Chapter 2: Cell structure and function Flashcards
Cell envelope
It is a series of layered structures surrounding cytoplasm and governing interactions with the environment.
It includes:
Cytoplasmic membrane
Cell Wall
Outer membrane
S-layers (capsules and slime layers)
Cytoplasmic membrane
Also called plasma membrane
Surrounds cytoplasm
its main function is selective permeabilty so nutrients enter and wastes leave and membrane proetins facillitate these reactions and functions in energy metabolism
Plasm membrane structure
8-10nm wide
It is a phospholipid bilayer containing embedded proteins
It contains both hydrophobic fatty acid tails and hydrophilic glycerol and phosphate and other functional groups
The fatty acids associate inwards to form hyrdrophobic environment and the hydrophilic head groups remain exposed to external environment and cytoplasm
membrane proteins
Embedded proteins: Integral membrane proteins
Transmembrane proteins: extend completely across membrane
Peripheral membrane proteins; Loosely attached
Domains
Bacteria
Archae
Eukarya
Archael cytoplasmic membranes
-Ether linkages
-Archael lipids have isoprenes instead of fatty acids
-Major lipids are phosphoglycerol diethers with phytanyl C20 side chains and diphosphoglycerol tetra
-Many different isoprenoid chains including ring structures
Cytoplasmic membrane function
-Permeability barrier
* Polar and charged molecules must be transported
* Transport proteins accumulate solutes against concentration gradient
-Protein anchor
*Holds proteins in place
_energy conservation and consumption
* Generation of proton motive force
Eukaryotic plasma membrane
-Eu and Bac have ester linkages
-Contain Carbohydrates that function as attachment and receptor sites
-Contains Glycoproteins
-Contains sterols
*HUmans contain cholestral while fungal cells contain ergosterol
NB antifungal target
Ergosterol in membrane
Active transport mechanisms
-Simple transport
-Group translocation
-ABC system
Simple transport
-Driven by proton motor force
-Either symport: solute and H+ cotransported in one direction
-Or antiport: Solute and H+ transported in different directions
Group translocation
-Substance transport is chemically modified
-Energy-rich organic compound (not proton motive force) drives transport
-Best studied
E.Translocation
Phosphotransferase system in E.coli
-glucose, fructose and mannose
-5 proteins required
-energy from phosphoenolpyruvate
ABC transporter system
ABC= ATP binding cassette
-200 different systems for organic and inorgnic
-Substrate binding proteins outside of cell have high substrate affinity
-ATP drives uptake
-Binding protein binds to target and brngs it to transporter. Transporter breaks down ATP to transport target across
What type of organisms prefer ABC transporters
EXtremophiles as they are under stress with limited resources and ABC allow them to find specific substances in small concentrations
Cell Wall
-Needs to withstand osmotic/turgor pressure to prevent cell lysis
-Maintains cell shape and rigidity
-Bacteria seperated into two groups based off gram stain
Gram positive
envelope contains cytoplasmic membrane and thick cell wall with many layers of peptidoglycan
stains purple
Gram negative
Envelope consistes of membrane, thin cell wall with very little peptidoglycan, outermembrane and periplasm
stains pink
Bacterial cell wall component
It contains glycan tetrapeptide which is made up of:
-Sugar backbone (alternating modiefed glucose made of NAG and NAM joined by B1-4 linkages
-The linkage is what is targeted
-Short peptides are joined to NAM like L-alanine, D-alanine, D-glutamic acid, L-lysine or DAP
NAG
N-acetylglucosamine
NAM
N-acetylmuramic acid
DAP
diaminoplimelic acid
Go over diagram of gram positive
DIagram of Gram negative