Cell organelles Flashcards

1
Q

What is one theory on how the membrane developed?

A

The DNA was stuck to the cell membrane. Eventually, the membrane invaginated and form a vesicle. Extra membrane layering may have been a primative ER.

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2
Q

What are the evolutionary benefits of having membrane bound organelles (4)?

A
  1. Surface area
  2. Directed protein flow
  3. Compartmentalization
  4. cell waste breakdown
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3
Q

How much membrane is cell membrane vs organelle membrane?

A

2 to 98%

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4
Q

How much of the cell is cytosol vs membrane bound?

A

50/50

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5
Q

What are the two classifications of organelles?

A

Membrane- golgi, ER, mitochondria, lysosome, perioxosomes, vesicles

Macromolecular- ribosomes, proteosomes

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6
Q

Where are mitochondria found in the cell?

A

Often found in areas with the highest energy demands. They are often associated with MTs

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7
Q

Describe how mitochondria make energy.

A

The CAC occurs inside the matrix and takes Acetyl-CoA from cytosol and turns it into CO2 and the energy carriers FADH2 and NADH. NADH and FADH2 go to the intracellular membrane where they donate electrons to a series of 3 protein complexes, which pump H from the matrix into the intramembrane space (against the diffusion gradient). As the H ions return to the matrix, they pass the membrane through ATP synthase, spinning it. ATP synthase turns the kinetic energy provided by the H into ATP. It can produce as much as 100 ATP/sec.

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8
Q

What is unique about mitochondria as an organelle?

A

It contains its own DNA/ribosomes/ribosomal proteins. The copies of DNA vary widely and are inherited maternally. Most malfunctions of mitochondria occur b/c of a problem with mtDNA.

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9
Q

What is MERRF?

A

ragged red fibers- occurs b/c of mtDNA mutation to tRNA lysine.

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10
Q

Describe the composition of ribosomes.

A

Two subunits, one large and one small, each made up of a combination of protein and rRNA. The large catalyzes the new peptide bonds whereas the small is the framework for the mRNA.

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11
Q

Describe how translation occurs.

A

Ribosomes have 4 bindings spots- 1 for mRNA and 3 for peptides (A,P,E). mRNA in the A site has codon “read” and matched with appropriate tRNA. P spot AA has its carboxyl end bound to amino end of new A spot AA. Large subunit translocates relative to small, moving the two AA into the E and P spots. Small subunit translates 3 bases. tRNA in E slot is removed and new tRNA enters the A spot.

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12
Q

In what direction is mRNA translated?

A

5’ to 3’

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13
Q

In what direction are AA read?

A

N terminal to C terminal

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14
Q

How is where a protein is made related to where it will eventually go?

A

Membrane bound proteins or proteins that will be exocytosed are made in ribosomes associated with the rER. Cytosolic proteins are made by free ribosomes.

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15
Q

What are polyribosomes?

A

Found both in free and membrane ribosomes, they are a collection of ribosomes working on the same mRNA.

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16
Q

What is the importance of the difference between eukaryotic and prokaryotic ribosomes?

A

Prokarytoic subunits are smaller, and because they are different from eukaryotic ribosomes, they can be selectively targeted therapeutically.

17
Q

What are chaperone proteins?

A

They assist in the folding of new proteins.

18
Q

What are proteasomes?

A

They degrade damaged or incorrectly folded proteins tagged with ubiquitin.

19
Q

What is the significance of ubiquitin?

A

Ubiquitin marks things for destruction by proteasomes. The proteasome cap recognizes the ubiquitin, and ATP is used to denature the protein and draw it into the proteasomes active site.

20
Q

Where does the ER originate?

A

Its lumen is continuous with that of the nuclear envelope

21
Q

What are the purposes of the smooth and rough ERs?

A

Smooth ER
synthesize phosphlipids, glycolipids, cholesterol (steroids and lipids)
break down cytochrome p450
Ca sequestration

Rough ER
protein sorting and synthesis

22
Q

How do the contents of the ER move throughout it?

A

Diffusion and vesicle transport.

23
Q

What are the defining features of the Golgi?

A

Cis (close to nucleus) and trans (away from nucleus) face

24
Q

What are the three ways out of the golgi?

A

Receptor mediated secretory vesicle transport
Recemptor mediated endosome/lysosme
Constitutive vesicle release

25
Q

What are peroxisomes?

A

Oxidize substrates- forms h202 and breaks it down
beta oxidation of fatty acids
abundant in liver and kidneys
important for myelin sheath formation and ethanol breakdown

26
Q

Why did organelles develop?

A

It was necessary to increase the surface area of membrane relative to the overall size of the cell