centrifugation Flashcards
what is centrifugation
a method to separate particles by applying centrifugal force. this depends on size, density and shape
what can centrifugation determine
molecular weight
density
shape
changes to any of the above
what is an interfering substance
a substance that is difficult to remove - this is possible with different sedimentation rates
what changes the sedimentation rate
centrifugal force
density difference to liquid
size and shape
viscosity
how do you calculate the relative centrifugal force
RCF = 1.118r (n/1000)^2
r = radius (mm) n = rpm
OR
use a nomogram
RCF is not uniform in a centrifuge tube - it is the highest near the rotor and lowest near the axis. the average is in the middle of the tube
how do you calculate the rpm
n = 945.7 (RCF/r)^1/2
OR
use a nomogram
what sediments first in a cell
whole cell
cell debris
nuclei
what sediments last in a cell
lysosomes
ribosomes
what are the applications of centrifugation
removal of precipitates
sedimentation of isolated cells
isolation of organelles - choosing force based on sedimentation rate - makes a pellet
what is a rate zonal density gradient
sample centrifuged and then the large particles move faster tan small ones - creates zones (bands)
what is an isopycnic density gradient
sample separates on the basis of buoyant densities
sucrose forms density gradient
bands within a density gradient can be sampled with a pipette or punctured tube