Cellular Energetics Flashcards

L5-L7, And photosynthesis

1
Q

1st Law of Thermodynamics

A

The total energy in the universe cannot be increased or reduced, energy can only be converted from one form to another

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2
Q

2nd law of thermodynamics

A

Every energy transfer increases the entropy/chaos in the universe by losing energy to the environment eg heat is lost from an engine

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3
Q

Cellular respiration

A

metabolic process with which an organism obtains energy by oxidising nutrients and releasing waste products

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4
Q

Metabolism

A

totality of an organisms chemical reactions

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5
Q

Anabolism

A

Use energy to build complex molecules

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6
Q

Catabolism

A

release energy through metabolic breakdown

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7
Q

Gibbs free energy

A

The portion of the systems energy that can perform work

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8
Q

Exergonic

A

A reaction which releases energy

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9
Q

Endergonic

A

A reaction which requires energy

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10
Q

Mitchells Chemiosmosis Theory

A

Chemical energy generated from electron transport across a transmembrane electrochemical gradient

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11
Q

^G = ^H-T^S

A

^: Delta
^G: Change in free energy
^H: Change in total energy
T: Temperature
^S: Entropy

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12
Q

For a reaction to happen spontaneously…

A

^G must be negative

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13
Q

Photosynthesis

A

A process in phototrophs in which inorganic atmospheric compounds (CO2 + H2O) are converted into high energy organic compounds (carbohydrates)

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14
Q

Describe chlorophyll pigments

A
  • Have 4 pyrolle groups which alternate between single and double bonds
  • Have a tetrapyrole ring
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15
Q

Purpose of single/double bonds in chlorophyll pigments

A
  • Pi electrons can be shared across via the electron cloud.
  • Single bonds: only absorb UV light
  • Sharing e- allows visible and infrared light to be absorbed
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16
Q

Antenna pigments

A

Extend the range of light a plant is able to capture, especially green light which chlorophyll struggles to absorb

17
Q

Photosynthetic reaction centres

A

Repeatedly pass on the light energy to other reaction centres until it is ready to use the light/it hold it long enough for biochemistry to take place

18
Q

Z Scheme

A

Path of electron flow and reduction potentials of the components in photosynthesis
- Thylakoid membrane

19
Q

P680 and P700 are

A

Poor reducing agents but are good reducing agents when excited

20
Q

Parts of ATP synthase

A

In membrane:
Anchor
Stator
In mitochondrial matrix:
Rotor
Head (6 (3&3) subunits of alpha and beta subunits)

21
Q

Describe ATP synthase

A
  • Brings ADP and phosphate together
  • Movement of protons through ATP synthase generates movement
  • Rotation of rotor causes small conformational changes between the 3 pairs of alpha and beta subunits. Causing synthesis of ATP
  • Pero rotation 3 ATP are synthesised
22
Q

Cyclic electron transport

A

Light energy harvested at photosystem I is used for ATP synthesis but not NADPH synthesis. Yields ATP but not NADPH

23
Q

How are dark reactions identified

A

Cuvette
Inject CO2
Pulse chase experimental approach
2D chromatography

24
Q

Describe the structure of RuBisCO

A
  • ribulose bisphosphate carboxylase
  • makes up 50% of soluble plant proteins
  • most abundant enzyme in nature
  • 8 large subunits (encoded by nuclear genome)
  • 8 small subunits (encoded by chloroplast genome)
  • 3.6 bill years old
25
Describe function of RuBisCO
- Carries out primary (and secondary) processes - Every 4 cycles fixes O2 to RuBP rather than CO2 - Has a 250x higher binding affinity for CO2 that O2
26
Consequences of fixing O2 to RuBP
2PGA and CO2 generated. 2PGA is toxic as it inhibits metabolic pathways Photorespiration breaks it down in CO2 which re-enters the calvin cycle.
27
How do cynobacteria deal with RuBisCOs limitations?
Express transport proteins to accumulate CO2 and HCO3- in carboxysomes which are semi-crystaline protein structures incorporating RuBisCO
28
Pyrenoids
Membrane-bound structures found in the chloroplast of some algae, which also concentrate CO2
28
Which types of photosynthesis is the most productive?
1. C4 2. CAM 3. C3
29
Which type of photosynthesis requires the least water?
1. CAM 2. C4 3. C3
30
Photosystems?
Large complexes of proteins and pigments that are optimised to harvest light. (Z scheme)
31
Purpose of Z scheme
Produces H+ ions which fuel ATP synthase; produces ATP and NADPH which go into the Calvin Cycle
32
Photorespiration
The process of converting 2PGA into CO2. But it's energy inefficient and uses already-fixed carbon