Cell respiration Flashcards

1
Q

Where does cellular respiration take place?

A
  • The cytoplasm (glycolysis) and mitochondria (synthesis of usable energy ATP)
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2
Q

What type of reaction transfers chemical energy in the breakdown of organic molecules?

A
  • Redox reactions, one compound is oxidized and the other reduced
  • Oxidation: gaining oxygen, loss of electrons, loss of hydrogen, loss of potential energy
  • Reduction: losing oxygen, gain of electrons, gain of hydrogen, gain or potential energy
  • When electrons are gained or lost, the electrons become carriers of energy
  • OIL RIG
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3
Q

What happens during a redox reaction?

A
  • In the oxidation step, the electrons that are lost are used in other parts of the cell. They are transported to a mitochondria where they are used in the electron transport chain to generate ATP
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4
Q

What is phosphorylation?

A
  • Process that occurs in photosynthesis and cellular respiration. Two types: substrate and oxidative
  • A phosphate group is added which makes molecules less stable and hence ATP is a reactive molecule that contains high energy bonds (lots of energy —> unstable), more likely to react
  • When ATP undergoes hydrolysis to form ADP + Pi, the energy stored in the phosphate bond is released for use by the cell (more stable)
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5
Q

What are two functions of ATP? What energy is used for ATP production?

A
  • It releases energy when hydrolysed to ADP (powers metabolism)
  • It transfers the released phosphate group to other organic molecules making them less stable and more reactive
  • To form ATP, either solar energy of energy from oxidative process is used
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6
Q

What steps are required in the breakdown of organic molecules?

A
  • The energy requirements are reduced as the activation energy is divided across several steps
  • The released energy is transferred to activated carrier molecules by redox reactions
    Check book
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7
Q

What are carrier molecules? What are the two important electron carriers?

A
  • Carrier molecules are called hydrogen carriers or electron carriers as they gain electrons and protons (H+)
  • Energy stored in the organic molecule is transported by protons and electrons to the carrier molecules
  • NAD+ is a electron carrier which is reduced to form NADH
    (NAD+ + 2H+ + 2e– → NADH + H+)
  • FAD is a electron carrier which is reduced to form FADH2
    (FAD + 2H+ + 2e– → FADH2)
  • The reduced electron carriers (NADH + H+) are transferred to mitochondria where they are used in the electron transport chain to generate ATP
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8
Q

How does the energy transfer involving carrier molecules work?

A
  • Energy that is released by oxidation reactions, is transported by reduced carrier molecules (NADH) to the cristae of the mitochondria
  • The carrier molecules act as taxis
  • Cristae: site of the electron transport chain, this chain uses the energy transported by the carriers to synthesize ATP
  • The synthesize of ATP, requires oxygen to work so only aerobic respiration can generate ATP from hydrogen/electron carriers
    Check book
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9
Q

What is the purpose of glycolysis, the link reaction and krebs cycle?

A
  • They must produce a high concentration gradient of protons (H+) so that ATP synthase uses them to generate a lot of ATP
  • The generating occurs in the electron transport chain (chemiosmosis)
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10
Q

What is glycolysis?

A
  • First step in the breakdown of carbohydrates a.k.a cellular respiration
  • Glycolysis occurs in the cytosol (cytoplasm) of the cell
  • It is an anaerobic process (no oxygen needed) and results in a small net gain of ATP (2 molecules)
  • Glucose broken down into two pyruvate molecules
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11
Q

Explain the first two steps of gylcolysis.

A
  1. Phosphorylation: Glucose is phosphorylated (add a phosphate group) by two molecules of ATP to from hexose biphosphate which makes glucose less stable and more reactive
  2. Lysis: The hexose biphosphate (C6) is split into two triose phosphates (C3)
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12
Q

Explain the last three steps of glycolysis.

A
  1. Oxidation: Through oxidation, hydrogen is removed from each C3 to reduce NAD+ to NADH + H+. Two molecules of NADH is produced (one from each C3)
  2. ATP formation: the energy released from the sugar is used to directly synthesise ATP which is called substrate level phosphorylation. 4 molecules of ATP are generated (2 per C3 sugar)
  3. Glucose has been broken down into two pyruvates and two hydrogen carriers have been reduced by oxidation. 4 ATP molecules are produced and 2 are used
    - Most potential energy from glucose is now kept in the 2 pyruvates
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13
Q

What happens when the availability of oxygen varies after glycolysis?

A
  • When oxygen is available the pyruvate undergoes aerobic respiration and a further production of ATP (34 molecules)
  • When oxygen is not available the pyruvate undergoes anaerobic respiration (fermentation) and no further ATP produced
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14
Q

What happens in aerobic respiration after glycolysis?

A
  • Pyruvate is transported to the mitochondria for further breakdown, oxidation is completed
  • A lot of hydrogen carriers are reduced resulting in: NADH + H+ and FADH2
  • The reduced hydrogen carriers release their stored energy to synthesis more ATP
  • After this these processes follow: link reaction, krebs cycle and electron transport chain
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15
Q

What happens in anaerobic respiration after glycolysis?

A
  • Pyruvate is not broken down further and no more ATP is produced, oxidation is not completed. The pyruvate remains in the cytosol and is converted into lactic acid in animals or ethanol and CO2 in plants and yeast
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16
Q

Why does anaerobic respiration allow small amounts of ATP to be produced?

A
  • The fermentation of these products is reversible, to ensure that glycolysis continues to produce small quantities of ATP
  • Through oxidation the reduced hydrogen carrier (NADH) is oxidised to NAD+ to restore available stocks of NAD+
  • When oxygen is absent, gylcolysis will run out of available stocks of NAD+ which prevents glycolysis from occurring
  • When pyruvate is fermented the NADH is oxidised which releases NAD+ to restore available stocks
  • In the absence of oxygen, only small amounts of ATP are produced
17
Q

Explain the link reaction that happens after glycolysis in aerobic respiration.

A
  • The products of glycolysis are linked with the aerobic process of the mitochondria
  • Link reaction: transport of pyruvate from the cytosol into the mitochondrial matrix by carrier proteins on the membrane of the mitochondria
  • The pyruvate loses a carbon atom (decarboxylation) which forms CO2. The remaining C2 compound forms an acetyl group when it loses hydrogen atoms through oxidation (reduction of NAD+)
  • The acetyl compound combines with coenzyme A to form acetyl CoA
  • The O2 present further oxidises the sugar molecule for a greater yield of ATP, link reaction occurs on both pyruvate molecules
18
Q

What are the products of the link reaction?

A
  • Per glucose molecule: 2x acetyl CoA, 2x NADH + H+ and 2x CO2
19
Q

Explain the 4 steps of the krebs cycle.

A
  • Occurs in the mitochondrial matrix
    1. Acetyl CoA breaks up, the CoA goes back to the link reaction to pick up more acetyl for the krebs cycle. Acetyl (2C) bonds with a 4C to form a 6C
    2. 6C undergoes decarboxylation and loses CO2 (oxidised). Oxidation occurs and the hydrogen carrier are reduced (NAD+ to NADH + H+). A 5C is left
    3. The 5C is decarboxylised which results in another CO2. Oxidation occurs to reduce NAD+ again. Result is a 4C molecule
    4. No more decarboxylation needed. NAD+ and FAD undergo reduction again. End product is the original 4C compound which will react with acetyl again as the cycle repeats. 4 ATP molecules are produced in one cycle
20
Q

What are the products of the krebs cycle after one and two cycles?

A

One cycle:
2x CO2, ATP, FADH2, 3x NADH + H+
Two cycles:
4x CO2, 2x ATP, 2x FADH2, 6x NADH + H+
- The krebs cycle occurs twice as the link reaction produces 2 acetyl CoA
- Only 4 ATP are produced, however due to the hydrogen carriers more ATP is produced during the cycle
- Maximum yield of one glucose is 38 molecules of ATP

21
Q

Explain the electron transport chain.

A
  • Located in the inner mitochondrial membrane i.m.m of the cristae
    1. Hydrogen carriers (NADH and FADH2) are oxidised and donate the electrons, which they are transporting, to protein complexes in the i.m.m
    2. H+ (protons) are left. The protein complexes pass the donated electrons down a chain to other proteins
    3. When the electrons passed on, the H+ are pumped by the proteins from the mitochondrial matrix into the inner mitochondrial space. This increases H+ concentrations
    4. The passing along the electrons provides energy for electron carriers to pump the H+ into the i.m.m. When the final protein in the chain is reached, the electron concentration increases and electron transport chain stops
    5. Oxygen accepts electrons from the last protein and combines the electrons with the H+ to form H2O. Oxygen is the final electron acceptor to reduce electron concentration and keep the chain going
22
Q

What is chemiosmosis?

A
  • Concentration of H+ is increased by reducing hydrogen carriers as they release a H+ to create a concentration gradient
  • ATP synthase (protein) uses the H+ concentration gradient to received H+. Diffusion of H+ through ATP synthase triggers oxidation phosphorylation, adds a phosphate group to ADP to produce ATP.
  • This process results in 34 ATP molecules
  • O2 (reduced) will removes electrons to prevent the chain from blocking. O2 binds to H+ to form H2O. This reduces the electron and hydrogen concentration and creates a concentration gradient so H+ will diffuse into the ATP synthase to generate ATP.
23
Q

What is oxidative phosphorylation?

A
  • Involves electron transport chain and chemiosmosis
  • Hydrogen carriers donate electrons to the electron transport chain, as the electrons move through the chain they lose energy, which is transferred to the electron carriers within the chain
  • The electron carriers use this energy to pump hydrogen ions from the matrix and into the intermembrane space, creates H+ concentration gradient
  • H+ ions return to the matrix via diffusion through ATP synthase (chemiosmosis)
  • As the ions pass through ATP synthase they trigger a phosphorylation reaction which produces ATP (from ADP + Pi) phosphate group added
  • Oxygen accepts electrons from the chain and binds them to H+ to form water to maintain the hydrogen gradient by removing H+ ions from the matrix
24
Q

What are the function and structure of the mitochondria?

A
  • Function: to synthesis large amounts of ATP via aerobic respiration, the cell membrane is used to perform oxidative phosphorylation
    Structure:
  • Double membrane structure
  • Contain own DNA and ribosomes (70s)
  • Their metabolic processes are easily effected by some antibiotics
25
Q

How are the 7 structures of the mitochondria adapted to their function?

A
  • Outer membrane: contains transport proteins that enable pyruvate to move between the cytosol and the membrane, allows optimum conditions for aerobic r.
  • Inner membrane: contains the electron transport chain and ATP synthase which are used for oxidative phosphorylation
  • Cristae: inner membrane is folded to increase SA:V ratio, affects ETC and ATP synthase in their ATP production
  • Intermembrane space: small space between the membranes to optimize hydrogen concentration gradient
  • Matrix: contains enzymes and a suitable pH for the Krebs cycle
  • 70S ribosomes: synthesis proteins and enzymes for the mitochondria
  • DNA: codes for proteins
    Check book
26
Q

What structures can be seen in an electron micrograph image of the mitochondria?

A
  • Sausage-shaped
  • Inner membrane will contain many cristae (folding)
  • Intermembrane space is very small
  • Ribosomes and DNA are not visible
27
Q

What is electron tomography?

A
  • 3D internal structures of a sample are modelled
  • The image is titled to different angles. Snap shots are taken to put construct a 3D image
  • Electron tomography shows these features of active mitochondria: the cristae are continuous with the internal mitochondrial membrane, intermembrane space has a consistent width, shape and volume of cristae is changed in active mitochondria