Cell Signaling (I & II) Flashcards

1
Q

What are the two general types of signal receptors?

A

Cell-surface receptors and intracellular receptors

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2
Q

Describe the structural differences between extracellular and intracellular signaling molecules

A

Extracellular signaling molecules are large, hydrophilic signals that cannot enter the cell.
Intracellular signaling molecules are small hydrophobic molecules that can pass through the lipid membrane and often into the nucleus

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3
Q

What are the different ways that cells can transmit signals?

A

Contact-dependent: cells must physically touch
Paracrine: cells release signal that acts locally
Autocrine: cell releases signal that act on itself
Synaptic: neurotransmitter released into synapse
Endocrine: hormone released into bloodstream, travels to target tissue

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4
Q

What determines the specificity of endocrine signaling?

A

The receptors expressed on target cell surfaces dictate which hormones are “pulled out” of the blood stream

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5
Q

How do survival signals differ from those leading to growth/division, differentiation, and apoptosis?

A

Different combinations of signals lead to all of these events
Signals in addition to the basic survival signal are required for growth/division, and different signals lead to differentiation
The absence of survival signals leads to apoptosis

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6
Q

How can one hormone induce numerous different responses in the body?

A

Hormones can have different types of receptors in different tissues
-Example: acetylcholine causes skeletal muscle contraction by acting on ion channels, decreases heart rate by acting on muscarinic M2 receptors in the heart, and lead to salivary gland secretion by binding to muscarinic M3 receptors

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7
Q

Describe the primary response following steroid hormones binding to their receptors

A

Primary response genes are activated by receptor-steroid-hormone complexes
Primary response proteins can feed back to downregulate primary response OR they can trigger secondary response by activating additional genes

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8
Q

Describe the structure of nuclear receptor superfamily proteins

A

All have a DNA binding domain, C-terminal that binds hormone, and an N terminal that interacts with regulator proteins

  • Inhibitory proteins can block the ligand binding domain
  • When hormone is bound, protein is activated, can interact with coactivator proteins and cause transcription of target genes
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9
Q

What are the major classes of cell-surface receptors?

A

Ion channel coupled receptors
Enzyme coupled receptors
G-protein coupled receptors

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10
Q

Describe the activation of enzyme coupled receptors

A

1) Signal dimer brings 2 inactive receptor monomers together and activates them
2) Enzyme is activated, phosphorylate each other and then other proteins

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11
Q

True or false: The enzyme activity of G-protein coupled receptors is regulated by phosphorylation

A

False

G-protein coupled receptors have no enzyme activity on their own

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12
Q

Describe the structure of a GPCR

A

7-transmembrane receptors with a N-terminal receptor region in the extracellular space, and a C-terminal cytosolic tail

3 intracellular loops are sites for phosphoylation

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13
Q

Where on the GPCR do hormones bind?

A

They bind to the N-terminal tail and extracellular loops

Small ligands bind deep within the plane of the membrane

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14
Q

Describe the structure of the G-protein

A

Made up of 3 subunits: α, β and γ
α is bound to GDP in inactive form, GTP when active
α and γ have transmembrane lipid tails
β and γ are tightly bound, act as a single functional unit

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15
Q

How are G-proteins activated?

A

When an extracellular signal binds to a GPCR, there is a conformational change that binds the G-protein and triggers the α subunit to break from GDP and pick up GTP. With GTP bound, the α subunit can dissociate from the βγ complex and each can transmit separate signals

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16
Q

When are G-protein target proteins active?

A

For as long as the α subunit is associated with it

The α subunit only associates with target proteins with GTP bound

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17
Q

How is the α subunit deactivated?

A

The α subunit has GTPase activity that is activated by target proteins causing the α subunit to turn itself off by hydrolyzing GTP

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18
Q

What are the 3 major G-protein types discussed in class and what are their functions?

A

Gs: activates adenylyl cyclase
Gi: inhibits adenylyl cyclase
Gq: activates phospholipase C-β

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19
Q

How is cAMP formed and degraded?

A

cAMP is synthesized from ATP by adenylyl cyclase resulting in the loss of a pyrophosphate
cAMP is degraded by cAMP phosphodiesterase, which produces 5’-AMP

20
Q

What protein does cAMP activate?

A

Protein Kinase A

21
Q

Describe how cAMP activates PKA

A

PKA exists in an inactive state bound to a regulatory subunit.
When cAMP binds, PKA dissociates from the regulatory subunits and is activated

22
Q

What amino acid sequence does PKA target for phosphorylation?

A

-N-N-X-S-Y-
Where X is any amino acid, and Y is a hydrophobic amino acid
S will be phosphorylated

23
Q

How does PKA regulate gene transcription?

A

activated PKA can enter the nucleus and activate CREB (cAMP response element binding protein) by phosphorylation
CREB than interacts with CREB binding protein to activate gene transcription

24
Q

How is the GPCR desensitized?

A

Activated GPCR stimulates GPCR Kinase (GRK) to phosphorylate the receptor on multiple sites
-Phosphorylated GPCR can bind to Arrestin, which blocks activation and directs GPCR endocytosis

25
Q

Describe the mechanism of cholera toxin

A

Cholera toxin causes ADP-ribosylation of the Gαs subunit which inhibits the GTPase activity. This causes Gαs to be continuously active, which increases cAMP, PKA and causes activation of the CFTR chloride channel
End result: diarrhea, dehydration

26
Q

How is PI(4,5)P2 formed?

A

It is synthesized by 2 rounds of phosphorylation of phosphatidylinositol (PI) on the inner leaflet of the cell membrane

27
Q

What does phospholipase C-β do?

A

It cleaves PIP2 to produce membrane bound diacylglycerol and inositol 1,4,5-triphosphate (IP3)

28
Q

What are the effects of diacylglycerol and IP3?

A

Diacyl glycerol activates Protein kinase C

IP3 causes calcium release from the endoplasmic reticulum

29
Q

How is phospholipase C-β activated?

A

An active Gq protein alpha subunit (GTP bound) can activate PLC-β

30
Q

How is low cytosolic calcium concentration maintained?

A

Active transport by a sodium/calcium antiporter, a P-type calcium pump on the plasma membrane, a P-type calcium pump on the ER membrane, calcium binding molecules, and a proton/Ca symporter on the mitochondria

31
Q

How does IP3 trigger calcium release?

A

IP3 binds to calcium channels on the ER and plasma membrane to induce calcium entry into the cytosol

32
Q

How does the concentration of vasopressin impact calcium release?

A

Increased concentrations of vasopressin cause more frequent bursts of calcium release (spikes still at SAME MAGNITUDE)

33
Q

What is calmodulin?

A

A dumb-bell shaped regulatory protein that is activated by calcium binding
It can bind to proteins to increase/decrease protein activity

34
Q

How is CaM-kinase II activity regulated?

A

“Ca2+-calmodulin dependent protein kinase”

1) CaM-kinase II binds to itself in inactive form
2) Calmodulin/Ca2+ partially activates CaM-kinase II
3) CaM-kinase II then phosphorylates itself leading to full activation
4) When calcium levels return to basal levels, calmodulin dissociates from CaM-kinase II
5) CaM-kinase II retains activity after signal is gone
6) Phosphatase can inactivate by dephosphorylating

35
Q

How does CaM-kinase II decode calcium oscillations?

A

Low frequency Ca2+ oscillations hardly generate a signal because the autophosphorylation doesnt maintain enzyme activity long enough

High frequency Ca2+ oscillations prevent the enzyme from completely inactivating, which leads to increasing CaM-kinase activity with time
*Phosphorylated CaM-kinase has higher affinity for calmodulin

36
Q

List the three subtypes of adrenergic receptors

A

α1, α2 and β

37
Q

What are the GPCR subtypes associated with each class of andrenergic receptors?

A

α1: α1A, α1B and α1D
α2: α2A, α2B and α2C
β: β1, β2 and β3

38
Q

Which G-protein do each class of adrenergic receptors principally interact with?

A

α1: Gq proteins
α2: Gi and Go proteins
β: Gs proteins

39
Q

If epinephrine is used as a drug, which adrenergic receptors will it bind to?

A

All of them
This can cause many different things to happen in the body
Usually only used as drugs in emergent situations

40
Q

Which adrenergic subtype will an α1 agonist bind to and what will it cause?

A

It will bind to and activate α1 receptors, but have no effect on α2 and β receptors

41
Q

Which adrenergic subtype will an β antagonist bind to and what will it cause?

A

It will bind to β receptors and block endogenous epinephrine from binding, but will not impact α1 and α2

42
Q

How is Nitric oxide synthesized in cells?

A

Nitric oxide synthase (NOS) catalyzes the synthesis
Breaks down L-Arginine, with the use of NADPH as a cofactor and O2.
Produces NO and L-citruline
NOS is activated by Ca2+-calmodulin

43
Q

What effect does NO have?

A

It binds to the heme group of guanylyl cyclase to increase the concentration of cGMP, which increases activity of protein kinase G

44
Q

Describe the signaling pathway activated by bradykinin

A

Bradykinin binds to a GPCR that activates Gq, and thus PLC
PLC produces IP3, which causes a release of Ca2+
Ca2+ binds to calmodulin
Ca/CM activates NOS, which produces NO
NO diffuses out of endothelia and into smooth muscle
NO increase cGMP, which activates PKG
PKG phosphorylates proteins that induce muscle relaxation, vasodilation

45
Q

True or false: normal NO production is endothelium dependent

A

True

NO is produced in the endothelia, but acts outside the endothelia

46
Q

How are nitrates used as vasodilators?

A

They are digested by enzymes into NO

Bypass the endothelium and act straight on smooth muscle to produce cGMP, leading to muscle relaxation