Chapter 8 Flashcards

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1
Q

metabolism

A

totality of an organism’s chemical reactions

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2
Q

metabolic pathway

A
  • begins with a specific molecule that is altered in a series of defined steps, resulting in a certain product
  • each step catalyzed by a specific enzyme: balance supply and demand
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3
Q

catabolic pathway

A

ex: cellular respiration

energy stored in organic molecules becomes available to do the work of the cell

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4
Q

anabolic pathway

A

consume energy to build complicated molecules from simpler ones
ex: synthesis of an amino acid from simpler molecules and of proteins from amino acids

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5
Q

energy

A

the capacity to cause change

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6
Q

kinetic energy

A

energy associated with the relative motion of objects

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7
Q

thermal energy

A

kinetic energy associated with the random movement of atoms or molecules
in transfer from one object to another is called heat

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8
Q

potential energy

A

non-kinetic energy, based on location

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9
Q

chemical energy

A

potential energy available for release in a chemical reaction

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10
Q

thermodynamics

A

the study of energy transformations that occur in a collection of matter

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11
Q

isolated vs open system

A

ability to exchange either energy/matter with surroundings

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12
Q

1st law of thermodynamics

A

energy cannot be created or destroyed, only exchanged and transformed

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13
Q

2nd law of thermodynamics

A

entropy of the universe is always increasing

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14
Q

entropy

A

the measure of disorder

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15
Q

spontaneous process

A

a process that leads to an increase in entropy and can proceed without an input of energy

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16
Q

free energy

A

delta G; the portion of a system’s energy that can perform work when temperature and pressure are uniform
when spontaneous delta H must be negative or TdeltaS must be positive

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17
Q

deta G=

A

delta H-Tx delta S

G(final)-G(initial)

18
Q

negative free energy vs positive

A

negative=spontaneous (decreases the free energy)

positive=nonspontaneous

19
Q

ATP

A

ribose+nitrogenous base (adenine)+triphosphate group

phosphate groups broken with hydrolysis

20
Q

hydrolysis in ATP

A
  • when the terminal phosphate bond is broken by hydrolysis, inorganic phosphate leaves ATP and the molecule becomes ADP; exergonic rxn
  • can perform three types of work 1) chemical, 2) transport, 3) mechanical
21
Q

endergonic rxn free energy

A

if delta G of an endergonic reaction is less than the amount of energy released by ATP hydrolysis, the two can be coupled so that together they are exergonic

22
Q

phosphorylated intermediate

A

recipient molecule with the phosphate group covalently bonded to it, promote crucial protein shape changes during cellular processes

23
Q

regeneration of ATP

A

by addition of phosphate to ADP, free energy required to phosphorylate ADP comes from exergonic breakdown reactions in cell=ATP cycle process is endergonic

24
Q

cellular respirations provides…

A

energy for ATP process

25
Q

how do plants produce ATP?

A

use light energy

26
Q

enzymes

A

macromolecule that acts as a catalyst

27
Q

catalyst

A

chemical agent that speeds up the reaction without being consumed by the reaction

28
Q

activation energy

A

the energy reactants must absorb before a chemical reaction will start, often supplied by heat

29
Q

transition state

A

when the molecules have absorbed enough energy for the bonds to break, the reactants are unstable

30
Q

how does an enzyme catalyze a reaction?

A

by lowering activation energy barrier and enabling the reactant molecules to absorb enough energy to reach the transition state even at moderate temperatures
**cannot change free energy

31
Q

substrate

A

reactant an enzyme binds to the enzyme and where catalysis occurs

32
Q

induced fit

A

entry of substrate, change in the shape of the active site of the enzyme so the bind is more snug

33
Q

cofactors

A

nonprotein helper for catalytic activity, may be tightly bound to enzyme or loosely and reversibly
* inorganic=cofactor, organic=coenzyme

34
Q

inhibitors

A

inhibit active site of specific enzymes=preventing catalysis

35
Q

competitive inhibitors

A

reduces activity of enzyme by entering the active site in the place of the substrate (whose structure it mimics), overcome by increasing the concentration of substrate

36
Q

noncompetitive

A

impede enzymatic reactions by binding to another part of the enzyme and thus changes its shape

37
Q

allosteric regulation

A

where a protein’s function at one site is affected by the binding of a regulatory molecule to a separate site=either results in inhibition or stimulation
controls the rates of important reactions in metabolic pathways

38
Q

enzymes in allosteric regulation

A

usually have two or more subunits with individual active sites and oscillates between it

39
Q

activator

A

binds so only the active form is kept

40
Q

inhibitor

A

binds so only the inactive form is kept

41
Q

cooperativity

A

a type of allosteric regulation where a shape change in one subunit of a protein caused by substrate binding is transmitted to all the other subunits, facilitating binding of additional substrate molecules to those subunits

42
Q

feedback inhibition

A

a method of metabolic control in which the end product of a metabolic pathway acts as an inhibitor of an enzyme within that pathway