Cell Cycle Regulation Flashcards

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1
Q

Where are the checkpoints in the cell cycle?

A
  • R point during G1
  • G1/S
  • G2/M
  • Metaphase/ Anaphase checkpoint
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2
Q

What is a cyclin?

A

Cyclin is a family of proteins that control the progression of cells through the cell cycle by activating cyclin-dependent kinase (CDK) enzymes.
- Cdk regulator

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3
Q

What is Cdk?

A

Cyclin-dependent kinase

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4
Q

What cyclin and Cdk partner is present in the growth phase?

A

cyclin D- Cdk 4 and Cdk6

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5
Q

What cyclin and Cdk partner is present in the G1 to S transition?

A

cyclin E- Cdk 2

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6
Q

What cyclin and Cdk partner is present in the S phase?

A

cyclin A- Cdk 2, Cdk1

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7
Q

What cyclin and Cdk partner is present during mitosis?

A

cyclin B- Cdk1

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8
Q

How do you activate Cdk2?

A
  1. Cdk has a T loop structure in its inactive form that blocks the active site keeping it inactive
  2. When cyclin is present, it binds to Cdk, changes the conformation of the T-loop and exposes the active site
    - this enables ATP to bind
    - becomes partially active
  3. Cdk activator kinase phosphorylates the t-loop area
    - this fuly activates Cdk
    - now can fully bind to its substrate
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9
Q

When does mitogen-independent late G1 growth start?

A
  • After mitogen-dependent early G1
  • when cell goes past the point of no return
  • hyperphosphorylation and inactivation of the retinoblastoma tumour suppressor protein (pRb)
  • stimulating signals cyclin E & Cdk2
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10
Q

What is the Rb/E2F pathway in cell cycle regulation?

A
  • happens during the R point
    1. Rb protein is phosphorylated to a low level - dependent on cdk 4 and 6 and cyclin B
  • prevents activation of transcription factors E2F and DP
    2. Once passes R point, another Cdk cyclin kicks in
  • Cdk 2 becomes activated when bound to cyclin E
  • Once complex comes in, this further phosphorylates Rb
    3. Hyper phosphorylation of Rb occurs
  • Rb becomes inactivated
  • Transcription factors E2F/DP can be activated
  • Turns on transcription of the genes required for the S phase
  • Further activation of cyclin E to move the cell cycle forward
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11
Q

What happens during the G1/S cell cycle check point?

A
  • DNA integrity needs to be checked before DNA replication
  • controlled by CDK2 and cyclin A
  • p53 pathway
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12
Q

What happens during the p53 pathway?

A
  • double and single stranded DNA break
  • Once p53 is activated, it acts on p21 (a Cdk inhibitor)
  • Regulates cycle by controlling the cyclin/cdk complexes such as the Cyclin E/Cdk2 complex
  • Can either inhibit the complex, therefore G1 arrest occurs as pRB will inhibit the transcription factors
  • Or will allow the complex to form, thereby hyper phosphorylating Rb and letting the pathway lead to DNA synthesis
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13
Q

What inhibits p53/ promotes p53 degradation?

A

MDM2

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14
Q

What happens during the G2/M cell cycle check point?

A
  • assess DNA integrity
  • controlled by Cdk1 and Cyclin B
  • p53 pathway
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15
Q

Which proteins remove and add inhibitory phosphates to Cdk?

A
Cdc25a:
- phosphatase
- removes inhibitory phosphates from Cdk2
Wee1:
- kinase
- adds inhibitory phosphate onto Cdk1
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16
Q

What happens during the checkpoint in the Metaphase/Anaphase transition?

A
  • spindle assembly checkpoint

- to ensure accurate DNA segregation

17
Q

How are cyclins degraded?

A

Ubiquitin is added to the protein which is due to be degraded

  • done by cyclosome (also known as the anaphase-promoting complex)
  • E3 Ubiquitin protein ligase
  • This is done to cyclins so they can be recycled through the cell cycle
  • Polyubiquitin chain binds to the cyclin, acting as a label to what needs to be degraded
18
Q

How does the degradation of proteins through cyclosome promote anaphase?

A
  1. Target for cyclosome is securin
    - the ubiquitylation and degradation of securin leaves an active separase
  2. The activated separase cleaves the cohesive between sister chromatids to separate the chromatids
  3. Activates anaphase initiation
    - can also bind to Cdh1 to make sure it is ready
19
Q

What are the ways to slow down/ pause the cell cycle?

A
  • degradation of cyclins (e.g. cyclosome)
  • inhibit Cdks by modifying their phosphorylation sites
  • Cdk inhibitor proteins (CKIs)
20
Q

What are oncogenes and name some.

A
  • the lack of inhibition or over-expression of function will lead to cancer
  • e.g. cyclins, CDKs, MDM2
21
Q

What are tumour suppresors and name some?

A
  • the increased inhibition of loss of function will lead to cancer
  • e.g. p53, RB, BRCA1, BRCA2