Chemical Pathology Flashcards
How do you correct serum calcium level? When might this be necessary?
Corrected Ca2+ = serum Ca + 0.02*(40-albumin)
Important to do if the patient has low total Ca but has a possible source of hypoalbuminaemia, eg. liver failure
Describe the Ca homeostasis mechanisms when serum Ca decreases.
Drop in serum Ca causes PTH to be released from the parathyroid glands. PTH causes the release of Ca by bone, and stimulates the kidneys to increase the absorption of Ca + increase 1a hydroxylase activity + phosphate loss. 1a hydroxylase causes gut absorption of Ca.
These activities lead to an increase in serum Ca, and PTH decreases.
Describe the Vitamin D synthesis pathway
Vitamin D synthesis starts with 2 pathways-
1) Cholesterol converted to Cholecalciferol (D3) by sun
2) Absorbed from the gut as Vitamin D3 (animal) or D2 (plant- ergocalciferol)
Then, this is converted to 25 hydroxyVitamin D in the liver, then to 1,25 diOHVit D/ calcitriol by the kidneys.
A patient has a total calcium of 2.1 and an albumin of 25. What is the corrected calcium? Is this patient hypocalcaemic?
Corrected Ca= total Ca + 0.02(40-albumin)
= 2.1 + 0.02( 15) = 2.4 mmol/L
The patient is not hypocalcaemic. They have a low albumin.
Which is the active form of Vitamin D? Which the is measured form?
Calcitriol (1,25) is the active form, but 25OHD3 is the measured form
In which condition may Vitamin D synthesis increase? Why?
Sarcoidosis, due to an increase in the 1a hydroxylase enzyme in sarcoid tissue.
T/F. PTH works directly on the gut to increase Ca resorption.
False. PTH increase 1a hydroxylase activity, which increases gut Ca resorption.
What can be used as a marker of bone turnover? Where is it produced?
Alkaline phosphatase. Found in osteoblasts.
Which mineral is needed for PTH production?
Mg2+
What is the difference between osteoporosis and osteomalacia?
In osteoporosis, there is decreased amount of bone with normal structure.
In osteopenia, there is abnormally structured bone
Colle’s fracture would typically occur in which bone disease?
Osteoporosis
Name some risk factors for the development of osteoporosis.
Cushing’s syndrome, early menopause, thyrotoxicosis, anorexia, old age.
How is the severity of osteoporosis assessed? What is normal?
Measured using DEXA scanning, which assesses the density of bone at 2 sites, the lumbar spine and the ilium.
This gives a T score, which compares the density against the bone density of a young healthy person. A T score of -1 to -2.5 indicates osteopenia, and
Name some causes of Vitamin D deficiency.
Poor diet, malabsorption, lack of sunlight, liver disease, renal disease, anticonvulsants, phytic acid
What is the biochemical picture in Vitamin D deficiency?
Low Ca, low Vitamin D (25OH), low phosphate, high alk phos
In which patients might you find pseudofractures on Xray? What other name is there?
Patients with osteomalacia/Rickets. Also called Looser’s zones.
What are the treatments for osteoporosis?
Conservative: exercise, good diet w/ Vitamin D and Ca supplementation
Medical: bisphosphonates, teriparatide, strontium, HRT, and SERMs
What is the mechanism of action of bisphosphonates? What is an example?
Alendronate is an example of a bisphosphonate. They bind to bone and are taken up by osteoclasts, where they cause dysfunction and death, thereby preventing bone resorption.
What is the mechanism of teriparatide?
Teriparatide is a PTH derivative, and causes increased activity in osteoblats > osteoclasts, resulting in overall bone formation
What is an example of a SERM? What is the MoA?
Raloxifene. They work by selectively stimulating oestrogen receptors in bone but not in breast, and therefore cause bone formation
What are the signs + symptoms of hypercalcaemia?
Bones: bone and muscle pain
Stones: Polyuria, polydipsia, kidney stones
Moans: abdo pain, constipation
Groans: depression, psychosis, confusion, seizures
Name several causes of hypercalcaemia
Primary hyperparathyroidism, malignancy (bony mets, multiple myeloma, small cell lung cancer), sarcoidosis, familial hypocalciuric hypercalcaemia, thyrotoxicosis
What is the pathophysiology of familial hypocalciuric hypercalcaemia?
The Ca sensing receptor has a higher set point, meaning that PTH isn’t released until Ca is higher than expected. The affected individual is usually asymptomatic.
How do you manage hypercalcaemia?
Admit if levels very high/severe symptomatic.
IV fluids. Treat the cause eg. IV bisphosphonates, parathyroidectomy
What are the signs + symptoms of hypocalcaemia?
Convulsions Arrhythmias (prolonged QT) Tetany: Chvostek's sign (face)Trousseau's sign (carpo-pedal spasm) Stridor Perioral numbness
How do you manage hypocalcaemia?
Replace Ca and Vitamin D
Name some causes of hypocalcaemia.
High PTH: vitamin D deficiency, liver disease, renal disease (renal osteodystrophy), PTH resistance
Low PTH: hypoparathyroidism. Iatrogenic, DiGeorge syndrome, Mg deficiency eg. PPI use
What is serum vitamin D in renal osteodystrophy? Why?
Normal. The dysfunction is with the 1a hydroxylase enzyme, but 25OH Vit D is what is measured (this is unaffected)
What are the signs + symptoms of Paget’s disease of bone?
Bone pain, warmth over the affected bone, deformity, fractures, salt + pepper skull
What is the most useful investigation for diagnosing Paget’s disease?
Bone scan (radioactive)
What is the pathophysiology of pseudohyperparathyroidism?
There is peripheral resistance to PTH, rather than a true PTH deficiency.
What is pseudopseudohypoparathyroidism?
Inherited condition caused by a gene defect in the same gene as PHP and appears similar to Type 1 PHP but has NORMAL biochemistry. Not caused by resistance to PTH.
What are the 3 purines? What is their function?
Adenosine, guanine, inosine. They are second messengers, make up DNA/RNA and are involved in ATP transfer
Describe purine metabolism to uric acid
Purines -> hypoxanthine -> xanthine (by xanthine oxidase) -> urate (also by xanthine oxidase).
Urate is then excreted in urine.
Which enzyme involved in purine metabolism do humans lack?
Uricase
What are normal urate levels in males and females?
M: 0.12-0.42
F: 0.12-0.36
Where is gout most commonly found? Why?
The feet, specifically the 1st MTP joint. This is because the solubility of uric acid is 0.40 at 37˚ but only 0.27 at 30˚, so it is more likely to precipitate at the extremities.
Explain the excretion of uric acid
Freely filtered at the glomerulus, then reabsorbed + secreted. By the end 10% is left in urine, this is called the fractional excretion of uric acid (FEUA)
Describe the formation of nucleotides from purines
Two pathways:
1) de novo synthesis: completely formed from scratch
2) Salvage pathway from purines by the HPRT/HGPRT enzyme. Preferred method except in bone marrow
What is the key enzyme in the purine de novo synthesis pathway? What is important about it?
PAT. It is the enzyme that controls the rate-limiting step of the de novo synthesis pathway.
It is under negative feedback from GMP and AMP (the end products).
What is the key enzyme in the purine salvage pathway? What reaction does it catalyse?
HPRT/HGPRT. It converts hypoxanthine and guanine into IMP and GMP respectively.
Which enzyme is deficient in Lesch Nyhan syndrome? Explain the pathophysiology.
HPRT. This leads to a decrease in IMP/GMP, so there is reduced negative feedback on PAT and an increase in the de novo synthesis pathway, leading to high levels of uric acid.
Describe the presentation of Lesch Nyhan syndrome
Affected individuals are normal at birth, but have developmental delay by 6 months, and choreiform movements at 1 year. There is also spasticity, UMN pathology, mental retardation, self mutilation and hyperuricaemia and gout.
Name some causes of hyperuricaemia
Increased production: high cell turnover eg. chemotherapy for haem malignancies
Decreased excretion: CKD, thiazide diuretics, lead poisoning
What are the 2 forms of gout? Where are they found?
Acute (podagra) painful joint inflammation
Chronic (tophaceous) nodules deposited in soft tissue eg. ears, elbows
How do you manage gout acutely?
Decrease inflammation with NSAIDs, colchicine, steroids.
What is the MoA of colchicine?
Inhibits tubulin, which prevents neutrophil migration and decreases inflammation
How do you manage gout after initial acute management?
Increase fluids. Allopurinol, probenasid
What is the MoA of allopurinol and probenasid?
Allopurinol: xanthine oxidase inhibitor. Decreases uric acid production
Probenasid: uricosuric. Increases renal excretion of uric acid.
You should not give a patient allopurinol who is already taking ______. Explain.
Azathioprine. Allopurinol will increase levels of mercaptopurine, which is toxic to bone marrow.
How would you differentiate between gout and other types of painful joint swelling?
Joint effusion aspirate. View under polarised light with a red filter, and monosodium urate crystals will be negatively birefringent (blue perpendicular to axis). Pyrophosphate crystals (pseudogout) will be positively birefringent.
What is the Guthrie test and when is it done? Which conditions are tested for?
Newborn screening test for congenital diseases. Done at 5-8 days old.
CF, hypothyroidism, sickle cell disease, phenylketonuria, MCADD, homocystinuria, maple syrup urine disease (MSUD), isovaleric acidaemia, glutaric aciduria Type 1 (GA1).
Describe the pathophysiology of PKU. What is the treatment?
Normally, phenylalanine is converted to tyrosine by phenylalanine hydroxylase. This enzyme is deficient in PKU, causing phenylalanine to build up (and phenylpyruvate + phenylacetic acid). This is toxic and causes low IQ.
Treatment is low phenylalanine diet
Describe the pathophysiology of MCADD. What is measured on the Guthrie test?
There is deficiency in the median chain acyl-CoA enzyme, which is part of the fatty acid B oxidation pathway. This prevents the utilisation of fatty acids (ketogenesis) and causes hypoglycaemia during periods of fasting.
To test, measure acylcarnitine.
Describe the process of screening for CF.
Guthrie spot measuring immune reactive trypsinogen -> DNA mutation testing (for 4 mutations) if +ve
Describe the main defect in homocystinuria and the classic features.
No re-methylation of homocysteine. Causes lens dislocation, mental retardation, VTE
What is the point of the urea cycle? What happens when there are defects?
To metabolise ammonia to urea for excretion in the urine. Defects in the pathway (7 enzymes + 3 others) lead to respiratory alkalosis, vomiting, encephalopathy, psychiatric symptoms, coma.
What are investigations for urea cycle defects? Treatments?
-Ammonia levels (High)
-Glutamine (High, because ammonia attached to glutamate)
-Amino acids in the urea cycle (High or absent, depending where the defect one)
Treatment: decrease production (low protein diet), remove ammonia (Na benzoate, phenoacetate)
What is the biochemical hallmark of organic acidurias? Why do these occur?
High ammonia with metabolic acidosis and high anion gap.
Defect in the breakdown of complex amino acids eg. isovaleryl-CoA dehydrogenase
What syndrome can organic acidurias present like? this happen and what are the classic features?
Reye’s syndrome. Can be a feature of IMD or triggered by salicylates (aspirin), antiemetics, valproate.
Vomiting, lethargy, confusion, seizures
Name some features (biochemical + physical) of defects in the B oxidation pathway.
Hypoketotic hypoglycaemia.
Hepatomegaly and cardiomegaly
Name 2 main carbohydrate disorders and describe their mechanisms + presentations
Galactosaemia (Gal-1-PUT): galactose-1-phosphate builds up because of enzyme deficiency. D+V, conjugated hyperbilirubinaemia, hypoglycaemia, sepsis, hepatomegaly
Glycogen storage disorder type 1 (von Gierke): glycogen cannot be broken down because of phosphatase deficiency and builds up in the liver. Hepatomegaly, hypoglyacemia, lactic acidosis
What is a key feature of mitochondrial diseases that explains why they can present at any age in any organ?
Heteroplasmy
Which organs are typically affected in mitochondrial diseases and why?
Brain, kidneys, muscle, retina, endocrine organs. They have a high energy requirement.
What is MELAS?
Mitochondrial encephalopathy, lactic acidosis and stroke-like episodes
What are some investigations used to diagnose mitochondrial disorders?
Lactate (high), CSF lactate and pyruvate, CK (high), muscle biopsy, mitochondrial DNA
For which IMDs what you measure urine mucooligopolysaccharides?
Lysosomal storage diseases eg. Tay Sachs
At what age is renal function in children fully developed?
2 years. Before this time, GFR is low
Name 3 differences between adult and child renal function
Infants have
- Lower GFR:surface area
- Persistent sodium loss
- Less reabsorption and concentrating ability
- More susceptible to acidosis
Name some causes of neonatal hyperbilirubinaemia
Within the first 24 hours:
Haemolytic disease of the newborn
G6PD deficiency
Crigler-Najjar syndrome
Prolonged jaundice: Congenital infection/sepsis Congenital hypothyroidism Breast milk jaundice Hepatobiliary disease IMDs
What level of conjugated bilirubin is always pathological in neonates? Name 2-3 causes.
> 20umol/L
Biliary atresia, IMDs eg. galactosaemia
What are the biochemical features of osteopenia of prematurity?
Normal Ca
Low Phosphate (<1 mmol/L)
Very high alkaline phosphatase (>1200U/L)
What are the fat soluble vitamins and what results when these are deficient?
A: colour blindness
D: osteomalacia/Ricket’s.
E: anaemia, neuropathy
K: defective clotting
What are the different B vitamins and what results when these are deficient?
B1 (thiamin): Beri Beri, Wet- heart failure and Dry- Wernicke’s encephalopathy (confusion, ataxia, ophthalmoplegia)
B2 (riboflavin): glossitis
B3 (niacin): pellagra (dermatitis, dementia, diarrhoea)
B6 (pyridoxone): dermatitis, anaemia
B12 (cobalamin): pernicious anaemia
How do you measure B1 and B2 levels?
RBC transketolase for B1, RBC glutathione reductase for B2
Trace elements:
Deficiency of ____ can cause anaemia and excess can cause haemochromatosis.
Deficiency or excess of ____ can cause thyroid problems.
Excess of ____ can cause Wilson’s disease.
Iron
Iodine
Copper
What are some conditions that can result in malnutrition?
GI conditions: coeliac, Crohn’s
Chronic liver disease and kidney disease
Pancreatic insufficiency
What is Marasmus? What is Kwashiorkor?
Marasmus: generalised poor nutrition. Thin and emaciated.
Kwashiorkor: protein deficient. Muscle wasting, oedematous, fatty liver
What is normal serum sodium? What are the 2 main physiological systems controlling sodium + fluid balance and how do they work?
135-145 mmol/L
- ADH/vasopressin: released by posterior pituitary in response to increasing osmolality/decreasing BP –> acts on renal collecting duct V2R to increase AQP2 insertion in the luminal membrane –> water resorption –> decrease plasma osmolality
- Aldosterone: released by the adrenal glomerulosa in response to renin secretion by the kidneys –> binds to MR in renal collecting duct –> Na resorption (and water) –> increase BP
a) How do you calculate serum osmolarity?
b) What is the serum osmolarity:
- Na 140, Cl 100, bicarb 18, urea 5, glucose 5.5, K 4
a) Serum osmolarity = 2 (Na + K) +glucose + urea
b) 298.5
a) What is the serum osmolality in true hyponatraemia? b) What are the 3 main types of hyponatraemia? Name several causes of each.
a) Low serum osmolality
b)
1. Hypovolaemic: D+V, diuretics, Na-losing nephropathy
2. Euvolaemic: SIADH, Addison’s, hypothyroidism
3. Hypervolaemic: heart/renal/liver failure
How can urine sodium be useful in determining the cause of hyponatraemia?
Urine sodium can indicate if the kidneys are functioning properly to absorb sodium. eg:
- If the patient is hypovolaemic, high urine sodium indicates a renal cause eg. diuretics vs low urine sodium indicates lack of overall body sodium eg. D+V
- If the patient is hypervolaemic, high urine sodium indicates a renal cause eg. AKI/CKD vs low urine sodium indicates low overall sodium eg. liver/heart failure
- Urine sodium is high if euvolaemic
Why do liver failure and heart failure cause hyponatraemia?
Liver failure: decreased breakdown of vasodilative compounds eg. NO –> decreased BP –> increased ADH to compensate –> increase water volume without increasing sodium –> hypervolaemic hyponatraemia
Heart failure: low CO –> low BP –> ADH release –> water resorption > sodium resorption –> hypervolaemic hyponatraemia
Also have aldosterone secretion leading to increased BP (and some sodium resorption but not enough).
How do you treat hyponatraemia?
Management depends on the cause.
Hypovolaemic: give fluids and treat the cause eg. antiemetics
Euvolaemic: endocrine Ix (TFTs, urine osmolality, ACTH, etc). Treat cause eg. levothyroxine, glucocorticoids + fludrocortisone
Hypervolaemic: treat cause. Fluid restriction +/- diuresis
How should you fluid replace a patient with hyponatraemia? What is the significant complication to avoid?
Slowly! Aim for increase in sodium of 8-10 mmol over 24 hours.
Must avoid central pontine myelinolysis
How would you diagnose SIADH?
Plasma sodium + osmolality (LOW Na, LOW osm)
Urine sodium + osmolality (HIGH Na, HIGH osm >100)
Rule out other endocrine causes eg. hypothyroidism, adrenal failure
What are the signs/symptoms of hyponatraemia?
Nausea and vomiting –> confusion –> seizures –> coma
A patient has a serum sodium of 130 mmol/L and a plasma osmolality of 290 mOsmol/L. What is the diagnosis and what might be the cause?
The patient has pseudo-hyponatraemia. This may be caused by conditions that increase plasma lipids/proteins eg. hypertriglyceridaemia or MM
What are some causes of SIADH?
- Intracranial pathology eg. infection, tumours
- Lung pathology eg. cancer, TB, infection
- Drugs eg. SSRI, TCA, opiates, PPIs, carbamazepine
- Surgery
What is the management of SIADH?
- Fluid restriction
- Demeclocycline (reduces ADH responsiveness in the tubules). Must monitor U&Es
- Vaptans eg. tolvaptan (V2R antagonist)
Name some causes of hypernatraemia
Caused by unreplaced water loss eg. D&V in elderly, renal losses (osmotic diuresis), diabetes insipidus
How would you investigate hypernatraemia?
- Glucose (test for DM- causes osmotic diuresis)
- U&Es (caused by low K+), Ca (high)
- Plasma and urine osmolality (test for DI)
- Water deprivation test (test for DI)