasion factors
  • flagella motility
  • type IV secretion system
  • toxin
22
Q

What is Salmonella sp.?

A

One of the most common GI infections in the EU.

Undercooked poultry.

Outbreaks.

Highest infection rate in small children (0-4 years).

Important virulence determinant:

  • type III secretion systems encoded on pathogenicity islands (SPI).
  • SPI1 is required for invasion
  • SPI2 is required for intracellular accumulation
23
Q

What is Vibrio cholerae?

A

Cholera is an acute, severe diarrhoeal disease.

Without prompt rehydration, death can occur within hours of the onset of symptoms.

Latest epidemic in Haiti, Oct 2010- ongoing.
As of Jan 2013, >600,000 cases with ca.10,000 death

Important virulence factor:

  • type IV fimbria
  • cholera toxin
  • carried on phages
24
Q

What is Listeria monocytogenes?

A

Risk group immunocompromised, elderly, pregnant and their foetus.

Listeria can enter non-phagocytic cells and cross three tight barriers: intestinal barrier, blood brain barrier, materno-foetal barrier.

Research on Listeria is instrumental for our current understanding of fundamental concepts in cell biology such as actin based cell mobility.

25
Q

List emerging and vector-borne diseases.

A
Malaria
Plague (Yersinia pestis, Gram negative)
Q fever (Coxiella burnetti, Gram negative)
Severe acute respiratory syndrome (SARS)
Smallpox (A virus, declared eradicated in 1980 due to successful vaccine programme)
Viral haemorrhagic fevers (VHF)
West Nile fever
Yellow fever
26
Q

List vaccine-preventable diseases.

A

Diphtheria (Clostridium diphtheriae, Gram positive)
Invasive Haemophilus influenzae disease (Gram negative)
Invasive meningococcal disease (Neisseria meningitidis, Gram negative)
Invasive pneumococcal disease (IPD, Streptococcus pneumoniae, Gram positive)
Measles
Mumps
Pertussis (Bordetella pertussis, Gram negative)
Polio, rabies, rubella
Tetanus (Clostridium tetani, Gram positive)

27
Q

Define antimicrobial.

A

Interferes with growth and reproduction of a ‘microbe’.

28
Q

Define antibacterial.

A

Commonly used to describe agents to reduce or eliminate harmful bacteria.

29
Q

What are healthcare-associated infections?

A

Infections that occur after exposure to healthcare.

Infections start > 48 hours after admission to the hospital.

3.2 million patients acquire a healthcare-associated infection in the EU each year (1 in 18 patients acquires a healthcare associated infection every day).

About 37,000 of them die as the direct consequence of the infection.

The most frequent types of HAI are surgical site infections, urinary tract infections, pneumonia, bloodstream infections and GI infections.

30
Q

What are the major problematic pathogens in hospital acquired infection?

A

‘ESCAPE’.

Enterococcus faecium (vancomycin resistant).

Staphylococcus aureus (methicillin resistant- MRSA).

Clostridium difficile (can establish infection because of previous antibiotic treatment).

Acinetobacter baumanii (highly drug resistant).

Pseudomonas aeruginosa (multidrug resistant, i.e. fluoroquinolone resistant).

Enterobacteriaceae:

  • pathogenic E. coli (multidrug resistant)
  • Klebsiella pneumoniae (multidrug resistant)
  • Enterobacter species (multidrug resistant)
31
Q

What are cephalosporins?

A

Class of beta-lactam antibiotic.

Target pathway: inhibit peptidoglycan synthesis.

Target protein: inhibit the activity of penicillin binding proteins (PBPs).

32
Q

How do pathogens become resistant to cephalosporins?

A

Extended spectrum beta-lactamase (ESBL) encoded on a plasmid.
Mobile.
ESBL enzyme cleaves cephalosporin.

33
Q

What are carbapenems?

A

Class of beta-lactam antibiotics.

Target pathway: inhibit peptidoglycan synthesis.

Target protein: inhibit the activity of penicillin binding proteins (PBPs).

34
Q

How do pathogens become resistant to carbapenems?

A

Carbapenemase enzyme, blakpc, encoded on a transposon mobile genetic element.
Enzyme cleaves carbapenem.

35
Q

What is Klebsiella pneumoniae?

A

Important cause of UTI and respiratory tract infections.

Risk group: immunocompromised.

High proportion of resistance to 3rd generation cephalosporins, fluoroquinolones and aminoglycosides.

Carbapenem-resistant Klebsiella pneumoniae (CRKP) is the species of CRE most commonly encountered in the US.

36
Q

What pathogen is the most important cause of antimicrobial resistant infection worldwide?

A

Methicillin resistant Staphylococcus aureus (MRSA).

37
Q

What is methicillin?

A

Beta lactam antibiotic.

Target pathway: inhibit peptidoglycan synthesis.

Target protein: inhibit the activity of penicillin binding proteins (PBPs).

38
Q

How do pathogens develop resistance to methicillin?

A

Expression of additional penicillin binding protein.
PBP2A has low affinity for methicillin and can still function in the presence of the antibiotic.
MRSA strains can synthesise peptidoglycan and survive in the presence of methicillin.

39
Q

What is vancomycin?

A

Not beta lactam.

Target pathway: inhibit peptidoglycan synthesis.

Target: binds to peptidoglycan precursor.

40
Q

How do pathogens develop resistance to vancomycin?

A

Multiple proteins.

Genes encoded on plasmid or transposon.

Results in the synthesis of a different PG precursor.

41
Q

Name three factors which contribute to the acquisition of hospital acquired infections.

A

Intervention (catheter, intubation, etc.)

Dissemination.

Concentration.