Chem Path Flashcards

1
Q

What is chemical pathology

A

WHAT IS CHEMICAL PATHOLOGY?
• Chemical Pathology is the branch of pathology dealing with the biochemical basis of disease and the use of biochemical tests for diagnosis and management.
• It is also known as Clinical Biochemistry or Clinical Chemistry

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2
Q

Why are lab tests usually requested

The justification for discretionary testing is well summarised by answering some questions, state five of these questions

A

THE USE OF CLINICAL BIOCHEMISTRY TESTS
• Laboratory tests are most often requested for defined diagnostic purposes.
• The justification for discretionary testing is well summarised by answering the following question:

Why do I request this test?
2 What will I look for in the result?
3 IfI find what I am looking for, will it affect my diag-nosis?
4 How will this investigation affect my management of the patient?
5 Will this investigation ultimately benefit the

patient?

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3
Q

How often should a patient be investigated

A

HOW OFTEN SHOULD A PATIENT BE INVESTIGATED? This depends on the following:
1.How quickly numerically significant changes are likely to occur:
• for example, concentrations of the main plasma protein fractions are unlikely to change significantly in less than a week

2.Whether a change, even if numerically significant, will alter treatment:
• for example, plasma transaminase activities may alter within 24 h in the course of acute hepatitis, but, once the diagnosis has been made, this is unlikely to affect treatment.
• By contrast, plasma potassium concentrations may alter rapidly in patients given large doses of diuretics and these alterations may indicate the need to change treatment

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4
Q

State four purposes of lab tests

A

1.SCREENING
lab tests are used for mass screening (e.g., phenylketonuria and sickle cell in newborns). Usually done for plenty people .like a mass something. Usually done for people who are asymptomatic. Low dose ct scan is usually used as a screening test.
•screening asymptomatic patients (they don’t have symptoms. You’re just checking routinely.e.g., mammography, Here are some examples of screening in asymptomatic patients:

  1. Colonoscopy: Recommended for adults over a certain age (typically 50 years and older) to screen for colorectal cancer, even if they have no symptoms.
  2. Mammography: Used to screen for breast cancer in women, usually starting from age 40 to 50, depending on guidelines, before any symptoms such as lumps or pain develop.
  3. Prostate-Specific Antigen (PSA) Test: Used to screen for prostate cancer in men, typically over the age of 50, who do not have symptoms like difficulty urinating or blood in the urine.
  4. Pap Smear: A screening test for cervical cancer in women, usually starting at age 21, even if they have no symptoms.
  5. Blood Pressure Measurement: Regular screening for hypertension in adults, as high blood pressure often has no symptoms but increases the risk of heart disease and stroke.
  6. Lipid Profile: Blood tests to screen for high cholesterol levels, which can lead to cardiovascular disease, even if the patient is asymptomatic.
  7. Bone Density Scan (DEXA): Used to screen for osteoporosis in postmenopausal women and older adults, particularly those with risk factors, before any symptoms like fractures occur.
  8. HIV Testing: Recommended for all adults at least once and regularly for those at higher risk, even if they have no symptoms, to prevent the spread of the virus and manage the condition early.
  9. Diabetes Screening (HbA1c or Fasting Blood Glucose): Used to screen for type 2 diabetes in adults, particularly those with risk factors like obesity or a family history, even if they are asymptomatic.
  10. Lung Cancer Screening: Low-dose CT scans are recommended for long-term smokers or former smokers, typically over the age of 55, even if they do not have any respiratory symptoms.

These screenings aim to detect diseases early in asymptomatic individuals, improving the chances of successful treatment and reducing the risk of complications.), and
Screening Symptomatic patients (they have the symptoms and you want to check if they have the disease . stress ECG in patients with chest pain). Here are some additional examples of screening symptomatic patients:

  1. Blood Glucose Testing: For patients presenting with symptoms like excessive thirst, frequent urination, or unexplained weight loss, blood glucose tests are used to screen for diabetes.
  2. Electrocardiogram (ECG): In patients with symptoms like chest pain, palpitations, or shortness of breath, an ECG is used to screen for cardiac arrhythmias, ischemia, or myocardial infarction.
  3. D-Dimer Test: For patients with symptoms such as sudden shortness of breath or chest pain, a D-dimer test can be used to screen for pulmonary embolism or deep vein thrombosis.
  4. Thyroid Function Tests: In patients with symptoms such as fatigue, weight gain, or cold intolerance, thyroid function tests (e.g., TSH, T3, T4) are used to screen for thyroid disorders like hypothyroidism or hyperthyroidism.
  5. Chest X-ray: For patients with a cough, fever, or difficulty breathing, a chest X-ray is commonly used to screen for pneumonia, lung cancer, or other pulmonary conditions.
  6. Complete Blood Count (CBC): In patients with symptoms like fatigue, pallor, or frequent infections, a CBC is used to screen for anemia, infections, or hematologic disorders.
  7. Urinalysis: For patients presenting with symptoms

2.DIAGNOSIS
• They are used to confirm a diagnosis (e.g., coronary angiogram to confirm coronary artery disease in a patient with a positive stress electrocardiogram).

How to know if a test is for diagnosis or for screening symptomatic people:
Analyze the Clinical Context:

•	If the patient is symptomatic and the test is ordered to identify the underlying cause of their symptoms, it is most likely a diagnostic test.
•	If the test is conducted despite the patient having symptoms, and it’s part of a routine evaluation or a risk assessment tool, it could be a screening test for an associated condition or to determine the extent of a known disease.

3.MONITORING TREATMENT
• They are used to monitor a patient’s disease status le.g., plasma glucose in a person with uncontrolled diabetes). So the person has a disease or has had the disease before and is coming to just check how far. This doesn’t apply to those with a family history of the disease but have never gotten it before.

  1. PROGNOSIS
    • providing information on disease susceptibility. It is used to predict the risk or the disease course or the likelihood of disease progression

Certainly! Here are some MCQs focused on identifying when a test is used for prognosis:

A 62-year-old woman with stage II breast cancer undergoes a genetic test to determine her risk of cancer recurrence. This test is used to guide treatment decisions and predict long-term outcomes. What is the primary purpose of this test?

A) Screening
B) Diagnostic
C) Monitoring
D) Prognostic

Answer: D) Prognostic

Explanation: The genetic test is used to predict the risk of cancer recurrence and guide treatment decisions, which is characteristic of prognostic testing.

A 45-year-old man with diagnosed prostate cancer undergoes a PSA (Prostate-Specific Antigen) test every six months to assess the likelihood of disease progression and adjust treatment accordingly. What is the primary purpose of the PSA test in this context?

A) Screening
B) Diagnostic
C) Monitoring
D) Prognostic

Answer: C) Monitoring

Explanation: The PSA test is used to monitor the progression of prostate cancer in a patient with a known diagnosis, not to predict the disease course. It’s monitoring cuz you’re assessing disease progression to make changes to treatment plan but you don’t do this in prognosis. Prognosis, you’re checking risk to see what you can do long term not now

A 50-year-old woman with rheumatoid arthritis undergoes an anti-CCP (anti-cyclic citrullinated peptide) antibody test to evaluate the likelihood of severe disease progression and joint damage. What is the primary purpose of this test?

A) Screening
B) Diagnostic
C) Monitoring
D) Prognostic

Answer: D) Prognostic

Explanation: The anti-CCP antibody test is used to predict the severity and progression of rheumatoid arthritis, making it a prognostic test.

A patient diagnosed with heart failure has an echocardiogram to assess the current heart function and determine the appropriate treatment plan. What is the primary purpose of this echocardiogram?

A) Screening
B) Diagnostic
C) Monitoring
D) Prognostic

Answer: C) Monitoring

Explanation: The echocardiogram is used to monitor the function of the heart and guide ongoing treatment, rather than to predict future disease outcomes.

A 30-year-old woman with a newly diagnosed melanoma undergoes a staging scan to evaluate the extent of the disease and predict the likely outcome and response to therapy. What is the primary purpose of this staging scan?

A) Screening
B) Diagnostic
C) Monitoring
D) Prognostic

Answer: D) Prognostic

Explanation: The staging scan is used to assess the extent of melanoma and predict the disease’s progression and response to treatment, which is prognostic.
It’s prognostic cuz this person is newly diagnosed so your now trying to see how bad the disease is and predict the future outcome for the patient. If the person wasnt newly diagnosed, it would’ve been monitoring.

This example highlights when to choose “prognostic” as the correct answer:

  • The staging scan for the newly diagnosed melanoma is being used not just to diagnose the extent of the disease but to predict how the disease might progress and how the patient might respond to therapy. This aligns with the purpose of a prognostic test, which is to provide information on the likely future course and outcome of the disease based on current findings.

In this context:
- Prognostic is the right choice because the scan is used to assess the extent of the disease and predict the patient’s future outcome.

This contrasts with monitoring, which would involve ongoing tests after the initial diagnosis to see how the disease evolves or responds to treatment over time.
Hhh

Let’s clarify the differences between prognostic and monitoring:

  • Purpose: To predict the future course or outcome of a disease.
  • When Used: Typically at or near the time of diagnosis.
  • Example: A staging scan in a newly diagnosed cancer patient to determine how advanced the disease is and predict how the patient might fare in the future. This helps doctors understand the likely outcome (prognosis) and plan treatment.
  • Purpose: To track the disease’s status and response to treatment over time.
  • When Used: After a diagnosis has been made, during and after treatment.
  • Example: Regular PSA tests in a prostate cancer patient who is already diagnosed, used to check if the disease is progressing or responding to treatment.
  • Staging Scan for Melanoma: The scan is being done to evaluate the extent of the disease at the time of diagnosis and to help predict how the disease might progress and how well the patient might respond to treatment. This is why it’s considered prognostic—it’s helping to predict the future outcome.
  • If this patient, after being diagnosed, were undergoing regular scans to check if the melanoma was getting worse or if the treatment was working, that would be monitoring.

Understanding when a test is predicting future outcomes (prognostic) versus tracking ongoing changes (monitoring) is key. Prognostic tests give an initial outlook, while monitoring tests keep track over time.

e.g. prognosis can be predicted by noting the degree of test abnormality

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5
Q

State five criteria for laboratory screening

A

LABORATORY SCREENING CRITERIA
1. There must be a high prevalence of the disease to justify the expense.
2. Significant morbidity and mortality must be associated with the disease if it is left untreated.
3. The disease must be detectable before symptoms surface in the patient.
4. An effective therapy must be available that is safe and inexpensive.
5. The test must be cost effective and easily performed in the laboratory.

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6
Q

Sequence of tests depends on several factors
State 3

In critical situations where immediate action is necessary, what type of test do you do first ?(a.the one with the highest yield,b. the one with the lowest yield,c. the one with the lowest risk,d. the one with the highest risk)

In non critical situations, when time allows and the patients condition allows for it, what kind of tests do you do first?(a. High risk and high yield. b. Less risk or lower yield c. High risk and low yield d. High yield and low risk )

A

Here’s a summary of the considerations and principles involved:

Sequence of Tests:

1.	Dependence on Factors:
•	The choice of which test to conduct first depends on various factors such as the urgency of the situation, the risk involved, and the expected yield of the test (likelihood of providing useful information).
2.	Critical Situations:
•	In critical situations where immediate action is necessary, the test with the highest yield (likelihood of providing a clear diagnosis or treatment direction) may be chosen, even if it carries some risks.
3.	Non-Critical Situations:
•	When time allows and the patient’s condition allows for it, less risky or lower yield tests may be conducted first to gather preliminary information.
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7
Q

In what order should perform tests for patients?

A

Order of Testing:

1.	From Cheap to Costly:
•	Starting with less expensive tests can be economical and practical, especially when resources are limited.
2.	From Less to More Risky:
•	Conducting less invasive or risky tests before more invasive ones minimizes potential harm to the patient.
3.	From Simple to Complex:
•	Beginning with simpler tests helps establish a baseline understanding before proceeding to more complex diagnostic procedures.

The above order is Not always practical.
One or more objectives may be sacrificed for speed, convenience, accuracy, a waiting list for procedures, time needed to await the results, and the condition of the patient.
Sometimes it may be best to get the costly test done first; it may solve the problem quickly and save money in the long run.
Practical Considerations:

•	Speed and Convenience: Sometimes, tests are prioritized based on how quickly results are needed or how convenient they are to perform.
•	Accuracy: The reliability and accuracy of each test are crucial considerations in determining their order.
•	Cost-effectiveness: Occasionally, conducting a more costly test upfront may be justified if it can quickly resolve the diagnostic uncertainty and potentially save costs in the long run.
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8
Q

State two sources of variations in test results

A

SOURCES OF VARIATION IN TEST RESULTS
1 Analytical factors These cause errors in measure-ment.
2 Biological and pathological factors Both these sets of factors affect the concentrations of analytes in blood, urine and other fluids sent for analysis.

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9
Q

State four indicators of test reliability
Which of the indicators reflect how well the test method performs day to day in a laboratory?(they are two )

Which of the indicators deal with how well the test is able to distinguish disease from absence of disease?(they are two)

A

What are the indicators of test reliability?
• Accuracy, Precision, Specificity and Sensitivity
• Accuracy and precision reflect how well the test method performs day to day in a laboratory.
• Sensitivity and specificity deal with how well the test is able to distinguish disease from absence of disease.
• These are effectively analytical sources of variation.

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10
Q

What is precision of a test
What is accuracy of a test
There’s a picture explaining this further in the chem path slides

MCQ 1

A new assay for measuring glucose levels in blood is tested by running the same sample 10 times. The results are consistently between 100-105 mg/dL, but the reference method shows the true glucose level is 90 mg/dL. How would you describe the performance of this assay?

A) Precise but not accurate
B) Accurate but not precise
C) Both precise and accurate
D) Neither precise nor accurate

A laboratory uses two different assays to measure serum cholesterol. Assay A shows results consistently around 200 mg/dL for a sample, while Assay B shows results around 190 mg/dL for the same sample. The reference method indicates the true value is 195 mg/dL. Which statement is true?

A) Both assays are precise and accurate
B) Assay A is precise but not accurate; Assay B is accurate but not precise
C) Both assays are precise but not accurate
D) Both assays are accurate but not precise

A laboratory reports that a new enzyme assay for measuring liver function yields results that are highly variable with different runs but consistently average at the expected true value. How would you describe this assay?

A) Precise and accurate
B) Precise but not accurate
C) Accurate but not precise
D) Neither precise nor accurate

A new biochemical assay for measuring serum creatinine is evaluated. The assay shows the following results for a single sample across multiple runs: 85, 86, 87, 85, and 86 µmol/L. However, the reference method indicates the true creatinine level is 80 µmol/L. What is the most accurate description of the assay’s performance?

A) Precise but not accurate
B) Accurate but not precise
C) Both precise and accurate
D) Neither precise nor accurate

In a comparative study, a laboratory finds that a new test for measuring serum albumin has results within 1% of the reference method’s values for all tested samples, but the variability between test results is quite high (coefficient of variation is 10%). What does this suggest about the new test?

A) Precise and accurate
B) Precise but not accurate
C) Accurate but not precise
D) Neither precise nor accurate

A

PRECISION AND ACCURACY IN BIOCHEMICAL TESTS
• Precision:The amount of variation in results after measuring the same sample repeatedly. So four test results can be wrong in the same area but will be said to be precise just not accurate. They are precise because they are in the same area.
• A test method is said to be precise when repeated analyses on the same sample give similar results.
• Accuracy:How close the result Is to the “true” value as determined by a reference method. Four test results are all correct but are in different areas.

1.A
2.C
3.C
4.A
5.C

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11
Q

Although a test that is 100% accurate and 100% precise is ideal, in practice, test methodology, instrumentation, and laboratory operations all contribute to small but measurable variations in results.
True or false

A

True

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12
Q

BIOLOGICAL CAUSES OF VARIATION
• As well as analytical variation, test results also show biological variation in both health and disease.
• Key questions are:
• How do results vary in health?
• How do results vary in disease?
Explain how results vary in disease
Explain how results vary in health

A

How do results vary in health?
• The concentrations of all analytes in blood vary with time due to diverse physiological factors WITHIN the individual.
• There are also differences BETWEEN individuals.

The variability in analyte concentrations in blood is influenced by several factors, which can be categorized into within-individual and between-individual differences:

Within individuals:
Physiological Factors:
- Diurnal Variation: Many analytes fluctuate throughout the day. For example, cortisol levels are typically higher in the morning and lower in the evening.
- Food Intake: Levels of glucose, lipids, and other nutrients can change based on recent food consumption.
- Physical Activity: Exercise can affect analyte levels such as lactate and electrolytes.
- Hydration Status: Dehydration or overhydration can impact concentrations of substances like sodium and potassium.
- Stress: Acute stress can alter levels of hormones like adrenaline and cortisol.
- Medications: Timing and type of medication can influence analyte levels, such as blood glucose levels in diabetic patients taking insulin.

Between individuals:
Genetic Factors:
- Genetic Variants: Different individuals may have genetic variations affecting enzyme activity, receptor function, or metabolic pathways, leading to variations in analyte levels.

Environmental and Lifestyle Factors:
- Diet: Dietary habits, such as intake of vitamins, minerals, and other nutrients, can influence analyte levels.
- Lifestyle: Factors such as smoking, alcohol consumption, and overall physical fitness impact various biomarkers.
- Health Status: Chronic conditions like diabetes, hypertension, or liver disease can alter baseline analyte levels.

Demographic Factors:
- Age: Certain analytes change with age. For instance, hormone levels or renal function markers may vary across different age groups.
- Sex: Hormonal differences between genders can affect analyte levels, such as testosterone and estrogen levels.

Understanding these variations is crucial for accurate interpretation of test results. Factors such as timing of the sample collection, patient preparation, and individual health status should be considered to account for variability and ensure reliable results.

B How do results vary in disease?
• Biochemical test results do not exist in isolation.
• For example, in a patient with severe abdominal pain, tenderness and rigidity, there may be several differential diagnoses to consider - including, for example,
• acute pancreatitis
• perforated peptic ulcer and
• acute cholecystitis.

In the context of disease, biochemical test results can vary due to the presence of multiple underlying conditions, and their interpretation must consider the broader clinical picture. Here’s how results can vary based on different diseases and why it’s important to consider differential diagnoses:

Acute Pancreatitis:
- Biochemical Markers: Elevated serum amylase and lipase are commonly associated with acute pancreatitis. However, levels can also be influenced by the severity and timing of the onset.
- Other Considerations: The severity of the disease can affect the degree of enzyme elevation, and overlapping conditions like chronic alcoholism or gallstones may further complicate the results.

Perforated Peptic Ulcer:
- Biochemical Markers: Perforation of a peptic ulcer often leads to elevated white blood cell counts (leukocytosis) due to inflammation and possible sepsis. Serum electrolytes may also be affected if there is significant gastrointestinal fluid loss.
- Other Considerations: The presence of free air in the abdominal cavity and subsequent infection can influence various biomarkers, and test results must be interpreted in the context of imaging findings and clinical symptoms.

Acute Cholecystitis:
- Biochemical Markers: Elevated serum bilirubin, alkaline phosphatase, and transaminases (AST, ALT) can be indicative of acute cholecystitis. Inflammation of the gallbladder often affects these liver enzymes.
- Other Considerations: If there is obstruction of the bile duct, additional tests like ultrasound or HIDA scan may be necessary to confirm the diagnosis and differentiate it from other conditions such as pancreatitis or liver disease.

  • Complex Clinical Picture: When a patient presents with symptoms like severe abdominal pain, biochemical tests alone are not sufficient. The clinical presentation and other diagnostic tools (e.g., imaging studies, endoscopy) play a crucial role in differentiating between conditions.
  • Test Results Integration: Test results must be integrated with clinical symptoms and history. For example, elevated lipase in the context of abdominal pain might suggest pancreatitis, but similar results could occur with other conditions affecting the abdominal organs.

A patient presents with severe abdominal pain and elevated serum amylase and lipase. The differential diagnosis includes acute pancreatitis and perforated peptic ulcer. What additional information would be most crucial in distinguishing between these two conditions?

A) Patient’s age
B) Serum cholesterol levels
C) Presence of free air on imaging
D) Serum bilirubin levels

Answer: C) Presence of free air on imaging

Explanation: The presence of free air on imaging is indicative of perforated peptic ulcer, which can help differentiate it from acute pancreatitis, which would not typically present with free air.

A patient with suspected acute cholecystitis has elevated serum bilirubin and alkaline phosphatase levels. Which other test result is likely to be elevated if the patient has acute cholecystitis?

A) Serum amylase
B) Serum lipase
C) Serum AST
D) Serum sodium

Answer: C) Serum AST

Explanation: Elevated serum AST (aspartate aminotransferase) is commonly associated with liver and gallbladder issues, including acute cholecystitis, alongside elevated bilirubin and alkaline phosphatase.

In a case of severe abdominal pain with elevated white blood cell count (WBC) and normal serum amylase and lipase, which condition is most likely if the patient also exhibits signs of gastrointestinal fluid loss?

A) Acute pancreatitis
B) Acute cholecystitis
C) Perforated peptic ulcer
D) Hepatitis

Answer: C) Perforated peptic ulcer

Explanation: Perforated peptic ulcer often presents with elevated WBC count due to inflammation and potential infection, and gastrointestinal fluid loss can affect the patient’s overall clinical status.

These MCQs test your ability to interpret biochemical test results in the context of differential diagnoses, integrating clinical symptoms with laboratory findings.

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13
Q

BIOLOGICAL CAUSES OF VARIATION
• As well as analytical variation, test results also show biological variation in both health and disease.
• Key questions are:
• How do results vary in health?
• How do results vary in disease?
Explain how results vary in disease
Explain how results vary in health

A

How do results vary in health?
• The concentrations of all analytes in blood vary with time due to diverse physiological factors WITHIN the individual.
• There are also differences BETWEEN individuals.

B How do results vary in disease?
• Biochemical test results do not exist in isolation.
• For example, in a patient with severe abdominal pain, tenderness and rigidity, there may be several differential diagnoses to consider - including, for example,
• acute pancreatitis
• perforated peptic ulcer and
• acute cholecystitis.

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14
Q

State five causes of within individual variations under biological causes of variations

A

So, “within-individual” is like how you change over time, and “between-individual” is how you’re different from other people!

Within-individual variation
• The following may be important causes of within individual variation:
DIET: Variations in diet can affect the results of many tests, including serum triglyceride
• TIME OF DAY: Several plasma constituents show diurnal variation (variation with the time of day), or a sleep/wake cycle. Example is cortisol
• POSTURE: Proteins and all protein-bound constituents of plasma show significant differences in concentration between blood collected from upright individuals and blood from recumbent individuals. People in the upright position generally have lower protein concentrations compared to those in the recumbent (lying down) position. This is due to the effects of gravity on the distribution of fluids in the body:

•	Upright Position: In this position, blood is pooled in the lower extremities, and there is a relative decrease in the concentration of proteins in the blood plasma due to increased fluid shift into the lower parts of the body.
•	Recumbent Position: When lying down, the blood is more evenly distributed throughout the body, and the concentration of plasma proteins tends to be higher as there is less pooling in the lower extremities.

Within-individual variation cont’d
• MUSCULAR EXERCISE: Recent exercise, especially if vigorous or unaccustomed, may increase serum creatine kinase (CK) activity in blood [lactate], and lower blood [pyruvate].
• MENSTRUAL CYCLE: Several substances show variation with the phase of the cycle. Examples include serum [iron], and the serum
concentrations of the pituitary gonadotrophins
• DRUGS: These can have marked effects on chemical results.

Certainly! Here are five challenging MCQs focusing on within-individual variation and its impact on biochemical test results:

A study examines the effect of posture on serum albumin levels. Researchers find that serum albumin concentrations are significantly higher when blood is drawn from patients in an upright position compared to when drawn in a recumbent position. What is the most likely reason for this variation?

A) Increased protein synthesis during upright posture
B) Redistribution of fluids from plasma to interstitial spaces when upright
C) Enhanced renal excretion of albumin when lying down
D) Altered hepatic production of albumin in response to posture

Answer: B) Redistribution of fluids from plasma to interstitial spaces when upright

Explanation: Upright posture leads to fluid redistribution from the plasma to the interstitial spaces, which increases serum albumin concentrations compared to when lying down.

A patient undergoes routine blood testing for serum cortisol levels. The results show elevated cortisol levels in the early morning but normal levels later in the day. Which physiological factor is most likely responsible for this variation?

A) Dietary intake
B) Time of day
C) Physical exercise
D) Posture

Answer: B) Time of day

Explanation: Cortisol follows a diurnal rhythm, with higher levels in the early morning and lower levels throughout the day, reflecting the natural sleep/wake cycle.

A patient with a history of vigorous exercise shows elevated serum creatine kinase (CK) levels. How does recent muscular exercise primarily affect these CK levels?

A) Increases CK levels due to muscle damage and increased release of CK into the bloodstream
B) Decreases CK levels due to enhanced renal clearance of CK
C) Increases CK levels due to dietary influences
D) Decreases CK levels due to alteration in muscle metabolism

Answer: A) Increases CK levels due to muscle damage and increased release of CK into the bloodstream

Explanation: Vigorous or unaccustomed exercise can lead to muscle damage, resulting in increased serum CK levels as CK is released from damaged muscle tissues.

A study investigates the effects of the menstrual cycle on serum iron levels. Researchers find that serum iron levels are lower during the menstrual phase compared to other phases. What is the most likely reason for this variation?

A) Increased gastrointestinal absorption of iron during menstruation
B) Decreased total blood volume during menstruation
C) Altered hepatic iron storage during menstruation
D) Increased loss of iron through menstrual bleeding

Answer: D) Increased loss of iron through menstrual bleeding

Explanation: During menstruation, there is increased loss of iron due to menstrual bleeding, which can lower serum iron levels.

A patient is taking a medication that significantly affects their serum triglyceride levels. What is the most likely effect of this medication on the biochemical test results?

A) Consistent triglyceride levels regardless of medication use
B) Marked increase or decrease in triglyceride levels depending on the medication’s action
C) Altered protein-bound triglyceride concentrations without affecting total triglycerides
D) Reduced variation in triglyceride levels due to stabilized metabolic processes

Answer: B) Marked increase or decrease in triglyceride levels depending on the medication’s action

Explanation: Certain medications can significantly alter triglyceride levels, leading to marked increases or decreases depending on the medication’s effects on lipid metabolism.

These questions are designed to test deep understanding of how various factors can influence biochemical test results, especially focusing on within-individual variations.

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15
Q

State three causes of between individual variations under biological causes of variation

A

So, “within-individual” is like how you change over time, and “between-individual” is how you’re different from other people!

Between individual variation
• Differences between individuals can affect the concentrations of analytes in the blood. The following are the main examples:
• AGE: Examples include serum [phosphate] and alkaline phosphatase (ALP) activity
• SEX: Examples include serum creatinine, iron, uric acid and urea concentrations
• RACE: Racial differences have been described for serum [cholesterol] and [protein].
It may be difficult to distinguish racial from environmental factors, such as diet

Here’s a summary:

  • Serum Phosphate: Higher in children/adolescents due to bone growth; lower in adults; may increase in the elderly due to reduced kidney function.
  • Alkaline Phosphatase (ALP): Higher in children/adolescents due to active bone growth; lower in adults; may rise again in the elderly due to bone conditions.
  • Iron: Higher in males (no menstrual blood loss); lower in females (due to menstruation and pregnancy).
  • Creatinine: Higher in males due to greater muscle mass; lower in females.
  • Uric Acid: Higher in males due to purine metabolism; lower in pre-menopausal females (estrogen increases uric acid excretion).
  • Urea: Slightly higher in males due to higher protein intake and muscle mass; slightly lower in females.

Age and sex are important factors to consider when interpreting biochemical test results, as they significantly influence normal values.

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16
Q

What is analytical sensitivity
Analytical sensitivity is often referred to as what?
What is analytical specificity?

A

ANALYTICAL SENSITIVITY AND SPECIFICITY
• The analytical sensitivity of an assay is a measure of how little of the analyte the method can detect.
• The assay’s ability to detect very low concentrations of a given substance in a biological specimen.
• Analytical sensitivity is often referred to as the limit of detection (LoD).
• LoD is the actual concentration of an analyte in a specimen that can be consistently detected ≥ 95% of the time.

ANALYTICAL SPECIFICITY
• Analytical specificity of an assay relates to how good the assay is at discriminating between the requested analyte and potentially interfering substances.
• The assay’s ability to detect the intended target.

Example; you’ve taken a sample and you’re detecting maybe creatinine.
The assay will be analytically sensitive if it is able to detect even low concentrations of the creatinine in the sample.
Limit of detection is when the assay can consistently determine that the analyte or creatinine is in the sample more than or equal to 95% of the time.

Then specificity is the ability of the assay to detect the creatinine and distinguish it from urea or another analyte in the sample.

An analyte is a substance or chemical component that is being measured or analyzed in a laboratory test. For example, in a blood test, glucose, cholesterol, and electrolytes are all considered analytes because they are the specific substances being measured to assess a patient’s health.

17
Q

What are reference ranges
How do you interpret results

A

Reference intervals/ ranges are fundamental tools used by medical practitioners to interpret patient laboratory test results and help differentiate between healthy and unhealthy individuals.
• Also referred to as “normal” or “expected” values, reference intervals provide the range of laboratory test results that would be expected in a healthy population.
10/2/23
INTRODUCTION TO CHEMICAL PATHOLOGY
35
REFERENCE RANGES cont’d
• Results are therefore interpreted by comparing with a set of results from a particular defined (or reference) population.

18
Q

Before you can interpret results on patients adequately, state three things you need to know

A

To interpret results on patients adequately, we need to know:
• the reference range for healthy individuals of the appropriate age range and of the same sex;
• the values to be expected for patients with the disease, or diseases, under consideration

• Biochemical test results are usually compared to a reference interval chosen arbitrarily to include 95% of the values found in healthy volunteers.
• This means that, by definition, 5% of any population will have a result outside the reference interval

19
Q

What is diagnostic or test sensitivity
How is it calculated
How is specificity calculated?

A

Diagnostic/Test Sensitivity
• Sensitivity is the ability of a test to correctly identify individuals who have a given disease or condition.
• For example, a certain test may have proven to be 90% sensitive

sensitivity (the ability of a test to detect a disease when it is present), and specificity ( the ability of a test to reflect the absence of the disease in those disease-free) can be calculated as follows:
• Specificity= 100 x TN / (TN + FP) %
• Sensitivity = 100 x TP/ (TP + FN) %
• Where,
• TN=True negative
• TP= True positive
So specificity is you don’t have the disease. So whether the test strip says you have it or not. You don’t have the disease. If it says you have it and you don’t, it’s False positive. If it says you don’t have it and you really don’t, it’s TN. That’s why it’s TN + FP
Same for sensitivity

Here’s an explanation of True Positive (TP), True Negative (TN), False Positive (FP), and False Negative (FN) in the context of medical testing:

  • Definition: A True Positive occurs when a test correctly identifies a person as having the disease.
  • Example: If a person has a disease and the test result is positive, it is a True Positive.
  • Definition: A True Negative occurs when a test correctly identifies a person as not having the disease.
  • Example: If a person does not have the disease and the test result is negative, it is a True Negative.
  • Definition: A False Positive occurs when a test incorrectly identifies a person as having the disease when they do not.
  • Example: If a person does not have the disease, but the test result is positive, it is a False Positive.
  • Definition: A False Negative occurs when a test incorrectly identifies a person as not having the disease when they actually do.
  • Example: If a person has the disease, but the test result is negative, it is a False Negative.
  • Sensitivity (True Positive Rate) measures how well a test correctly identifies patients with the disease. A higher sensitivity means fewer false negatives.
  • Specificity (True Negative Rate) measures how well a test correctly identifies patients without the disease. A higher specificity means fewer false positives.

These concepts are crucial in understanding the effectiveness and reliability of diagnostic tests in medical practice.

20
Q

Explain true positives and true negatives and define diagnostic or test specificity

A

Diagnostic/Test Specificity
• Specificity is the ability of a test to correctly exclude individuals who do not have a given disease or condition.
• For example, a certain test may have proven to be 90% specific

When a test is said to have 90% specificity, it means that the test correctly identifies 90% of individuals who do not have the disease or condition. In other words:

  • Specificity (90%) indicates that out of all the people who do not have the disease, 90% will correctly receive a negative test result (True Negative), while 10% might incorrectly receive a positive result (False Positive).

In practical terms, a test with high specificity is good at ruling out individuals who are disease-free and thus minimizing the chance of false positives. This characteristic is particularly important when confirming the absence of a disease.

Remember that sensitive means it sees those who have it and so specificity will be the opposite of this

21
Q

State six attributes of a perfect test

A

PERFECT TEST
• Accurate
• Precise
• Discriminating-In the context of a “perfect” diagnostic test, “discriminating” refers to the test’s ability to effectively differentiate between individuals with the disease and those without it
• Pain free
• Risk free
• Inexpensive
• Useful

22
Q

CASE STUDY
• A sample from a 65-year-old male arrived in the laboratory at 9 am from a well-man clinic. The potassium is 8.5 mmol/L which is dangerously high.
The sample is repeated and the same result is obtained. All other laboratory checks have been carried out and the result is analytically valid. The result is telephoned to the GP who reveals that the sample was taken at 4 pm the previous day by the nurse.
(a) What is the most likely cause of the high result?
(b) What would your recommended course of action be?

A

Case Study Analysis:

Situation:
- A sample from a 65-year-old male shows dangerously high potassium levels (8.5 mmol/L).
- The sample was taken the previous day at 4 pm, but the result was only available at 9 am the following day.
- The result was repeated, and the same high level was confirmed.

(a) What is the most likely cause of the high result?

Answer:
The most likely cause of the high potassium result is hemolysis. Potassium is an intracellular ion, and when blood samples are mishandled or subjected to hemolysis (the breaking open of red blood cells), potassium can leak out of the cells into the serum, causing a falsely elevated measurement.

Reasoning:
- Hemolysis can occur due to several factors, such as improper handling of the blood sample, prolonged contact with the blood cells, or a traumatic venipuncture.
- Since the sample was taken a day before and the result remained consistently high upon retesting, the issue is likely related to sample handling or processing rather than an actual pathological condition.

(b) What would your recommended course of action be?

Answer:
1. Re-collect a Fresh Sample: Request a new blood sample from the patient to avoid the issues of hemolysis or other pre-analytical errors that may have affected the original sample.

  1. Ensure Proper Sample Handling: Verify and adhere to proper sample collection and handling procedures to prevent hemolysis, such as using appropriate blood collection techniques and promptly processing the sample.
  2. Review Laboratory Protocols: Check laboratory protocols to confirm that all procedures were correctly followed during the initial analysis and investigate potential issues in sample handling.
  3. Consult with the Physician: Inform the physician about the possibility of a hemolysis issue and discuss whether the initial high potassium level is consistent with the patient’s clinical symptoms or if it should be reassessed based on the new sample.

This approach ensures that the results are accurate and reflective of the patient’s true condition.

23
Q
A

(All reference intervals listed are for serum measurements in adults unless otherwise stated)
Alanine aminotransferase (ALT): 3-55 U/L
Albumin:35-50g/L
Alkaline phosphatase (ALP):30-130U/L
Aspartate aminotransferase (AST):12-48U/L
Amylase:70-100U/L
Bicarbonate:22-29mmol/l
Bilirubin (total):<21 micromol/L
Calcium (adjusted):2.2-2.6mmol/L
Chloride:95-108mmol/L
Cholesterol (total plasma):less than 5mmol/l (divide by 0.02586 to convert to mg/dL)
C-reactive protein (CRP):0-10mg/L
Creatine kinase(CK): 10-320 U/L (males)|
25-200 U/L (females)|
Creatinine:40-130micromol/l
Gamma glutamyl transpeptidase (yGD):less than 36U/l
Glucose (blood): 4.0-5.5 mmol/L (divide by 0.05551 to convert to mg/dL)
Glycated haemoglobin (HbA1c): 6-7% (42-53 mmol/mol Hb) taken to indicate good diabetic control
Hydrogen ion (H*)(arterial blood): 35-45 nmol/L
Iron:10-40 micromol/l
Transferrin percentage saturation: <50% (females)
<55% (males)
Lactate:0.7-1.8mmol/L
Lactate dehydrogenase (LDH): 230-525 U/L
Magnesium: 0.7-1.0mmol/L
Osmolality: a.275-295 mmol/kg (serum) b.50-1400 mmol/kg (urine)
PCO, (arterial blood): 4.6-6.0 kPa
ph (arterial blood):7.35-7.45
Phosphate:0.8-1.5mmol/L
POz (arterial blood):10.5-13.5kPa
Potassium:3.5-5.3mmol/L
Total Protein:60-80g/L
Sodium:133-146mmol/L
Triglyceride:less than 2.5mmol/L
Urate:200-430 micromol/L(males) 140-360 micromol/L(females)
Urea:2.5-7.8mmol/L

Table 5.2 Alphabetical list of reference intervals - endocrine (All reference intervals listed are for serum measurements in adults unless otherwise stated)
Cortisol:280-720 nmol/L (morning)|60-340 nmol/L (evening)|
Follicle-stimulating hormone (FSH):3-13 U/L (follicular phase) 9-18 U/L (mid-cycle)
1-10 U/L (luteal phase)
1-12 U/L (males)
Free androgen index (FAI):
36-156 (males)|<7 (females)|
Growth hormone (GH): <5microg/L
Human chorionic gonadotrophin (HCG): <5 U/L except in pregnancy
Insulin:<13 mU/L (multiply by 7.175 to convert to pmol/L)
Luteinizing hormone (LH):0.8-9.8 U/L (follicular phase) 17.9-49.0 U/L (mid-cycle) 0.6-10.8 U/L (luteal phase)
Oestradiol:180-1000 pmol/L (follicular phase)
500-1500 pmol/L (mid-cycle)
440-880 pmol/L (luteal phase)
<200 pmol/L (postmenopausal)
<150 pmol/L (males)
Parathyroid hormone (PTH): 1-6 pmol/l
Progesterone:>30 nmol/L in luteal phase taken to indicate ovulation
Prolactin:60-500 mU/L (females) 60-360 mU/L (males)
Sex hormone-binding globulin (SHBG): 30-120 nmol/L (females)
Testosterone:1.0-3.2 nmol/L (females) 11-36 nmol/L (males)|
Thyrold-stimulating hormone (TSH);0.4-4.0 mU/L
Free thyroxine (FT4):9-22nmol/L
Tri-iodothyronine(Total T3):0.9-2.6nmol/L

24
Q

chemical pathology class
clinical biochemistry is different from medial biochemistry

clinical biochemistry is focused on biochemiak basis of disease
medical biochemistry is for biochemical basis of the normal body

the test you want to order for must be indicated. yu can’t just order any test you want

all newborn babies are screened fir sickle cell

monitoring treatment:
prognosis:example is cancer staging

sources of variation in tests
pSA has low specificity
precision shows the reproducibility and amount of variation of a test.

getting the same results repeatedly is not the same as it being accurate.

SPT has higher analytical sensitivity as compared to UPT
for detection of cancer,your want a test that has high analytical sensitivity so you it’ll pick small or minute indications of the cancer

analytical specificity is high if the assay can differentiate between the analyte youre looking for and other interfering substances. no matter the kind of interfering substances in there.

analytical sensitivity is different from diagnostic sensitivity

for within individual variation, the factors are tings that if you testing the same individual, it will vary. example is muscular exercise. rigorous exercise can increase creatine kinase and in the same individual, if the person hasn’t exercised or anything, the creatine kinase will be normal
this is within individual variation

also, people who gym a lot have higher muscle bulk so their creatine kinase is higher whole in someone who doesn’t gym, creatine kinase may be lower. this is between individual variation

Alkaline phosphatase is higher in children than in adults cuz their bones are still developing

Uric acid is excreted better by females than males so they have less uric acid

A

Yes, that’s a useful distinction:

  • Clinical Biochemistry: Primarily deals with the biochemical basis of diseases, focusing on how abnormal biochemical processes cause or are a consequence of illness. It involves diagnostic testing and interpreting biochemical markers to monitor disease states, organ function, and treatment responses.
  • Medical Biochemistry: Focuses on the biochemical basis of the normal body functions, studying the chemical processes within cells and tissues that maintain health. It looks at metabolism, enzyme functions, and the molecular mechanisms that sustain life in a healthy organism.

Both fields are essential in understanding health and disease but have different scopes.

25
Q

Reference ranges are not absolute.
They just help you know if a value is Normal or not but it is not absolute
If someone who is a guy has a normal hb of 16 and now that hb is 13, the 13 is within the reference range for a guy but for that particular person, it’s not normal

You can’t interpret a PSA without age cuz as you age, PSA goes higher cuz as you age, your prostate naturally increases
So someone who will have a PSA outside the range may just be very old and wouldn’t have cancer or something but someone who is young having that PSA May have cancer

You compare results from a defined population or reference population

A body builder may have a higher creatinine or people with high muscle mass
So males have higher creatinine than females.

For the 95% for reference range, the rest of the five%, some were within the range and not health and some were outside the range but healthy

You won’t be asked reference range of stuff but in the med school, you’ll have to know

Example of this reference range problem is, you taking a sample in a wrong way and getting wrong results nu
It’s outside the reference range but it doesn’t reflect the disease state

Pre:before analysis is performed. Whether outside or inside Thhe lab.
Analytical: as you’re doing the test
Post: after test is done before test gets to doctor

Centrifuging blood samples is pre analytical and is part of sample processing
Putting samples in wrong containers
Interchanging people’s samples when centrifuging is also pre analytical

Trace elements containers: for testing something like zinc

Taking someone else’s sample for someone else for whatever reason is pre analytical

For control samples you already know the levels.

Analytical:
Not being aware which result is abnormal is analytical
Incubating stuff for less time than supposed to is also analytical due to personnel error.
Glucometer must be calibrated
If it’s not before you use it, it’s analytical
Storing samples at wrong temp is analytical ( you must measure temp of fridge in morning and evening)
Reagents integrity
Using Wrong anticoagulant-analytical sample
Using Hemolysed sample: analytical
Inadequate sample for the test(whyyyy)
Sequence identification error

HbA1c differences in sickle cell anemia cuz their RBCS destroy before 120 days

Person didn’t fast and has brought sample for a test that needs you to fast: pre

Result doesn’t reach physician ON TIME. This is post analytical
Lab doesn’t communicate panic values
Test not performed

Lab using glucometer is still POC
POC can be used anywhere. Glucometer can be used anywhere. Even at home. That’s why it’s POC.
Microalbumin is a good marker for early detection of kidney problem.
This is different from protein in urine.

Choice of specimen depends on the analyte to be measured and the ease of collection.
If there’s a test that can be measured using saliva and same test can give same results using blood, we would choose saliva.

Factors that will affect the choice of source of collection:
- [ ] The analyte under investigation
- [ ] Patients status
- [ ] Instrument being used for analysis
- [ ] The way the test has been developed; example if you want to measure an analyte in urine, used must be in urine
- [ ] Turnaround time: if you’re in a hurry and the test can use either plasma or serum, you’ll go for plasma cuz that is quicker

Serum is used for Protein electrophoresis cuz presence of fibrinogen and other protein in plasma will affect electrophoresis
Hb: whole blood
Blood gas: arterial blood

Biological Specimens
• Blood
• Urine
• Cerebrospinal Fluid

The first above three ar the majority of all samples analyzed.
• Amniotic Fluid
• Duodenal Aspirate
• Gastric Juice
• Gall stone
• Kidney Stone
• Stools
• Saliva
• Synovial Fluid
• Tissue Specimen

Choice of specimen type depends on
– Analyte to be measured
– Ease of collection

A
26
Q

Plasma is fluid component of blood.
Comprises ~55% of total volume of whole blood. Contains proteins, sugars,
vitamins,minerals, lipids, lipoproteins and
clotting factors.
95% of plasma is water

Whole Blood Whole Blood after centrifugation is separated different parts (plasma,Buffy coat and RBCS) and contains the above solutes.

Note: clotting has been prevented by adding anticoagulant

If blood is collected and allowed to stand it will clot. Formation of an
insoluble fibrin clot. If blood is then centrifuged the fluid portion is
known as SERUM

Whole blood after clotting contains the ff:

Plasma is fluid component of blood.
Comprises ~55% of total volume of
whole blood. Contains proteins, sugars,
vitamins,minerals, lipids, lipoproteins
No clotting factors
95% of plasma is water.
It is divided into blood clot and serum after centrifuging and clotting. The blood clot comprises of comprised of clotting factors (Fibrin,platets etc) and RBCs

A
27
Q

Source
– Veins
– Arteries
– Skin puncture-capillary blood

Capillary blood is obtained by pricking the skin, usually on the fingertip, heel (in infants), or earlobe, and collecting the small amount of blood that comes out. It is often used for tests where only a small sample is needed.

• Factors affecting choice of Blood Source and Collection
Method
– Analyte under investigation
– Patient:
• vascular status
• ease of collection

A patient’s vascular status influences the choice of blood source:

  1. Poor Venous Access: Capillary blood may be preferred if veins are hard to access due to dehydration, chronic illness, or obesity.
  2. Peripheral Vascular Disease (PVD): Poor circulation in extremities can make venous access difficult, requiring alternative veins or, in severe cases, central venous access.
  3. Edema: Swelling can dilute capillary blood, making venous blood a better option.
  4. Fragile/Damaged Veins: In elderly or frequent IV patients, smaller needles or capillary samples might be chosen for less invasive tests.

The decision depends on the patient’s condition and the type of test required.

Collection Method
– Syringe
– Evacuated tube:
• Additives
• Separator gel

Additives in evacuated tubes are used to prevent clotting, preserve the sample, or facilitate specific tests. The choice of tube depends on the test being performed and the need for either plasma, serum, or whole blood.

Blood Analysis
• Testing can be done on whole blood, serum or plasma. Choice
depends on a number of factors
• ANALYTE TO BE MEASURED
– Hematology often requires whole blood
• INSTRUMENTATION USED FOR ANALYSIS
– Most automated instruments are not set up for whole blood
analysis
• THE WAY THE TEST WAS DEVELOPED.
– Tests are often only validated on either plasma or serum: When a test is developed, it undergoes a validation process to ensure it works accurately and consistently with specific types of blood samples. Tests are often validated using plasma or serum, but not always both
• TURN AROUND TIME
– Analysis of whole blood is the quickest. No waiting for clot or
spinning
– Plasma requires centrifugation prior to analysis
– With serum, the blood must clot then you have to centrifuge

Blood Analysis in Chemical Pathology
• Since most tests in the chemical pathology lab
involve analytes that are dissolved in the fluid
portion of blood, serum or plasma are the
specimens of choice.
• Important exceptions include
– Hemoglobin, Red blood cell (RBC) Folate
– Blood gases
• Protein electrophoresis was developed based on
the analysis of serum. Not done on plasma
because of the presence of the protein fibrinogen
which distorts the electrophoretic pattern.
• Many tests can use either serum or plasma

Important Exceptions:

There are some tests where serum or plasma is not appropriate:

•	Hemoglobin Tests: Hemoglobin is found inside red blood cells (RBCs), not dissolved in the fluid part of the blood. For hemoglobin measurements, whole blood (containing RBCs) is required.
•	RBC Folate Tests: Folate levels inside red blood cells are sometimes measured for a more accurate representation of long-term folate levels, so whole blood is needed.
•	Blood Gases: Blood gas tests (e.g., for oxygen and carbon dioxide levels) are usually done on whole blood because they measure gases dissolved in the blood, along with pH and electrolytes, which require the intact blood components for accurate analysis.
  1. Protein Electrophoresis and Serum:• Protein electrophoresis is a test that separates proteins in the blood to diagnose certain conditions (like multiple myeloma).
    • This test is performed on serum, not plasma, because plasma contains fibrinogen, a protein involved in blood clotting.
    • Fibrinogen can interfere with the electrophoresis results, causing distortion of the protein patterns, which makes it difficult to get accurate measurements.

Collection Tubes
• The ideal tubes used for blood collection are
evacuated tubes (Vacutainers)
– Negative pressure facilitates collection: Negative pressure means that there is a vacuum inside the collection tube before it is used. This vacuum creates a pressure difference between the inside of the tube and the outside environment (where the blood is).
• When the needle pierces the vein and the tube is connected to the needle, the vacuum pulls blood from the vein into the tube. This happens because blood naturally flows from areas of higher pressure (the vein) to areas of lower pressure (the vacuum inside the tube).
– Easy to use
– Sterile
– Universally used colour-coded rubber stoppers
to denote tube type.
– Tubes can contain various anticoagulants for
the collection of whole blood or plasma.
– Tubes can have additives for specific tests
(glucose, metals)

A

Heparinized syringe is used to take arterial blood sampling.

A heparinized syringe will give plasma after centrifugation.

Heparin prevents clotting by inhibiting thrombin, allowing the blood to remain in its liquid state. When the blood is centrifuged, it separates into plasma (the liquid portion containing clotting factors), the buffy coat (white blood cells and platelets), and red blood cells.

If the blood were allowed to clot (without an anticoagulant), the liquid portion would be serum, which lacks clotting factors like fibrinogen.

Fluoride oxalate sample bottle is used to take calcium lactate and alcohol. This sample bottle gives plasma.
Lithium heparin anticoagulant gives plasma too and is for general use
EDTA anticoagulant gives plasma and is for whole blood analysis, rbc analysis,lipids and lipoproteins analysis

While EDTA tubes are not typically used for routine lipid profiles (e.g., cholesterol, triglycerides, HDL, LDL), they can be used in specialized tests that measure lipoprotein subfractions and certain lipid-related parameters.
In particular, EDTA is used in research or specialized clinical settings when the analysis requires the preservation of the exact lipoprotein structure and to prevent changes in lipoprotein particles that might occur during sample storage

Plain tube containing SST gel will give you serum and is used for general purposes.

SST gel stands for Serum Separator Tube gel, which is a specialized substance used in blood collection tubes. The gel acts as a barrier between the serum (the liquid portion of the blood after clotting) and the cellular components (red blood cells, white blood cells, and platelets) when the blood sample is centrifuged.

SST tubes typically contain a clot activator to promote clot formation, and after centrifugation, the gel settles between the serum and the cells. This allows for easy separation of the serum for laboratory analysis while preventing contamination from the blood cells. SST tubes are commonly used in clinical chemistry tests.

Plain tube without an anticoagulant also gives serum

Trace Element collection tube also gives serum