Chemistry Flashcards
Drugs
Substances which alter the biochemical processes within the body
Medicines
Drugs with beneficial effects
Give a brief history of drugs
The first drugs came from plant brews
Pharmacologically active products in plant extracts were identified
These compounds and derivatives of them were synthesised where possible
How do medicines function
Most medicines work by bonding to receptors
Receptors
Usually protein molecules that are on the surface of cells where they interact with small biological molecules
Pharmacophore
the structural fragment of the molecule which gives it pharmacological activity
By comparing the structure of molecules the… can be identified
Pharmacophore
What can be done once the pharmacophore has been identified?
Chemists can design and synthesise potential medicines with a greater likelihood of success
Why does electromagnetic radiation differ from other radiation
It can travel through a vacuum
Different types of radiation have different…
wavelengths
What are the highest energy radiations
X-rays and gamma rays
X rays and gamma rays are packed so tightly they are less than the width of an atom, therefore they can be considered to act as….
Particles
Speed of light =
Frequency x wave length
(C= v x n
Wave number
Used for the interpretation of spectra in the ingraved region of the spectrum
The reciprocal of wavelength
Wave number =
1/ wavelength = v=1\ theta
Atoms become….when they absorb energy and their electrons move to a…
Excited….
Higher energy level
Emission spectra
Results from exited elections moving back down to lower energy levels
The frequency lines produced in the emissions spectrum corresponds to the….
Difference in energy between two energy levels
Each line in the spectrum has a precise….that corresponds to a
Frequency
Value of energy (photon of energy
Hydrogen has only one atom meaning…
The emissions spectra has different series of lines in different parts of the electronegativity spectrum
Depends on which level the electron falls to
Hydrogen spectra contains one series of lines in the…
One in the…
And several in the…
U-V region
Visible
I-R region
Lines in the visible spectrum correspond to electrons falling back to n=2 and are known as
The Balmer series
How does a pharmacophore effect receptors
The shape of the pharmacophore compliments that of the receptor site, allowing it to fit into the receptor
The functional groups on pharmacophores and receptors are correctly positioned to interact and bind
Agonists
Enhance the body’s natural responses (produces a response like the body’s natural compounds)
Antagonists
Block the body’s natural responses (produces no response but prevents the body’s naturally active compounds
Visible light
Only a small part of the electromagnetic spectrum
A wider range would stretch from gamma rays to radio waves
When a beam of white light is passed through a prism (or diffraction grating) onto a white screen a …..is produced
Continuous spectrum i.e a rainbow
When atoms have been excited…
They emit light and other forms of energy
Name two ways atoms can be given extra energy
Heating a compound in a Bunsen burner or passing an electrical charge through vaporised atoms
If the light is viewed through a spectroscope….
The spectrum turns out to be a series of lines with different wavelengths
(And different colour colours in the Balmer series)
If a beam of white light radiation is passed through a gaseous sample of an element…
The radiation emerges has certain wavelengths missing. these show up as a dark line on a continuous spectrum
Absorption spectroscopy
Refers to spectroscopic techniques that measure the absorption of radiation as a function of frequency and wavelength due to its interaction with the sample
Spectra can be used to give information about….
How much of a species is present in a sample
Eg. Lead in drinking water or a foodstuff
When determining the level of lead in consumables, what are the steps taken
First a calibration graph is prepared from known concentrations of lead solutions
The radiation absorbed by this sample is plotted against the concentration and when an unknown sample is analysed the concentration of lead can be found on the graph
Name some properties of Electromagnetic radiation
has a wavelength and frequency and can travel through a vacuum at the speed of light
The higher the frequency…
The shorter the wavelength
Photons (Quanta)
‘Packets’ of Electromagnetic radiation
Energy of a photon related to frequency is given by:
E=hv
Planks constant
h=6.63x10^-34 Js^-1
Energy of 1 mole of photons related to frequency is given by:
E=Lhv
Avogadro’s constant (L)
6.02x10^23
C=
/lxv
Cis geometric isomers
Groups/ atoms are on the same side of the double bond
Trans geometric isomers
Groups/ atoms are on opposite sides of the double bond
Describe the changes of physical properties in geometric isomers
Geometric isomers display differences in some physical properties (melting point, boiling point)
It can also influence some chemical properties
Why do most geometric isomers contain a double bond
Single covalent bonds can easily rotate
Optical isomers
For some molecules the mirror image is a different molecule (the mirror image in non-superimposable)
Called Enantiomers
Distinguished by +/-, D/L, R/S
Chiral (optically active molecules)
When a molecule contains a Carbon atomic with four different groups attached
Racemic mixture
A 50/50 of two enantiomers
Optically inactive
As energy levels get further from the nucleus, they….
Get higher in energy as they get closer together
When an electron reaches the merged level it has effectively been….
Removed from the atom
Molecules that are optical isomers are called …
euantiomers
euantiomers have identical chemical and physical properties except for
Their effect on on plane polarised light
Their interaction with other chiral molecules
Normal light…
Vibrates in all directions
Plane polarised light
Vibrates in only one direction
What effect do optical isomers have on polarised light
They rotate the plane
Quantum mechanics consider electrons as…
Waves
Particles
Quantum numbers
Each electron and its energy can be defined by four quantum numbers
What are the 4 quantum numbers
Principle quantum number: n
Angular momentum quantum number: l
Magnetic quantum number: ml
Spin quantum number: ms
In the context of electron shells, the greater the value of n….
The greater the associated potential energy of the shell and the further it is from the nucleus
Subshells are defined by….
The angular momentum quantum number
In the context of subshells, the angular momentum quantum number..
Relates to the shape of the orbital and is given the values 0,1,2,3…ect (n-1)
Subshells are given the letters…
S,p,d, f
Electrons can be considered as acting as…
Particles and waves
Hersenbergs uncertainty principle
It is impossible to define with absolute certainty both the position and momentum of any electron at the same instance
Due to hersenbergs uncertainty principle all we can do when defining the position on an election is…
Define a region in space where the possibility of finding an electron is greater than 90%
Atomic orbital
The region in space where the probability of finding an electron is over 90%
The overall size of an orbital is governed by…
n, the principle atomic number
The actual shape of a orbital is given by…
The value L, the angular momentum quantum number
S-block
Groups 1-2
S orbitals
Spherical in shape
Diameter increasesas n increases
To find the multiplicity and spacial orientation of p,d and f orbital it is necessary to define..
The third quantum number: Ml the magnetic quantum number
Ml can have any integral value between…
-L and +L
P block elements
Groups 3 to 0
P orbitals
Have two lobes ♾
For p orbitals l=1 so there are three possible values of ML…..
-1,0,+1
Hence there will be three degenerated orbitals (ie, orbitals with equal energies)
As they have different Ml values they have different orientations in space
D- orbital
L=2
5 possible for ML (-2,-1,0,1,2)
For d- orbitals when n is greater than or equal to 3 there are…
5 degenerated orbitals
F-orbitals
L=3
7 possible values for ML(-3,-2,-1,0,+1,+2,+3)
To completely identify an individual electron a fourth quantum number is required called
Spin quantum number, Ms