Chapter 10- genetic recombo Flashcards
Evolution
A process by which populations undergo change through the natural selection of certain individuals in the population based on heritable traits
Asexual reproduction
A reproductive process that generates two identical daughter cells from a parental cell
Genetic recombination
Development of new combinations of genetic information to generate genetic variability
Scientists who used interrupted-mating experiments to map genes on the E. coli chromosome
Francois Jacob and Elie Wollman
Demonstrated transformation in bacteria
Fred Griffith
Demonstrated transduction in Salmonella typhimurium
Joshua Lederberg and Norton Zinder
Discoverer of the bacterium that helped lay the foundations for our understanding of recombination
Theodore Escherich
Proved that DNA is the transforming factor
Oswald Avery
Bacteriophages that follow a lytic life cycle
virulent phages
Bacteriophage that follows the lysogenic cycle
temperate phages
A tubelike structure that bacteria develop to connect one cell to another
sex pilus
The form of a temperate phage when it is incorporated into the host chromosome
a prophage
The state of bacteria after receiving DNA from another cell but before undergoing genetic recombination
partial diploid
Where a bacterium absorbs DNA released by other dead bacteria
transformation
Where a virus transfers DNA from one bacterium to another
transduction
Refers to determining the location of the genes on a chromosome
genetic map
Mutants that require additional nutrients added to the minimal medium .
auxotroph
Transformation
- Bacteria take up pieces of DNA that are released into the environment as other cells disintegrate
- Fred Griffith discovered when studying how bacteria cause pneumonia in mice
Transduction
-DNA is transferred from donor to recipient cells inside head of an infecting bacterial virus
o Bacteriophage = infection cycles of viruses that infect bacteria
-in general, transduction begins when new phages assemble in infected bacterial cell
-they sometimes incorporate fragments of host cell DNA along with (or instead of) viral DNA
-after the host cell is killed, new phages that are released may then attach to another cell and inject bacterial cell (and viral DNA if present) into that recipient cell
-the introduction of this DNA, as in conjugaton and transformation, makes the recipient cell a partial diploid and allows recombination to take place
-Recipients are NOT killed b/c they have received bacterial DNA and not infective viral DNA
o 2 types of transfuction: generalized and specialized
Generalized transduction
-generalized transduction, in which all donor genes equally likely to be transferred, is associated with some virulent bacteriophages, which kill their host cells during each cycle of infection (lytic cycle)
-During infection by virulent phage, host bacterial chromosome is degraded to provide raw material for synthesis of new phage chromosomes
-However, sometimes a fragment of host chromosome avoids degradation and is packed into head of new phage by mistake
-This phage now contains small random sample of bacterial instead of phage genes
-When host cell is burst to release new phage, this “transducing phage” can mechanically
infect recipient cell, however, it will deliver a linear piece of DNA from the donor cell rather than an infectious phage chromosome
-Newly infected (and incredibly lucky) recipient cell will survive; incoming DNA may then
pair, and recombine, with homologous regions on recipient chromo
Specialized transduction
-Phage lambda, one of most extensively studied bacteriophages, infects E. coli
- Lambda is a temperate bacteriophage—when it first infects new host, it determines whether
host likely to be a good one (is it starving? Suffering from DNA damage?)
-if host cell passes molecule health checkup, lambda chromosome lines up w/ small region of homology on bacterial chromosome and a phage-coded enzyme catalyzes a single recombination event. The phage is thus integrated into host chromosomal DNA, and in this state, is called a prophage (overall, mechanism is similar to integration of F factor discussed previously)
- the prophage is then replicated and passed to daughter cells along with rest of the bacterial chromosome as long as conditions remain favourable (lysogenic cycle)
- If host cell inhospitable (e.g. UV DNA damage), prophage activates several genes,
releases itself from chromosome by a recombination event, and proceeds to manufacture new
phage, which are released as cell bursts as a result of lytic growth
-in specialized transduction, the “mistake” occurs when the prophage is excised from chromosome
-Sometimes this recombination event is imprecise; bacterial DNA is removed from host chromosome, and some prophage DNA is left behind. As a result, this bacterial DNA is packaged into new phage and carried to recipient cells
-Since the transducing phage is defective (having left some genes behind in host), it does not kill its new host
*in case of specialized transduction, only bacterial genes close to integration site of phage
will ever be incorporated into phage chromosome by recombination mistake
· Typically, only genes coding for galactose and biotin metabolism are transferred
at high frequency by phage lambda
similarities between conjugation, transformation and transduction
all ways in which DNA from two different bacterial cells is brought into close proximity.
- Homologous regions may then pair and recombine to give rise to a recipient cell that carriers a different collection alleles than it had previously.
- Overall, these processes create more diversity in the DNA sequence among memers of a population than would arise by mutation and binary fission alone. More diversity leads to a higher likelihood that at least some individuals will be well suited to survive changes in the environment
Differentiate between a phage and a prophage
A bacteriophage is the infectious form of a virus whereas a prophage is the form when the phage DNA is integrated into the host’s chromosome.
Compare and contrast the type of transduction process of bacteriophage P22 with that of bacteriophage λ.
P22 encodes an enzyme that degrades the host DNA into short fragments which can become integrated in a random fashion when the phage particles assemble; in bacteriophage λ, the phage chromosome becomes integrated into a specific region of the host’s chromosome; when triggered to excise the phage may accidentally remove a host gene on either side of the prophage ( gal or bio)