CH 25 Powerpoint/Study Guide Flashcards

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1
Q

What is meant by eukaryotes being “combination organisms”?

A

Eukaryotes have traits from both archaeal and bacterial ancestors due to the engulfment of bacteria by archaea, leading to organelles like mitochondria.

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2
Q

What is the significance of the cytoskeleton in early eukaryotes?

A

The cytoskeleton allowed early eukaryotes to change shape and move, enabling them to engulf other cells.

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3
Q

What key event led to the origin of mitochondria in eukaryotes?

A

The engulfment of an aerobic bacterium by an ancestral Archaeal cell.

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4
Q

What are the key similarities between the membranes of mitochondria/plastids and prokaryotic cells?

A

The inner membranes of mitochondria and plastids resemble prokaryotic plasma membranes in both structure and function, supporting the idea that mitochondria and plastids originated from ancestral prokaryotes through endosymbiosis.

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5
Q

How do mitochondria and plastids divide, and how does this support the endosymbiotic theory?

A

They divide similarly to prokaryotes by binary fission, supporting their bacterial origin.

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6
Q

What type of DNA do mitochondria and plastids contain, and why is this important?

A

They contain circular DNA, similar to prokaryotes, reinforcing the idea that they originated from bacteria.

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7
Q

What is the similarity between ribosomes in mitochondria/plastids and prokaryotic ribosomes, why is it important?

A

Ribosomes in Mitochondria, Plastids, and Prokaryotes are all size 70S, It shows that these organelles share a common evolutionary origin with bacteria.

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8
Q

What is serial endosymbiosis?

A

The theory that mitochondria evolved first, followed by plastids, in a sequence of endosymbiotic events.

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9
Q

What type of organism gave rise to plastids in red and green algae?

A

Cyanobacteria, through primary endosymbiosis.

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10
Q

Which two algal lineages arose from primary endosymbiosis?

A

Red algae and green algae.

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10
Q

What is the difference between primary and secondary endosymbiosis?

A

Primary endosymbiosis involves a prokaryote being engulfed by a eukaryote, while secondary endosymbiosis involves a eukaryotic cell that already contains a primary plastid being engulfed by another eukaryote.

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11
Q

What is a nucleomorph, and where is it found?

A

A nucleomorph is a vestigial nucleus found in some organisms that underwent secondary endosymbiosis, such as chlorarachniophytes

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12
Q

What is the evidence that plastids in red and green algae originated from cyanobacteria?

A

Plastids have two membranes, similar to cyanobacteria, and homologous transport proteins in their membranes.

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13
Q

Why do we think secondary endosymbiosis played a part in the evolution of certain algae?

A

The presence of a nucleomorph and multiple membranes around plastids in some protists suggests secondary endosymbiosis.

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14
Q

Which two groups of algae were involved in secondary endosymbiosis?

A

Red algae and green algae.

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15
Q

Provide an example of an organism that evolved through secondary endosymbiosis.

A

Euglenids evolved when a green alga was engulfed by a heterotrophic eukaryote.

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16
Q

What is the role of cyanobacteria in the evolution of photosynthetic eukaryotes?

A

Cyanobacteria were engulfed by early eukaryotes, leading to the formation of plastids in red and green algae through primary endosymbiosis.

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17
Q

How does the structure of ribosomes in mitochondria support the endosymbiotic theory?

A

The ribosomes are more similar to prokaryotic ribosomes, suggesting a bacterial origin.

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18
Q

What is the function of a nucleomorph, and what does it indicate about a cell’s evolutionary history?

A

A nucleomorph is a remnant of the engulfed cell’s nucleus in secondary endosymbiosis, indicating a more complex evolutionary history involving multiple engulfment events.

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19
Q

What features of mitochondria and plastids suggest they were once free-living prokaryotes?

A

Their circular DNA, prokaryotic-like division, and prokaryote-sized ribosomes suggest they were once free-living bacteria.

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20
Q

How did secondary endosymbiosis contribute to the diversity of eukaryotes?

A

By creating new lineages of protists, such as chlorarachniophytes and euglenids, through the engulfment of photosynthetic eukaryotes.

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21
Q

What evidence suggests that mitochondria evolved before plastids?

A

Mitochondria are found in nearly all eukaryotes, whereas plastids are only found in specific groups, indicating that mitochondria evolved first.

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22
Q

What are the four supergroups of eukaryotes?

A

Excavata, SAR, Archaeplastida, Unikonta.

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23
Q

How is the eukaryotic domain currently classified based on molecular and morphological data?

A

Into four supergroups (Excavata, SAR, Archaeplastida, Unikonta).

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24
Q

Why was the kingdom Protista abandoned in modern classifications?

A

Protists are polyphyletic, with some groups more closely related to animals, plants, or fungi than to each other.

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25
Q

Why are amitochondriates no longer considered the oldest lineage of eukaryotes?

A

Amitochondriates were found to have reduced mitochondria, not a complete absence of them.

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26
Q

What is the significance of dotted lines in the eukaryotic tree?

A

They indicate clades under active debate, showing that the relationships between groups are unresolved.

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27
Q

What does it mean when the root of the eukaryotic tree is referred to as unresolved?

A

It means scientists are still uncertain about the common ancestor of all eukaryotes and how they are related.

28
Q

Do multicellular organisms form a monophyletic clade?

A

No, multicellularity evolved independently in several lineages like plants, animals, fungi, and some protists.

29
Q

Do photosynthetic lineages form a monophyletic clade?

A

No, photosynthesis evolved independently in different lineages like plants, algae, and some protists.

30
Q

Excavata - Diplomonads (Giardia)
What are the characteristics of the supergroup Excavata?

A

Members are characterized by their cytoskeleton and an excavated feeding groove in some species.

31
Q

Excavata - Diplomonads (Giardia)
What is a mitosome, and how does it function in diplomonads like Giardia?

A

A mitosome is a reduced mitochondrion that lacks an electron transport chain, so diplomonads derive energy anaerobically.

32
Q

Excavata - Diplomonads (Giardia)
How is Giardia transmitted, and what disease does it cause?

A

Giardia is transmitted through contaminated water, causing Giardiasis (an intestinal infection).

33
Q

Excavata - Diplomonads (Giardia)
How do diplomonads like Giardia move?

A

They move using multiple flagella.

34
Q

SAR Clade - Stramenopiles (Diatoms)
What are the two major features of stramenopiles?

A

They have a hairy flagellum paired with a smooth flagellum.

35
Q

SAR Clade - Stramenopiles (Diatoms)
What are the tests (shells) of diatoms made of?

A

They are made of silica (glass-like material).

36
Q

SAR Clade - Stramenopiles (Diatoms)
Why are diatoms ecologically important?

A

Diatoms are important photosynthetic organisms, contributing significantly to marine primary production and carbon cycling.

37
Q

SAR Clade - Stramenopiles (Diatoms)
What is diatomaceous earth, and how is it formed?

A

Diatomaceous earth is formed from fossilized diatom shells (silica walls) that accumulate on the ocean floor.

38
Q

SAR Clade - Alveolates (Dinoflagellates, Plasmodium, Paramecium):
What characteristic defines the alveolates?

A

Alveolates have membrane-bound sacs (alveoli) just under the plasma membrane.

39
Q

SAR Clade - Alveolates (Dinoflagellates, Plasmodium, Paramecium):
Did alveolates arise from primary or secondary endosymbiosis?

A

Secondary endosymbiosis of red algae.

40
Q

Dinoflagellates
What are the symbioses for which dinoflagellates are known?

A

Some dinoflagellates, like zooxanthellae, have a symbiotic relationship with coral, providing nutrients to the coral.

41
Q

Dinoflagellates
What harm can dinoflagellates cause?

A

Dinoflagellates can cause harmful algal blooms, known as red tides, which release toxins that can kill marine life and cause human illness.

42
Q

Dinoflagellates
Are dinoflagellates autotrophic, heterotrophic, or mixotrophic?

A

Some are autotrophic, some are heterotrophic, and some are mixotrophic (both).

42
Q

Dinoflagellates
How many flagella do dinoflagellates have, and what are they used for?

A

Dinoflagellates have two flagella, used for movement.

43
Q

Plasmodium (Apicomplexan):
Which disease is caused by Plasmodium?

A

Malaria.

44
Q

Plasmodium (Apicomplexan):
What are the two hosts in Plasmodium’s life cycle?

A

Humans and mosquitoes.

45
Q

Plasmodium (Complexan):
In which hosts do the sexual and asexual reproductive stages of Plasmodium occur?

A

Sexual reproduction occurs in mosquitoes, and asexual reproduction occurs in humans.

46
Q

Plasmodium (Complexan):
What is an apicoplast, and what is its function in Plasmodium?

A

The apicoplast is a modified plastid, derived from red algae, involved in lipid biosynthesis and iron metabolism.

47
Q

Plasmodium (Apicomplexan):
What is the function of the apical complex in Plasmodium?

A

The apical complex is used by the parasite to penetrate host cells.

48
Q

Paramecium (Ciliates):
How do paramecia increase genetic diversity?

A

Through conjugation, which involves exchanging haploid micronuclei between two cells.

49
Q

Paramecium (Ciliates):
What structures do paramecia use for movement?

A

Paramecia use cilia to move.

50
Q

Paramecium (Ciliates):
What is the function of the contractile vacuole in paramecia?

A

It expels excess water from the cell.

51
Q

SAR Clade - Rhizarians (Foraminiferans):
What are the tests of foraminiferans made of?

A

Calcium carbonate (CaCO3).

52
Q

SAR Clade - Rhizarians (Foraminiferans):
How do foraminiferans move and feed?

A

They use threadlike pseudopodia that extend through pores in their shells.

53
Q

SAR Clade - Rhizarians (Foraminiferans):
Are foraminiferans autotrophic or heterotrophic?

A

They are heterotrophic, though many have endosymbiotic algae.

54
Q

Archaeplastida - Red Algae:
What is unique about the photosynthetic pigments of red algae?

A

They have a red accessory pigment called phycoerythrin, which allows them to absorb light at greater depths.

55
Q

Archaeplastida - Red Algae:
Why are red algae important in tropical coastal ecosystems?

A

Red algae are the most abundant large algae in tropical coastal waters and play a major role in the ecosystem.

56
Q

Archaeplastida - Red Algae:
How does the color of red algae change with depth?

A

They appear greenish-red in shallow water and dark red or almost black in deep water.

57
Q

Archaeplastida - Green Algae ( Chlorophytes and Charophytes):
What pigment gives green algae their color?

A

Chlorophyll gives them their green color.

58
Q

Archaeplastida - Green Algae:
What are the two main types of green algae?

A

Chlorophytes and Charophytes.

59
Q

Archaeplastida - Green Algae:
Which group of green algae is most closely related to land plants?

A

Charophytes are closely related to land plants.

60
Q

Archaeplastida - Green Algae (Chlorophytes and Charophytes):
Where are chlorophytes commonly found?

A

They are found in freshwater, marine, and terrestrial environments.

61
Q

Unikonta - Amoebozoans (Amoeba):
What is the function of pseudopodia in amoebas?

A

Pseudopodia are used for movement and feeding.

62
Q

Unikonta - Amoebozoans (Amoeba):
What is the difference between the pseudopodia of amoebozoans and those of rhizarians?

A

Amoebozoans have lobe-shaped pseudopodia, while rhizarians have threadlike pseudopodia.

63
Q

Unikonta - Amoebozoans (Amoeba):
In what environments are amoebas commonly found?

A

Amoebas are found in freshwater, marine, and soil environments.

64
Q

What ecological role do diatoms play in marine ecosystems?

A

Diatoms contribute significantly to carbon fixation and are key components of the marine food web.

65
Q

What is the biological pump, and how are diatoms involved?

A

The biological pump involves the removal of CO₂ from the atmosphere and its transfer to the ocean floor through the sinking of dead diatoms

66
Q

How do warmer sea surface temperatures affect marine producers like diatoms?

A

Warmer temperatures prevent upwelling, reducing nutrient availability and limiting.