Chemical Pathology Flashcards
Which cycle forms ammonia?
Urea cycle
Name three urea cycle defects:
- Lysinuric protein intolerance
- Hyperornithinaemia-Hyperammonaemia-Homocitrullinuria (HHH)
- Citrullinemia type III.
What is the inheritance pattern of Ornithine Transcarboxylase Deficiency?
X-linked
What serum marker is a marker of hyperammoniaemia?
Serum glutamine
What urine marker is a marker of hyperammoniaemia?
Urine orotic acid
What is the first line management for hyperammoniaemia?
Sodium benzoate
Which acid-base disorder is associated with raised ammonia?
Respiratory alkalosis
Why is hyperammoniaemia associated with respiratory alkalosis?
Induces hyperventilation of the central respiratory drive
What are the features of a urea cycle disorder?
- Vomiting without diarrhoea
- Respiratory alkalosis – Hyperammonaemia induces hyperventilation of the central respiratory drive.
- Neurological encephalopathy
- Avoidance or change in diet.
- Hyperammonaemia - >200 uM.
Name a common organic aciduria
Isovaleric Acidaemia
What type of smell is associated with Isovaleric Acidaemia (urine)
Cheesy or sweaty smell
How is leucine exported from the cell?
Isovaleryl carnitine
What is the neonatal presentation of an organic aciduria?
- Unusual odour
- Truncal hypotonia
- Hypocalcaemia
- Pancytopenia
- Lethargy
- Limb hypertonia
- Neutropenia
- Feeding problems
- Myoclonic jerks
What is the trigger of Reye’s syndrome?
salicylates (aspirin)
What is the presentation of Reye’s syndrome?
- Vomiting, lethargy
- Increasing confusion, seizures
- Decerebration
- Respiratory arrest
When is the Guthrie spot test performed?
At 5-6 days ofa ge
What five conditions are screened in the Guthrie spot test?
Phenylketonuria
Congenital hypothyroidism
Cystic fibrosis
Sickle cell anaemia
MCAD deficiency
Which enzyme is deficiency in phenylketonuria?
Phenylalanine hydroxylase
How is phenylketonuria screened
Phenylalanine levels
How is congenital hypothyroidism screened?
TSH levels
What is the commonest mutation associated with cystic fibrosis?
F508del CFTR
Which test is used to screen for cystic fibrosis at 5 days of age?
Immune reactive trypsin
What screening test is performed for diagnosing MCAD?
Acylcarnitine
PAH converts phenylalanine into what?
Tyrosine
Phenylketonuria results in an accumulation of what?
phenylalanine
What are the clinical features associated with phenylketonuria?
Low IQ <50
Delayed developmental milestones, microcephaly, hypopigmentation, hyperactivity, seizures and musty odour to skin and urine
What is the chronic management for phenylketonuria?
Low Phe and adequate tyrosine intake
What is the consequence of mitochondrial fatty-acid beta oxidation?
Hypoketotic hypoglycaemia
+ hepatomegaly and cardiomegaly
What are the three types of ketones?
Acetone, acetoacetate, 3-hydroxybutryate.
Galactosaemia is characterised by a deficiency of which enzyme?
galactose-1-phosphate uridyl transferase (GALT)
Galactosaemia is characterised by what raised serum marker?
Raised Gal-1 phosphate and galactose
Gal-1-phosphate is a substrate for which ocular molecule?
Aldolase
High concentrations of Gal-1-phosphate can result in what ocular complications?
Bilateral cataracts
What is the investigation of choice for diagnosing galactosaemia?
- Urinary galactose
Management of galactosaemia?
Avoid galactose sources e.g., milk
Type 1 glycogen-storage disease is associated with which enzyme deficiency?
Glucose-6-phosphatase
What is the clinical presentation of glycogen storage disease?
- Hypoglycaemia
- Hepatomegaly
- Lactic acidosis
- Exercise intolerance
- Protruding abdomen
- Faltering growth, growth failure, short stature, and thin legs
- Weakness
- Neutropenia – Recurrent bacterial infection in GSD1b (Impaired neutrophil homeostasis).
GSD1 causes what type of hypoglycaemia?
Hypoketotic due to inhibition of fatty acid oxidation by malonic acid
What is the the management of GSD type 1?
Nocturnal intragastric glucose feedings during the first 2 years of life, and appropriate carbohydrate intake to maintain satisfactory blood glucose.
What is Von Gierke Disease
Glycogen storage disease type 1
What is the underlying pathogenesis of GSD-type 1?
Absence of phosphatase – G6P and G1P cannot be exported (phosphate cannot across cell membrane).
* Glucose-6-phosphate transport and hydrolysis requires a catalytic hydrolase – GSD is marked by G6Pase deficiency.
* Leads to progressive glycogen accumulation in the liver, and fasting hypoglycaemia due to impaired export.
What is the inheritance pattern for GSD-TYPE 1?
Autosomal recessive
What is the inheritance pattern of MCAD?
Autosomal recessive disorder affecting mitochondria fatty acid beta-oxidation
MCAD converts medium-chain fatty acyl-CoA into what two products?
short-chain fatty acyl-CoA and acetylCoA
What pathway does medium-chain acyl-CoA dehydrogenase play in during the fasting state?
Ketogenesis
What type of hypoglycaemia is caused by MCAD?
Hypoketotic hypoglycaemia.
When are symptoms of MCAD deficiency evident?
neonatal period between 3 and 15 months after a period of fasting or acute illness
How is MCAD deficiency detected on newborn blood screening?
Elevated acylcarnitine
Which genetic test confirms the diagnosis of MCAD deficiency?
Homozygous 985A
What is the management for MCAD deficiency?
Reducing times of fasting and ensuring nutrition intake to meet metabolic demands + high carbohydrate diet.
Zellweger spectrum disorder is associated with an absence or reduction of what?
Functional peroxisomes
Which gene is implicated in Zellweger Spectrum Disorder?
PEX gene
What is the neonatal presentation of Zellweger Spectrum Disorder ?
- Hypotonia (floppy baby)
- Reduced spontaneous movements and weak cry.
- Feeding difficulty
- Seizure
- Craniofacial abnormalities – facial dysmorphisms, large fontanelles, wide sutures, hypoplastic supraorbital ridges.
- Retinopathy – early blindness.
- Sensorineural deafness
Which type of disorders cause nipple inversion and retardation?
Glycosylation disorders
Tay-Sachs disease is caused by a deficiency of what enzyme?
hexosaminidase-A
Which ethnicity is associated with Tay-Sacs disease?
Ashkenazi Jewish Heritage
What is the inheritance pattern for Tay-Sachs disease?
Autosomal recessive
What characteristic retinal finding is seen in Tay-Sachs disease?
Cherry red spot
What is the clinical presentation of Tay-Sachs disease?
A degenerative disease of grey matter in infancy – symptoms arise between 3-6 months (very slow progressing).
* Mild motor weakness
* Irritability
* Hypersensitivity to auditory and sensory stimuli
* Exaggerated startle response (auditory myoclonus)
* Neuroregression.
* Hepatosplenomegaly
* Cardiomyopathy
What is the investigation performed for Tay-sachs disease?
Urine mucolipopolysaccharides and WBC enzyme levels.
What is the management for Tay-Sachs disease?
Enzyme replacement therapy; substrate reduction therapy, and bone marrow transplantation.
What is the 60-40-20 rule regarding the distribution of water?
60% - total body weight
40% - intracellular
20% extracellular
Concentrations of sodium and chloride are raised in which compartment?
Extracellular
What term denotes the total number of particles in solution?
Osmolality
What is the units for osmolality?
mmol/Kg
What are the unites for osmolarity?
mmol/L
What are the physiological determinants of osmolality?
Na+ + K+ + HCO3- + Urea + Glucose.
What is the calculation for osmolarity?
2 (Na+ + K+) + urea and glucose.
What is the normal range for osmolality?
275 – 295 mmol/kg.
if the osmolarity < osmolality, what should be assumed?
There are additional unmeasured solutes that are dissolved in the serum
What is the normal range of sodium?
135-145 mmol/L
What is the threshold for severe hyponatraemia?
<125 mmol/L
What are the clinical presentations of symptomatic hyponatraemia?
o Nausea and vomiting (<134 mmol/L)
o Confusion (<131 mmol/L)
o Seizures, non-cardiogenic pulmonary oedema (<125 mmol/L)
o Coma (<117 mmol/L) and eventual death.
What are the causes of high osmolality?
Glucose/mannitol infusion
What term describes hyponatraemia caused by irrigation absorbed through damaged prostate?
TURP syndrome
What is the osmolality associated with pseudohyponatraemia?
Normal/high
What are the three classifications of true hyponatraemia?
Hypervolaemia
Euvolaemic
Hypovolaemic
What are the renal hypovolaemic causes of hyponatraemia?
Diuretics, Addison’s, salt-losing nephropathies
How can hyponatraemia be distinguished?
By hydration status and urinary Na+
What determines renal versus non-renal causes of hyponatraemia?
Urinary sodium >20 = renal cause
what are the non-renal causes of hypovolaemic hyponatraemia?
Vomiting, diarrhoea, excess sweating, third space losses (ascites, burns)
What are the evuolaemic causes of hyponatraemia?
SIADH
Severe hypothyroidism
Glucocorticoid deficiency
What are the hypervolaemic causes of true hyponatraemia?
AKI,CKD, cardiac failure, cirrhosis, inappropriate iv fluid
Which CAH is associated with salt-loss?
21-hydroxylase deficiency
21-hydroxylase deficiency is associated with a reduction in which two hormones?
Cortisol and aldosterone
21-hydroxylase deficiency causes an accumulation of what?
17-OH-progesterone
What are the clinical features associated with true hyponatraemia?
o Hyponatremia/hyperkalaemia with volume depletion (lack of aldosterone) Salt-losing crisis.
o Hypoglycaemia (lack of cortisol)
o Ambiguous genital in female neonates
o Growth acceleration
Why is cirrhosis associated with hyponatraemai?
Liver failure causes an impaired breakdown of vasodilators (nitric oxide) - low BP causes a rise in ADH - water retention - dilutional effect on sodium
Which marker is raised in heart failure and exacerbates hyponatraemia?
ADH
What is the management for hypovolaemic hyponatraemia?
Manage cause - e.g., anti-emetics
Replace depleted fluid with regular sodium monitoring
How is Addison’s managed?
Hydrocortisone +/- Fludrocortisone.
What is the first-line drug for status epilepticus secondary to hyponatraemia?
Hypertonic saline
What is the consequence associated with rapid correction of sodium?
Central pontine myelinolysis
What is the presentation of central pontine myelinolysis?
pseudobulbar palsy, paraparesis, locked-in syndrom
What is the diagnostic criteria for SIADH?
- True hyponatraemia (<135) + low plasma/serum osmolality (<270) +high urine sodium (>20) + high urine osmolality (>100) + no adrenal/thyroid/renal dysfunction.
- Clinically euvolemic.
Which test confirms SIADH?
- Normal 9am cortisol and normal TFTs (I.E diagnosis of exclusion).
Which malignancy is associated with SIADH?
Small cell lung cancer (most common); prostate, pancreas, lymphoma (ectopic secretion)
Which drugs can cause SIADH?
Opiates, SSRIs, TCAs, carbamazepine, PPIs.
what is the management for siadh?
Fluid restriction and manage the cause
Which drug can be used to increase ADH resistance for the management of SIADH?
- Demeclocycline and tolvaptan
What is the the range threshold for hypernatraemia?
> 148 mmol/L
What is the presentation of hypernatraemia?
- Sensation of thirst is driven by hypernatremia – self-correction of sodium.
- Thirst Confusion Seizures + ataxia Coma
What are hypovolaemic causes of hypernatraemai?
- Loop diuretics
- Osmotic diuresis (uncontrolled DM, glucose, mannitol), following initial hyponatraemia.
- Diabetes insipidus
- Renal disease (impaired concentrating ability).
Which endocrine disorder is associated with hypernatraemia?
Conns’s syndrome
Which electrolyte imbalance is associated with Diabetes insipidus?
Hypernatraemia
What is the management for cranial diabetes insipidus?
Desmopressin
Cranial diabetes insipidus is caused by what?
Surgery, trauma, tumours (craniopharyngioma), autoimmune hypophysitis (from CTLA-4 ipilimumab).
What is the diagnostic investigation for diabetes insipidus?
8-hour water deprivation test
What type of diabetes insipidus is characterised by insensitivity to ADH?
Nephrogenic diabetes insipidus (vasopressin receptor resistance0
Following administration of desmopressin, what result is observed on a water deprivation test for cranial diabetes insipidus?
Urine osmolality increases to >600 mOsmol/kg
What is the normal range for potassium?
3.5-5.5 mmol/L
What is the predominant intracellular ion?
Potassium
What is the threshold concentration for hypokalaemia?
<3.5 mmol/L
What are the renal loss causes of hypokalaemia?
- Hyperaldosterism (Patient with high BP and low K+); iatrogenic excess of cortisol (increased potassium secretion).
- Increased sodium delivery to the distal nephron (thiazide and loop diuretics).
- Osmotic diuresis
What i the management of nephrogenic diabetes insipidus?
Thiazide diuretics
Which drugs can cause nephrogenic diabetes insipidus?
Lithium, demeclocyline
Which drug can cause hypokalaemia?
Beta-agonists
Insulin
Thiazide and loop diuretics
What are the rare renal causes of hypokalaemia?
Renal tubular acidosis type 1 and 2
Which acid-base abnormality CAUSEs hypokalaemia?
Metabolic alkalosis
Which renal tubular acidosis is characterised by hypokalaemia and acidosis?
Type 1 and type 2
Which renal tubular acidosis is characterised by hyperkalaemia and acidosis?
Type 4
What is type 4 renal tubular acidosis?
Aldosterone deficiency or resistance (acidosis and hyperkalaemia).
What is the management for mild hypokalaemia (3 - 3.5 mmol/L)?
Oral KCl (2 SandoK tablets TDS for 48h)
What is the management for severe hypokalaemia (<3 mmol/L)?
IV potassium chloride due to risk of cardiac arrest
Which investigation is performed for Conn’s syndrome?
Aldosterone : renin ratio - raised
What is the important investigation performed in hyperkalaemia?
ECG
Which renal tubular acidosis is associated with hyperkalaemia?
Type 4
What is the cause of type 4 renal tubular acidosis?
Aldosterone deficiency
Which drugs are associated with decreased excretion of potassium?
Potassium-sparing diuretics (Spironolactone), NSAIDs, ACEi, ARBs.
What are the ECGA changes associated with hyperkalaemia?
Loss of P waves
Tall-tented T waves
Widened QRS complexes (Broad-complex ventricular tachycardia)
sine wave pattern
What are the indications for calcium gluconate administration in hyperkalaemia?
> 5.5 with ECG changes or potassium >6.5
What is the first line drug management for hyperkalaemia?
10 mL 10% calcium gluconate
What is the second-line management for hyperkalaemia following calcium gluconate?
- 100 mL 20% dextrose and 10 units of short-acting insulin (Actrapid – insulin will drive potassium into the cells and dextrose prevents hypoglycaemia).
Which drug is a potassium binding?
Calcium resonium
What is the compensatory response with metabolic acidosis?
Hyperventilation
What is the anion gap equation?
(Na + K) – (Cl + HCO3)
What is the normal anion gap?
14-18 mmol/L
What are the causes of a raised anion gap?
- Glycols – ethylene glycol + propylene glycol
- Oxyproline – Chronic paracetamol use
- L – Lactate (sepsis)
- D – Lactate (Short bowel syndrome)
- M – Methanol overdose
- A – Aspirin
- R – Renal failure
- K – Ketoacidosis
What is the calculation for osmolar gap?
Osmolality (measured) - osmolarity (calculated)
What are the markers of synthetic function?
- Clotting (INR)
- Albumin
- Glucose
What is the best marker for acute liver injury?
Prothrombin time
What is raised in acute viral hepatitis?
Transaminitis
What is the ratio of ALT:AST in EtOH liver disease?
AST:ALT >2
What is the ratio of AST:ALT in viral hepatitis?
1:1
Which liver marker differentiates liver-associated rise in ALP from bone?
GGT
What are the two raised markers associated with cholestatic/obstructive picture of liver disease?
GGT and ALP
What are the physiological cause of isolated raised ALP?
Pregnancy (third trimester)
Childhood (growth spurt)
What are the pathological causes of raised ALP >5 ULN?
Paget’s disease
Osteomalacia
Liver (cholestasis, cirrhosis)