Chem/Phys II Flashcards
What is homotropic regulation?
When a molecule serves as a substrate for its target enzyme, as well as a regulatory molecule of the enzyme’s activity (O2 = homotropic allosteric modulator of hemoglobin)
Fluid pressure changes with depth are assumed to be linear. Which statement best explains why this does not hold true for atmospheric pressure changes?
The volume of a mass of air is not constant
With decreasing temperature:
Air is able to hold less H2O
The complete conversion of three moles of glucose by aerobic fermentation yields how many moles of acetic acid?
6
Which of the following phase changes are exothermic processes?
Liquid to solid and gas to solid
What is spectrophotometric absorbance?
Used to measure the concentration of metal ion remaining in aqueous solution following extraction (materials absorb light of a certain wavelength)
How does adding electron-withdrawing functional groups increase acidity?
They provide inductive stabilization of the conjugate base by pulling electron density away from the negatively-charged position
What is the Henderson-Hasselbalch equation?
pH = pKa + log [B] / [A]
When a patient is on the operating table for heart surgery, surgeons need to clamp major nearby blood vessels before cutting them because, according to Bernoulli’s equation, a volume of pressurized blood opened to the atmosphere:
Will convert its pressure to kinetic energy, rapidly exiting the body and causing shock
What is the principal quantum number?
The first quantum number (n), denotes the energy level of the electron, higher principal quantum numbers = greater energy, farther from the nucleus (relates to row of the periodic table)
What is the azimunthal quantum number?
Letter (l), denotes the subshell in which the electron is found, values range from 0 to n-1 (0 = s subshell, 1 = p subshell, 2 = d subshell, 3 = f subshell)
What is the magnetic quantum number?
Letter (ml), denotes the spatial orientation of the electron, values = -l to l
What is the spin quantum number?
Letter (ms), denotes the spin orientation of the electron, which relates to its angular momentum (m = +/- 1/2)
The high-energy radiation produced by the gamma rays has sufficient energy to:
Generate free radicals, excite electrons to higher energy levels, and eject electrons from molecular orbitals
Free radicals from ionizing radiation are highly unstable and have carcinogenic effects. These effects most likely result from damage to:
Nucleic acids
When electrons move from the excited to ground state:
There is a loss of vibrational energy
If a scientist chooses not to employ a SEC column, but wishes to fractionate a protein sample on the basis of only molecular weight, what technique would be most appropriate?
SDS-PAGE
What is another name for tert-butyl chloride?
2-chloro-2-methylpropane
Atrial fibrillation is the most common heart arrhythmia, causing palpitations, fainting and chest pain. According to the information in the passage, what is most likely to be observed in the ECG during atrial fibrillation?
Missing P waves and an irregular rate
What regions of an ECG are most likely to be explained by the movement of sodium ions into a cardiac neuron?
P, Q, and R
What is the formula for phosphorous acid?
H3PO3
Efforts to treat lactic acid buildup in muscles were attempted using dissected muscle specimens in the laboratory. One of these experiments involved ammonium formation from dissolved ammonia. Under conditions of excessive lactic acid:
The final concentration of ammonium will be higher than otherwise due to lower pH (ammonia will convert to its conjugate acid, ammonium)
How is Solubility Enhancement Ratio calculated?
By dividing the solubility of A in a certain media by its solubility in water
What of the following boundaries would give the lowest-quality image to a physician?
Muscle/bone
The piezoelectric effect, when generating ultrasound waves, involves the conversion of:
Electrical energy to mechanical energy (the piezoelectric effect begins with voltage generating a current through the crystal (electrical energy) and culminates in the crystal vibrating (mechanical energy))
Conversion of pyruvate into glucose requires enzymes present in:
Both the mitochondria and the cytosol
What is the chemical formula for alkanes, alkenes, and alkynes?
CnH2n+2, CnH2n, and CnH2n-2
What is the Arrhenius equation?
k = Ae^-Ea/RT
What is the net charge on a valine molecule in the human body?
0
What is an example of an amphiprotic molecule?
Sodium bicarbonate, NaHCO3
What are the units of the Boltzmann constant?
J/K
What is true about solvents for TLC?
Anhydrous methanol has a greater eluting strength (adheres to the stationary phase) than pentane when used as solvents in a TLC procedure
An ideal buffer should have:
A pKa within 1 pH unit of the expected experimental conditions
What is normality?
The number of moles of protons per liter of solution
What is associated with higher antioxidant actiivity/thermodynamic favorability?
Lower enthalpy values
What is vitamin B1?
Thiamine, a coenzyme in metabolic processes including amino acids and carbohydrates (deficiency = Korsakoff’s syndrome -> memory derangement/language problems)
What is vitamin D?
A lipid-soluble molecule primarily involved in calcium metabolism
What is vitamin K?
A group of closely-related molecules that contribute to blood coagulation and clotting
In comparison to the cohesive forces between water molecules of the protein solution droplet, how can the strength of interaction between water and oil molecules at an oil-water interface be characterized?
Weaker, because they are forces created by induced polarity in nonpolar molecules
What is a spherical lens?
It can be converging or diverging, and it may not cause the light rays to converge any sooner
Light inside the thin glass tube of a laproscopic surgical device strikes the edge of the glass tube and is entirely reflected back into the tube, with none of the light exiting to the surrounding medium. Which of the following must be true?
Incident angle is greater than or equal to the critical angle
Which of the following acids is expected to generate the strongest hydrogen bonding?
HF
A researcher carries out a column chromatography at physiological pH, using a stationary medium with a net positive charge. If a solution containing the following oligopeptides is poured into the column, which oligopeptide will most likely be found in the first fraction collected?
Positively charged will elute first (won’t stick to stationary phase, elute the fastest with the mobile phase)
If a given channel in a nerve membrane shows a preference for transporting larger solutes, which of the following would increase the likelihood of a given particle being transported by the channel?
Adding an electron to a Cl atom to create a Cl- ion
Oligodendrocytes:
Serve to increase nerve conduction velocity in the central nervous system
What is the purpose of the long tail on Coenzyme Q10?
To allow CoQ10 to stay in and move in the hydrophobic portion of the inner mitochondrial membrane
Oxidation of aldehydes produces which functional group?
Carboxylic acids
What would result if CoQ accepted only one electron instead of two?
There would be a free radical
Which of the following characteristic changes in the IR spectrum would indicate the conversion of a fatty acid to an ester?
Disappearance of a broad peak in the 2500-3300 cm^-1 region only (loss of an OH group)
What is amperes equal to?
Coulombs per second
What equations can I use together?
V = IR and I = Q/delta T
Why are synthesized trans fats used as substitutes for saturated fats?
The hydrocarbon tails of trans fats stack more densely than those of comparable cis fats, making them less likely to be liquids at room temperature
Hematoporphyrin usually forms a complex with:
Fe2+
When NADH is oxidized, what happens to the hybridization of the nitrogen on the nicotinamide ring, and the C4 carbon atom opposite the nitrogen?
Both and nitrogen and the C4 carbon are converted from sp3 to sp2 hybridization
Even though enols are good nucleophiles, what are even better nucleophiles?
Their conjugate base, enolates
What is the process of a Claisen condensation?
An ester enolate reacting with another part of an ester
Surfactant-substrate interactions can involve which of the following intermolecular forces?
London dispersion forces, hydrogen bonding, and ion-dipole interactions
Anion surfactants most likely reduce the rate of nucleophilic reactions of hydroxide ion with neutral compounds by:
Forming a negatively-charged surfactant-substrate complex that repels the nucleophile
When does beta positive decay occur?
When the proton-to-neutron ratio is too high
The surface temperature of the sun (5770 K) is much greater than that of the earth (298 K). As a result, solar photons have a much higher energy than Earth photons. Given that information, how does the frequency and velocity of an Earth photon differ from that of a solar photon?
The frequency of the Earth photon would be lower; the speed of the photons would be identical
What is a chaotropic agent?
Any molecule in aqueous solution that can disrupt the hydrogen bonding network including the bonds between water molecules
What does a high SASA (solvent-accessible surface area)?
It indicates the residue is located at the surface of the protein, and therefore is less likely to be critical for overall protein structure
Which of the following gases would decrease the pH when dissolved in an aqueous solution?
Carbon dioxide
Individuals with a large bone cross-section:
Are more likely to experience a fraction
Refractive myopia is corrected by the use of a diverging lens of appropriate optical power. When compared to a healthy eye, a myopic, but otherwise normal, eye’s near point is most likely:
Smaller than that of a healthy eye
What is an example of a stereoselective reagant?
Diethyl tartrate (stereospecific = SN2)
An object floats in water with 4/5 of its volume submerged. If the object is then placed in a type of oil with a density half that of water, which of the following is true about the object placed in the oil?
The object will sink to the bottom
p-p-nitrophenol has a pKa of 7.16, whereas ethanol has a pKa of 16. What best explains this difference?
Anion stability achieved by delocalized pi electrons across the phenolic salt
What is a molecule?
A group or cluster of two of more atoms held together by chemical bonds
What is a compound?
Two or more different types of elements combined chemically in a fixed proportion
What makes something a good nucleophile?
Electron density, negative charge, the conjugate base is always a better nucleophile, less electronegative
In polar aprotic solvents:
nucleophilicity increases going up the periodic table
In polar protic solvents:
nucleophilicity increases going down the periodic table
What is the difference between spring force and spring work?
F = -kx, W = kx/2
Remember!
AN OX and RED CAT
If a question is asking about how much charge is transferred:
It is probably good to write out a balanced equation
Remember:
Current and electrons always flow in opposite directions
At pH = 7.3, what is the bond order of the shortest bond to oxygen in glycine?
1.5 (at physiological pH, the carboxyl group is deprotonated, the negative charge is delocalized by resonance between the two oxygen atoms)
More energy is needed to evaporate water to vapor than to melt ice to water because:
No hydrogen bonds exist in water vapor
When looking at solubility:
Look at polarity
The rate-limiting step has:
The highest Ea
Short-chain saturated fatty acids present in some animal products can produce a rancid odor if they are released from a triglyceride. Which of the following methods would prevent this type of rancidity?
Dehydration and sterilization (saturated = no double bonds, hydrogenation won’t do anything)
Equation relating sound speed to wavelength and frequency
C = lambda * f