Chapter 1 - Structure & Function Of Proteins - Class 1 - Sept 06, 2024 Flashcards

1
Q

The main molecule in biochemistry

A

Enzyme

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2
Q

Four levels of proteins

A
  1. Primary
  2. Secondary
  3. Tertiary
  4. Quaternary
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3
Q

6 main functions of proteins

A
  1. Mechanical function
  2. Enzyme: biocatalyst
  3. Oxygen carriage: hemoglobin (quaternary structure)
  4. Regulatory signals: insulin (ligand)
  5. 6.
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4
Q

Simple proteins are composed only of

A

Amino acids

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5
Q

Proteins composed of additional elements such as heme and not only amino acids are

A

Conjugated proteins

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6
Q

Proteins are major nitrogen-containing compounds composed of 5 major elements

A
  1. Carbon
  2. Oxygen
  3. Nitrogen
  4. Hydrogen
  5. Sulphur
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7
Q

Amino acids used to construct proteins must be:

A
  1. L-configuration
  2. Alpha carbon
  3. Optically active
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8
Q

All amino acids are optically active or chiral except

A

Glycine

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9
Q

Classification of amino acids based on the R group

A
  1. Neutral non polar (aliphatic or aromatic R groups)
  2. Neutral polar (uncharged)
  3. Acidic
  4. Basic
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10
Q

Only imino acid

A

Proline, Pro, P

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11
Q

Two important aromatic, neutral non-polar amino acid

A
  1. Phenylalanine, Phe, F
  2. Tryptophan, Trp, W
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12
Q

Neutral polar amino acid that can form disulfide bonds

A

Cysteine, Cys, C

bond creates cystine
SH—SH becomes S—S

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13
Q

3 Neutral polar amino acids whose side chains form hydrogen bonding

A
  1. Serine, Ser, S
  2. Threonine, Thr, T
  3. Tyrosine, Tyr, Y
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14
Q

All amino acids are ampholytes in solution and the ionization state varies with

A

pH

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15
Q

Ultraviolet Absorption of 280nm occurs in proteins with these 3 amino acids

A
  1. Tryptophan (Trp)
  2. Tyrosine (Tyr)
  3. Phenylalanine (Phe)
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16
Q

There are usually 4 different non-covalent interactions in the protein structure

A
  1. Charge-charge interactions
  2. Hydrogen bond
  3. Van der waals
    4.