BRS Biochemistry Clinical Correlates Questions Semester 1 Flashcards

1
Q

Interference in generalized cytokine signaling can lead to which one of the following disorders?

(A) Adrenoleukodystrophy

(B) SCID

(C) Influenza

(D) Myasthenia gravis

(E) Type 1 diabetes

A

The answer is B.

X-linked SCID is due to the lack of a common cytokine receptor subunit (the γ subunit), which affects the ability of a variety of cytokines to transmit signals to hematopoietic cells. Adrenoleukodystrophy is due to the buildup of very long-chain fatty acids, for a variety of reasons. Influenza is due to a virus. Myasthenia gravis is due to the production of autoantibodies directed against the acetylcholine receptor. Type 1 diabetes results from an inability to produce insulin

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2
Q

Questions 118 to 121 are matching questions. A dietary deficiency of a vitamin can cause each of the conditions below. Match each condition with the appropriate vitamin. An answer may be used once, more than once, or not at all.

  1. Pellagra

(A) Vitamin C

(B) Niacin

(C) Vitamin D

(D) Biotin

(E) Thiamine

A

118 The answer is B. Pellagra is due to a dietary deficiency of niacin, beriberi is due to a lack of thiamine (vitamin B1), scurvy due to a lack of vitamin C, and rickets from a lack of vitamin D

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3
Q

A young woman (5’ 3” tall, 1.6 m) who has a sedentary job and does not exercise consulted a physician about her weight, which was 110 lb (50 kg). A dietary history indicates that she eats approximately 100 g of carbohydrate, 20 g of protein, and 40 g of fat daily.

What is this woman’s BMI?

(A) 16.5

(B) 17.5

(C) 18.5

(D) 19.5

(E) 20.5

A

The answer is D.

The BMI is calculated by dividing the weight of the individual (in kilograms) by the square of the height of the individual (in meters). For this woman, BMI 5 50/1.62 5 19.5

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4
Q

A 3-year-old girl has been a fussy eater since being weaned, particularly when fruit is part of her diet. She would get cranky, sweat, and display dizziness, and lethargy, after eating a meal with fruit. Her mother noticed this correlation, and as long as fruit was withdrawn from her diet the child did not display such symptoms. The problems the girl exhibits when eating fruit is most likely due to which one of the following?

(A) Decreased levels of fructose in the blood

(B) Elevated levels of glyceraldehyde in liver cells

(C) High levels of sucrose in the stool

(D) Elevated levels of fructose-1-phosphate in liver cells

(E) Decreased levels of fructose in the urine

A

The answer is D.

The patient has HFI, which is due to a mutation in aldolase B. Sucrose would still be cleaved by sucrase, thus it would not increase in the stool. Fructose would not be metabolized normally, therefore it would be elevated in the blood and urine. Aldolase B would not cleave fructose 1-phosphate, thus its levels would be elevated and the product, glyceraldehyde, would not be produced

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5
Q

A young woman (5’ 3” tall, 1.6 m) who has a sedentary job and does not exercise consulted a physician about her weight, which was 110 lb (50 kg). A dietary history indicates that she eats approximately 100 g of carbohydrate, 20 g of protein, and 40 g of fat daily.

What is the woman’s approximate DEE in calories (kilocalories) per day at this weight?

(A) 1,200

(B) 1,560

(C) 1,800

(D) 2,640

(E) 3,432

A

The answer is B.

This woman’s DEE is 1,560 calories (kcal). DEE equals BMR plus physical activity. Her weight is 110 lb/2.2 = 50 kg. Her BMR (about 24 kcal/kg) is 50 kg X 24 = 1,200 kcal/day. She is sedentary and needs only 360 additional kcal (30% of her BMR) to support her physical activity. Therefore, she needs 1,200 + 360 = 1,560 kcal each day.

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6
Q

Consider the section of the TCA cycle in which isocitrate is converted to fumarate. This segment of the TCA cycle can be best described by which one of the following?

(A) These reactions yield 5 moles of highenergy phosphate bonds per mole of isocitrate.

(B) These reactions require a coenzyme synthesized in the human from niacin (nicotinamide).

(C) These reactions are catalyzed by enzymes located solely in the mitochondrial membrane.

(D) These reactions produce 1 mole of CO2 for every mole of isocitrate oxidized.

(E) These reactions require GTP to drive one of the reactions.

A

The answer is B.

In the conversion of isocitrate to fumarate, 2 CO2, 2 NADH (which contains niacin), 1 GTP, and 1 FADH2 are produced. A total of approximately 7.5 ATP are generated. The enzymes for these reactions are all located in the mitochondrial matrix except succinate dehydrogenase, which is an inner mitochondrial membrane protein. GTP is not required in any of the reactions but is produced in the conversion of succinyl-CoA to succinate

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7
Q

Pyridoxine deficiency

(A) Megaloblastic anemia

(B) Hypochromic, microcytic anemia

(C) Hemolytic anemia

(D) Sickle cell anemia

A

The answer is B.

Pyridoxine is required for the formation of pyridoxal phosphate, the cofactor for the first reaction in heme formation. The lack of heme means that the red cells cannot carry as much oxygen (which gives them the pale color). The cells are small in order to maximize the concentration of hemoglobin present in the cells. A megaloblastic anemia is due to deficiencies in either vitamin B12 or folic acid (a lack of intrinsic factor will lead to a B12 deficiency named pernicious anemia). These cells are large because the vitamin deficiency interferes with DNA synthesis, and the cells double in size without being able to replicate their DNA. Once the anemia begins, the large blast cells are released by the marrow in an attempt to control the anemia. Hemolytic anemia occurs when the red cell membrane fragments, which can occur with pyruvate kinase deficiencies or a lack of glucose-6-phosphate dehydrogenase activity (which results in reduced NADPH levels). Sickle cell anemia is caused by a point mutation in the β-globin gene, substituting a valine for a glutamic acid

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8
Q

Match 115.

  1. Ehlers-Danlos syndrome
  2. Parkinson’s disease
  3. Tay-Sachs disease
  4. McArdle’s disease
  5. Maple syrup urine disease

(A) Glycogen

(B) Collagen

(C) Dopamine

(D) Valine

(E) A sphingolipid

A

The answer is E. Because a hexosaminidase is deficient in Tay-Sachs disease, partially degraded sphingolipids (gangliosides) accumulate in lysosomes. A defect in the synthesis or processing of collagen will lead to a variety of diseases, of which Ehlers-Danlos syndrome is one (osteogenesis imperfecta is another). Parkinson’s disease is due to low levels of dopamine in the nervous system. In the initial stages of Parkinson’s disease, giving DOPA can reduce the severity of the symptoms, as DOPA can be decarboxylated to form dopamine. DOPA can easily enter the brain, whereas dopamine cannot. McArdle’s disease is due to a defective muscle glycogen phosphorylase, such that the muscle cannot generate glucose from glycogen, leading to exercise intolerance. Maple syrup urine disease is due to the lack of branched-chain α-keto acid dehydrogenase activity, a necessary step in the metabolism of the branched-chain amino acids (leucine, isoleucine, and valine).

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9
Q

Which one of the following is a common metabolic feature of patients with anorexia nervosa, untreated type 1 DM, hyperthyroidism, and nontropical sprue?

(A) A high BMR

(B) Elevated insulin levels in the blood

(C) Loss of weight

(D) Malabsorption of nutrients

(E) Low levels of ketone bodies in the blood

A

The answer is C. All of these patients will lose weight—the anorexic patients because of insufficient calories in the diet, the patients with type 1 DM because of low insulin levels that result in the excretion of glucose and ketone bodies in the urine, those with hyperthyroidism because of an increased BMR, and those with nontropical sprue because of decreased absorption of food from the gut. The untreated diabetic patients will have high ketone levels because of low insulin. Ketone levels may be elevated in anorexia and also in sprue, due to a reduction in levels of gluconeogenic precursors. An increased BMR would be observed only in hyperthyroidism. Nutrient malabsorption would occur only in nontropical sprue and anorexia.

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10
Q

A 23-year-old male presents to the ER with a fracture of his humerus, sustained in what appeared to be a minor fall. He has a history of multiple fractures after a seemingly minor trauma. He also has “sky blue” sclera and an
aortic regurg murmur. His underlying problem is most likely due to a mutation in which one of the following proteins?

(A) Fibrillin

(B) Type 1 collagen

(c) Type IV collagen
(d) α1-Antitrypsin

(E) β-Myosin heavy chain

A

the answer is B.

The patient is exhibiting the signs of osteogenesis imperfecta, brittle bones, as exemplified by various mutations in type 1 collagen, the building blocks of the bones. The aortic regurgitation murmur is also due to a lack of type 1 collagen in the extracellular matrix of the aorta. Mutations in fibrillin give rise to Marfan syndrome, which does exhibit long bones, but not brittle or easily broken bones. Marfan syndrome would also be associated with lens dislocation, which is not occurring in this patient. Mutations in type IV collagen would lead to Alport syndrome, not brittle bones, and there is no mention of kidney/urine problems with the patient. A defect in α1-antitrypsin would lead to emphysema (not brittle bones), and a mutation in β-myosin heavy chain would lead to hypertrophic cardiomyopathy, not brittle bones.

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11
Q

A 1-year-old child, on a routine well child visit, was discovered to have cataract formation in both eyes. Blood work demonstrated elevated galactose and galactitol levels. In order to determine which enzyme might be defective in the child, which intracellular metabolite should be measured?

(A) Galactose

(B) Fructose

(C) Glucose

(D) Galactose-1-phosphate

(E) Fructose-1-phosphate

(F) Glucose-6-phosphate

A

The answer is D.

The child has a form of galactosemia. The elevated galactitol enters the lens of the eye, and is trapped. The difference in osmotic pressure across the lens of the eye leads to cataract formation. Galactose is phosphorylated by galactokinase to galactose 1-phosphate, which reacts with UDP-glucose in a reaction catalyzed by galactose-1-phosphate uridylyl transferase to form UDP-galactose and glucose 1-phosphate. An epimerase converts UDP-galactose to UDP-glucose. Deficiencies in either galactokinase (nonclassical) or galactose-1-phosphate uridylyl transferase (classical) result in galactosemia, with elevated levels of galactose and galactitol (reduced galactose) in the blood. An intracellular measurement of galactose-1- phosphate can allow a definitive diagnosis to be obtained (such levels would be nonexistent if the defect were in galactokinase, and the levels would be greatly elevated if the galactose1-phosphate uridylyl transferase enzyme were defective).

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12
Q

A patient is on a very low calorie liquid diet and must take supplements to ensure that he has the essential vitamins and minerals to maintain his health. Under the appropriate conditions, which one of the following compounds can be synthesized in humans, and would not need to be supplemented to the extent that the others are?

(A) Riboflavin

(B) Linoleic acid

(C) Leucine

(D) Thiamine

(E) Niacin

A

The answer is E.

Although niacin is a vitamin, it can be synthesized to a limited extent from tryptophan. None of the other vitamins indicated can be synthesized in humans to any extent.

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13
Q

A 6-month-old baby was doing well until he developed viral gastroenteritis and was unable to tolerate oral feeding for 2 days. He is admitted to the hospital with encephalopathy, cardiomegally and heart failure, poor muscle tone, and hypoketotic hypoglycemia. Blood work did not detect any medium-chain dicarboxylic acids.

Dietary supplementation of which one of the following would be beneficial to this patient?

(A) Pantothenic acid

(B) Niacin

(C) Riboflavin

(D) Carnitine

(E) Thiamine

A

The answer is D.

In many cases of primary carnitine deficiency, increasing the blood levels of carnitine is sufficient to allow some transport of carnitine into cells such that fatty acid oxidation can occur. While pantothenic acid (part of coenzyme A), niacin (the precursor for NAD1), and riboflavin (needed for FAD) are required for fatty acid oxidation, the rate-limiting step in these patients is the transport of the fatty acids from the cellular cytoplasm to the matrix of the mitochondria.

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14
Q

A patient presents with fatigue, and a blood count reveals a macrocytic, hyperchromic anemia. Which one of the following may account for this type of anemia?

(A) Lead poisoning

(B) Folate deficiency

(C) Hereditary spherocytosis

(D) Sideroblastic anemia

(e) Iron deficiency

A

The answer is B.

A folate deficiency leads to a megaloblastic anemia since DNA synthesis is inhibited in the absence of folate. Large cells are generated in the bone marrow because the cell enlarges in preparation for division, but the DNA does not replicate and the cell does not divide. All of the other answer choices suggested create a microcytic, hypochromic anemia. Lead poisoning interferes with heme synthesis, as does an iron deficiency. Under these conditions, the red cells released are small in size, as the final size is, in part, dependent on the intracellular concentration of heme (so if heme levels are low, the cell will be small). Sideroblastic anemia also results from a disruption in heme synthesis, for a variety of causes. Hereditary spherocytosis is due to mutations in red cell membrane proteins, which lead to early removal of these cells from the spleen.

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15
Q

A 33-year-old man had a screening colonoscopy, and was diagnosed with a right-sided, mucinous colon cancer, with no other lesions or polyps seen. The reason he had a colonoscopy at such an early age is that his father and paternal uncle had colon cancers diagnosed by age 40. His paternal grandmother had ovarian and uterine cancers. A likely defect in the patient is a reduction in the ability to carry out which one of the following processes?

(A) Removal of thymine dimers from the DNA

(B) Inability to remove the base U from DNA

(c) Loss of DNA ligase activity
(d) Inability to correct mismatched bases in newly synthesized DNA

(E) Inability to form a solenoid structure from individual nucleosomes

A

the answer is d.

The patient has HNPCC, which is due to specific mutations in proteins involved in mismatch repair (mutations in at least four different proteins have been identified that lead to HNPCC). Mismatch repair is not involved in thymine dimer removal, nor base excision repair (the removal of uracil from DNA). HNPCC does not involve a defective DNA ligase, nor does the disease result in defective DNA packaging (solenoid formation) in the nucleus.

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16
Q

A 42-year-old woman has slowly developed an inability to keep her eyes open at the end of the day. The eyelids droop, despite her best efforts to keep them open. This does not occur first thing in the morning. Further examination shows a generalized muscle weakness as the day progresses.

In order to diagnose the disease the patient is experiencing, a Western blot was run using the patient’s sera as the source of antibodies. The protein run on the gel would need to be which one of the following?

(A) Acetylcholinesterase

(B) Acetylcholine receptor

(C) Epinephrine receptor

(D) Catechol-O-methyltransferase

(E) Glucocorticoid receptor

(F) HMG-CoA reductase

A

The answer is B.

The woman has myasthenia gravis, which is due to the presence of autoimmune antibodies directed against the acetylcholine receptor in the neuromuscular junction. To confirm the diagnosis by Western blot, a sample of acetylcholine receptor would be run through a polyacrylamide gel, the protein transferred to filter paper, and the filter paper incubated with the patient’s sera. If the sera contain antibodies that bind to the acetylcholine receptor, the antibodies will be bound to the filter paper, and then visualized using a secondary antibody linked to a reporter enzyme. Controls would be done to indicate that sera from an individual who did not have myasthenia gravis did not allow for the formation of a band on the Western blot. Running acetylcholinesterase, the epinephrine receptor, catechol-O- methyltransferase, the glucocorticoid receptor, or HMG-CoA reductase on the gel would not allow detection of antibodies against the acetylcholine receptor in the patient’s blood sample.

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17
Q

An individual has been on a fad diet for 6 weeks, and has begun to develop a number of skin rashes, diarrhea, and forgetfulness. These symptoms could have been less severe if the diet contained a high content of which one of the following?

(A) Tyrosine

(B) Tryptophan

(C) Thiamine

(D) Thymine

(E) Riboflavin

A

The answer is B. The individual has developed pellagra due to a lack of dietary niacin. Although dietary niacin is the major source of the nicotinamide ring of NAD, it may also be produced from excess tryptophan. Tyrosine, thiamine, thymine, and riboflavin cannot contribute to the synthesis of the nicotinamide ring of NAD.

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18
Q

A 55-year-old Native American female had difficulty conceiving when she was young and was diagnosed with polycystic ovarian syndrome. When she did get pregnant, she was diagnosed with gestational diabetes, but successfully delivered a healthy 10-lb baby boy. She had difficulty controlling her weight over the next several years, but her blood glucose checks were always in the “normal” range and her only diagnosis prior to age 40 was sleep apnea. She has a strong family history of diabetes. At age 40, at a health fair, she had a finger-stick random blood glucose of 240. She made an appointment with her primary care doctor who ordered a fasting blood glucose (150) and a hemoglobin A1c (7.4). Other lab values were an HDL cholesterol of 35, total cholesterol of 210, triglycerides of 350, slightly elevated ALT, AST, and uric acid with normal BUN, creatinine, bilirubin, electrolytes, and alkaline phosphatase. Her blood pressure on repeated checks was consistently 150/90. For the next 15 years, she was tried on multiple different medications with only partial success. Currently, her height is 5′10″ (1.8 m), weight 220 lb (100 kg), BP 138/80, HbA1c 8.2, and creatinine 2.0. Her lipid values have not changed. Over the past 2 years, she has been hospitalized three times2for an MI, a community-acquired pneumonia (CAP), and gouty arthritis.

The woman’s BMI places her in which of the following categories?

(A) Underweight

(B) Normal weight

(C) Overweight

(D) Obese

(E) Morbidly obese

A

The answer is D.

A BMI <18.5 is considered underweight, 18.5 to 24.9 as normal weight, 25 to 29.9 as overweight, and >30 as obese. Some older classifications used >40 to signify morbidly obese. The calculated BMI and obesity classification can be important for insurance purposes especially if obesity surgery is considered.

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19
Q

A 4-year-old boy displays a failure to thrive, extreme sensitivity to the sun, hearing loss, severe tooth decay, pigmentary retinopathy, and premature aging. An analysis of fibroblasts from the boy demonstrated extensive DNA damage in cells trying to grow, but minimal damage in quiescent cells, which have a greatly reduced rate of transcription as compared to the growing cells. This child most likely has a defect in which one of the following processes?

(A) Repair of thymine dimers

(B) Base excision repair

(c) Nucleotide excision repair
(d) Mismatch repair

(E) Transcription-coupled DNA repair

A

the answer is E.

The child is exhibiting the symptoms of Cockayne syndrome, which is due to a defect in transcription-coupled DNA repair. During transcription of genes, if the RNA polymerase notices DNA damage, transcription will stop while the transcription-coupled DNA repair mechanism will correct the DNA damage. This syndrome can be due to mutations in either the ERCC6 or ERCC8 gene, and the protein products of both the genes are involved in repairing the DNA of actively transcribed genes. The key to answering the question is the amount of DNA damage in growing cells (which are transcriptionally active) versus the damage in quiescent cells (which express fewer genes). The symptoms described are also unique to individuals with this disorder. The repair of thymine dimers and the processes of base excision repair, nucleotide excision repair, and mismatch repair are all functional in individuals with this disorder.

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20
Q

Intrinsic factor deficiency

(A) Megaloblastic anemia

(B) Hypochromic, microcytic anemia

(C) Hemolytic anemia

(D) Sickle cell anemia

A

The answer is A.

Intrinsic factor is required for the absorption of dietary vitamin B12. Lack of B12 (or folate) results in a megaloblastic anemia. In a B12 deficiency, irreversible neurologic problems (due to demyelination) also occur. When decreased intrinsic factor causes a B12 deficiency, the condition is called pernicious anemia. An iron-deficiency anemia is characterized by small, pale red blood cells. The lack of iron reduces the synthesis of heme, so the red cells cannot carry as much oxygen (which gives them the pale color). The cells are small in order to maximize the concentration of hemoglobin present in the cells. Hemolytic anemia occurs when the red cell membrane fragments, which can occur with pyruvate kinase deficiencies or a lack of glucose-6-phosphate dehydrogenase activity (which results in reduced NADPH levels). Sickle cell anemia is caused by a point mutation in the β-globin gene, substituting a valine for a glutamic acid.

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21
Q

A 32-year-old female has developed breast cancer. Her mother and one maternal aunt had breast cancer and her maternal grandmother had ovarian cancer. Which of the following best describes the mechanism behind this inherited problem?

(A) A tumor suppressor leading to loss of apoptosis

(B) A tumor suppressor leading to an inability to repair DNA

(C) A tumor suppressor leading to a constitutively active MAP kinase pathway

(D) An oncogene leading to loss of apoptosis

(E) An oncogene leading to an inability to repair DNA

(F) An oncogene leading to a constitutively active MAP kinase pathway

A

The answer is B.

Hereditary breast cancer is due to inherited mutations in either of the tumor suppressor genes BRCA1 or BRCA2. These genes encode proteins that play important roles in DNA repair (primarily single- and double-strand breaks), and it is the loss of this function that predisposes the patient to breast and ovarian cancers. The inability to repair the breaks in the backbone leads to errors during replication, and mutations will develop that eventually lead to a loss of growth control. This is a loss-of-function disorder, which characterizes the genes involved as tumor suppressors. Inheriting one mutated copy of BRCA1 means that the other, normal copy of BRCA1 must be lost in a particular cell in order to initiate the disease (loss of heterozygosity). For breast cancer, this occurs 85% of the time (penetrance upon inheriting a BRCA1 or BRCA2 mutation). An oncogene is a dominant gene, so only one mutated copy can bring about the disease. BRCA1 or BRCA2 mutations do not directly lead to a loss of apoptosis, or to a constitutively active MAP kinase pathway.

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22
Q

A 55-year-old Native American female had difficulty conceiving when she was young and was diagnosed with polycystic ovarian syndrome. When she did get pregnant, she was diagnosed with gestational diabetes, but successfully delivered a healthy 10-lb baby boy. She had difficulty controlling her weight over the next several years, but her blood glucose checks were always in the “normal” range and her only diagnosis prior to age 40 was sleep apnea. She has a strong family history of diabetes. At age 40, at a health fair, she had a finger-stick random blood glucose of 240. She made an appointment with her primary care doctor who ordered a fasting blood glucose (150) and a hemoglobin A1c (7.4). Other lab values were an HDL cholesterol of 35, total cholesterol of 210, triglycerides of 350, slightly elevated ALT, AST, and uric acid with normal BUN, creatinine, bilirubin, electrolytes, and alkaline phosphatase. Her blood pressure on repeated checks was consistently 150/90. For the next 15 years, she was tried on multiple different medications with only partial success. Currently, her height is 5′10″ (1.8 m), weight 220 lb (100 kg), BP 138/80, HbA1c 8.2, and creatinine 2.0. Her lipid values have not changed. Over the past 2 years, she has been hospitalized three times2for an MI, a community-acquired pneumonia (CAP), and gouty arthritis.

Which one of the following is closest to her calculated BMI?

(A) 25

(B) 31

(C) 35

(D) 41

(E) 45

A

The answer is B.

BMI (body mass index) is calculated as weight in kilograms over height in meters squared. The calculation in this patient would be 100 kg/(1.8 m)2 or 100/3.24, which would equal 30.9

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23
Q

Folate deficiency

(A) Megaloblastic anemia

(B) Hypochromic, microcytic anemia

(C) Hemolytic anemia

(D) Sickle cell anemia

A

The answer is A. Folate deficiency results in a megaloblastic anemia because of decreased production of purines and the pyrimidine thymine. Thus, lack of folate causes decreased DNA synthesis. In contrast with a vitamin B12 deficiency, neurologic problems do not occur in a folate deficiency. A hypochromic, microcytic anemia can result from the lack of iron, or lack of pyridoxal phosphate. Both conditions lead to a reduction in the synthesis of heme, so the red cells cannot carry as much oxygen (which gives them the pale color). The cells are small in order to maximize the concentration of hemoglobin present in the cells. Hemolytic anemia occurs when the red cell membrane fragments, which can occur with pyruvate kinase deficiencies or a lack of glucose-6-phosphate dehydrogenase activity (which results in reduced NADPH levels). Sickle cell anemia is caused by a point mutation in the β-globin gene, substituting a valine for a glutamic acid.

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24
Q

A 40-year-old male is well controlled on warfarin for a factor V leiden deficiency and recurrent deep vein thrombosis. He presents today with a community-acquired pneumonia, and is placed on erythromycin. Three days later, he develops bleeding and his INR is 8.0 (indicating an increased time for blood clotting to occur, where INR is international normalized ratio). Which of the following best explains why this bleeding occurred?

(A) The erythromycin inhibited cytochrome P450

(B) The erythromycin stimulated cytochrome P450

(c) The causative agent of the pneumonia inhibited vitamin K utilization
(d) The causative agent of the pneumonia stimulated vitamin K utilization

(E) The erythromycin inhibited mitochondrial translation

(F) The erythromycin inhibited mitochondrial transcription

A

the answer is A.

Warfarin is metabolized by a specific subset of induced p450 isozymes. The p450 system is used by cells to modify the xenobiotic (in this case the warfarin) such that it can be more easily excreted. Erythromycin, along with other macrolide antibiotics, inhibits the p450 oxidizing system, which in this case would lead to a higher blood level of warfarin and, therefore, the balance of clotting and bleeding is shifted toward excessive bleeding. A stimulation of p450 production by erythromycin would lead to a lower level of warfarin (due to increased metabolism and loss of warfarin by p450) and the potential of excessive clotting. This effect of p450 is a common drug-drug interaction. The causative agents of communityacquired pneumonia do not affect vitamin K absorption in the small intestine, or distribution throughout the body. Erythromycin does not affect mitochondrial transcription, although it may affect mitochondrial translation. Inhibition of mitochondrial protein synthesis, however, will not alter the inhibition of cytochrome p450 activity, and the increased levels of warfarin present, which may lead to increased bleeding.

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25
Q

A homeless man was seen at a clinic because of bleeding gums and loosening teeth. His dietary history revealed that he has been consuming only chocolate milk and fast-food hamburgers for the past 6 months. 12. The patient is exhibiting these symptoms due to which one of the following?

(A) Reduced synthesis of fibrillin

(B) Reduced synthesis of collagen

(C) Reduced hydrogen-bond formation in collagen

(D) Increased hydrogen-bond formation in collagen

(E) Reduced disulfide-bond formation in collagen

(F) Increased disulfide-bond formation in collage

A

The answer is C. The homeless man has developed scurvy owing to a lack of vitamin C in his diet. Vitamin C is a required cofactor for the hydroxylation of proline and lysine within the collagen molecule. The lack of hydroxyproline reduces the stability of the collagen because of reduced hydrogen-bonding capabilities within the collagen triple helix. The lack of vitamin C does not affect disulfide-bond formation, which is required to initiate triple-helix formation within the cell. Fibrillin is not altered by the lack of vitamin C; it is the protein mutated in Marfan’s syndrome

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26
Q

A homeless man was seen at a clinic because of bleeding gums and loosening teeth. His dietary history revealed that he has been consuming only chocolate milk and fast-food hamburgers for the past 6 months.

The patient, due to his diet, had become deficient in which one of the following vitamins, which would lead to the symptoms observed?

(A) Vitamin A

(B) Vitamin C

(C) Vitamin B1

(D) Vitamin B2

(E) Vitamin B6

A

The answer is B. Scurvy is due to a lack of vitamin C, which is obtained from citrus fruits, which have been lacking in the diet. The patient may also become deficient in the other vitamins listed, but the lack of those vitamins will not lead to the symptoms characteristic of scurvy.

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27
Q

A 6-month-old baby was doing well until he developed viral gastroenteritis and was unable to tolerate oral feeding for 2 days. He is admitted to the hospital with encephalopathy, cardiomegally and heart failure, poor muscle tone, and hypoketotic hypoglycemia. Blood work did not detect any medium-chain dicarboxylic acids.

Once this baby is diagnosed and treated, his diet will need to be very restricted. Theoretically, which one of the following fatty acids will he be able to consume and metabolize?

(A) An 8-carbon fatty acid

(B) A 14-carbon fatty acid

(C) A 20-carbon fatty acid

(D) Only unsaturated fatty acids, regardless of chain length

(E) Only saturated fatty acids, regardless of chain length

A

The answer is A.

This baby has primary carnitine deficiency, an autosomal recessive disorder. The lack of medium-chain dicarboxylic acids in the blood rules out an MCAD deficiency. He is unable to transport blood-borne carnitine into the muscle and liver, thereby blocking fatty acid oxidation in those tissues. Carnitine is required to transfer most fatty acids from the cytoplasm to the matrix of the mitochondria. However, short- and medium-chain fatty acids (up to 10 or 12 carbons) are sufficiently water-soluble such that they can enter cells and be transferred into the mitochondria in the absence of carnitine. Once inside the mitochondria, an acyl-CoA synthetase will activate the fatty acid to an acyl-CoA such that β-oxidation can occur. The transfer is not affected whether the fatty acid is saturated or unsaturated; the chain length is the determining factor. Dietary restriction of long-chain fatty acids is essential to treat this disorder and alleviate the symptoms. The patient was doing well while feeding on a regular schedule because of the carbohydrate in the diet. Once the child had an extended fast, and needed to oxidize fatty acids for energy, the symptoms of carnitine deficiency became apparent. The hypoketotic hypoglycemia is a strong indication that the problem is in fatty acid oxidation

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28
Q

Patients with both Graves disease and Cushing syndrome are overproducing hormones that have which one of the following in common?

(A) Reacting with receptors in the cell membrane

(B) Utilizing second messengers

(C) Binding to intracellular receptors

(D) Binding to RNA to produce physiologically active proteins

(E) Inducing rRNA to ablate a particular genes expression

A

The answer is C.

Graves disease is due to the hypersecretion of thyroid hormone, whereas Cushing syndrome is an overproduction of cortisol. Steroid hormones and thyroid hormones cross the cell membrane and bind to intracellular receptors. The hormone–receptor complex binds to DNA, not RNA. Polypeptide hormones and epinephrine react with the receptors in the cell membrane triggering second messengers to transmit the signal that the receptor is occupied. Ribosomal RNA (rRNA) does not ablate gene expression; the induction of micro RNA has that ability

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29
Q

A 6-month-old baby was doing well until he developed viral gastroenteritis and was unable to tolerate oral feeding for 2 days. He is admitted to the hospital with encephalopathy, cardiomegally and heart failure, poor muscle tone, and hypoketotic hypoglycemia. Blood work did not detect any medium-chain dicarboxylic acids.

Which one of the following foods or supplements would be allowable on the above patient’s restricted diet?

(A) Coconut oil

(B) Tuna

(C) Walnuts

(D) Spinach

(E) Oleic acid supplements

A

The answer is A.

The patient has a primary carnitine deficiency and can only metabolize medium-chain fatty acids. Coconut oil is high in medium-chain saturated fatty acids. Tuna and certain nuts are high in very long-chain fatty acids and omega-3 fatty acids. Spinach is a good source of ALA (alpha-linolenic acid), and omega-6 fatty acids. Oleic acid is a cis-Δ9 C18:1 fatty acid, and would not be metabolized in a child lacking carnitine in the cells

30
Q

A 43-year-old female has been on a “grapefruit and potatoes” diet for several months in an effort to lose weight. She now complains of a rash covering most of her body, a large, beefy tongue, nausea and diarrhea, and some confusion.

Which one of the following cofactors or enzyme complexes would be most affected by this condition?

(A) The concentration of NAD+

(B) The concentration of FAD

(C) The concentration of coenzyme Q

(D) The functioning of the FMN components of complex I

(E) The functioning of the cytochrome- containing components of complex III

A

The answer is A.

This patient has the classic symptoms of pellegra, a vitamin B3 (niacin) deficiency. NAD+ is derived from niacin. Pellagra leads to the four Ds–dermatitis, dementia, diarrhea, and death. Riboflavin is the precursor for both FAD and FMN. Coenzyme Q is synthesized from acetyl-CoA, and its levels would not be affected as much as those of NAD+. Heme is synthesized from succinyl-CoA and glycine, and a reduction in heme levels would lead to an anemia and not the symptoms as described for this patient

31
Q

A 15-year-old boy was diagnosed with skin cancer. He had always been sensitive to sunlight, and had remained indoors for most of his life. An analysis of his DNA, from isolated fibroblasts, indicated an increased level of thymine dimers when the cells were exposed to UV light. The boy developed a skin tumor owing to an increased mutation rate, which was caused by which one of the following?

(A) A lack of DNA primase activity

(B) Decreased recombination during mitosis

(c) Increased recombination during mitosis
(d) Loss of base excision repair activity

(E) Loss of nucleotide excision repair activity

A

the answer is E.

The damage to the DNA caused by UV light (pyrimidine dimers) can be repaired by the nucleotide excision repair pathway. In some cases, the missing enzyme is a repair endonuclease. The boy has XP, as determined by the increase in thymine dimers in his DNA after exposure to UV light. Since the dimers cannot be repaired, the DNA polymerase will “guess” when replication occurs across the dimers, increasing the mutation rate of the cells. Eventually, a mutation occurs in a gene that regulates cell proliferation, and a cancer results. An increase or decrease in mutation rate is not related to the rate of recombination during mitosis, nor to a lack of DNA primase activity (which would lead to reduced DNA synthesis, not inaccurate DNA synthesis). Base excision repair is normal in patients with XP.

32
Q

A 40-year-old chronic alcoholic enters the hospital because of a variety of symptoms, including loss of feeling in his hands and feet, nystagmus, and difficulty with his balance when walking. This patient would have difficulty catalyzing which one of the following reactions?

(A) α-Ketoglutarate dehydrogenase

(B) Succinate dehydrogenase

(C) Fumarase

(D) Malate dehydrogenase

(E) Pyruvate carboxylase

A

The answer is A.

The patient is exhibiting the symptoms of beriberi, due to a vitamin B1 deficiency. Thiamine (B1) is required for oxidative decarboxylation reactions, such as those catalyzed by pyruvate dehydrogenase and α-ketoglutarate dehydrogenase. α-Ketoglutarate dehydrogenase requires thiamine (as thiamine pyrophosphate), lipoic acid, CoASH, FAD, and NAD+. Succinate dehydrogenase only requires FAD, fumarase has no cofactor requirement, malate dehydrogenase requires NAD+, and pyruvate carboxylase requires biotin

33
Q

A contestant on a TV reality show, in which the contestants had to survive off the land for an extended period of time, developed recurrent diarrhea, dermatitis, and had trouble remembering things. These symptoms could be brought about due to the lack of which one of the following in the contestant’s diet?

(A) Niacin

(B) Thiamine

(C) Riboflavin

(D) Vitamin C

(E) Vitamin D

A

The answer is A.

The contestant has the symptoms of pellagra, which is characterized by the four Ds (i.e., diarrhea, dermatitis, dementia, and eventual death). Pellagra is due to a lack of niacin in the diet. A thiamine deficiency will lead to beriberi; a riboflavin deficiency to ariboflavinosis; a vitamin C deficiency to scurvy; and a vitamin D deficiency to rickets. Only pellagra would yield the symptoms observed by the patient

34
Q

A 2-day-old infant born at 32 weeks gestation has had breathing difficulties since birth and is currently on a respirator and 100% oxygen. These difficulties occur due to which one of the following?

(A) An inability of the lung to contract to exhale

(B) An inability of the lung to expand when taking in air

(C) An inability of the lung to respond to insulin

(D) An inability of the lung to respond to glucagon

(E) An inability of the lung to produce energy

A

The answer is B.

The baby has respiratory distress syndrome, due to an inability to produce surfactant, a hydrophobic molecule that is secreted by the type II cells in the lung and coats the airways, reducing surface tension during contraction, and allowing relatively easy expansion of the lung during inhalation. This is due to the lungs not yet producing surfactant, which contains a few proteins and a large amount of dipalmitoylphosphatidyl choline. Respiratory distress syndrome is not related to insulin or glucagon response by the lung, or the ability of the lung cells to generate energy

35
Q

A 42-year-old man was feeling tired and lethargic, and blood work indicated an iron deficiency. A colonoscopy indicated a significant right-sided mass in his proximal colon. His family history indicated that his grandfather and mother both had colon cancer in their late 40s. There were very few polyps viewed during the colonoscopy.

The analysis of the pedigree for the patient in the previous question would reveal which type of inheritance pattern?

(A) Autosomal dominant

(B) Autosomal recessive

(C) X-linked dominant

(D) X-linked recessive

(E) Mitochondria

A

The answer is A.

The genes that lead to HNPCC are tumor suppressor genes, but upon analysis in a pedigree the disease appears to be autosomal dominant. This is due to the finding that if an individual inherits a mutation in one of the genes involved in mismatch repair, there is close to a 100% probability that a loss of heterozygosity will occur, such that the person contracts the disease. This conundrum was first identified by Knudson, who formed the hypothesis to explain how recessive oncogenes can appear dominant in a pedigree. The loss of heterozygosity can occur in multiple ways, but the end result is the loss of activity of the functional allele, and a loss of mismatch repair activity.

36
Q

A medical student has been exposed to a patient with tuberculosis and developed a positive tuberculin test (PPD), but exhibited a normal chest X-ray. He is placed on a 6-month course of prophylactic treatment, but subsequently develops peripheral neuropathies.

Which of the following vitamins would be considered a treatment for the neurotoxicity?

(A) B1

(B) B2

(C) B3

(D) B6

(e) B12

A

The answer is D.

The treatment for a positive PPD test (tuberculosis) is isoniazid, which can interfere with vitamin B6 (pyridoxine) function in cells. Pyridoxine is activated to PLP in cells (the active form of the vitamin), and isoniazid blocks this activation. A deficiency of B6 can lead to peripheral neuropathy, as B6 is required for the conversion of tryptophan to niacin. In many cases, vitamin B6 is given along with isoniazid to prevent these side effects from occurring (by providing more substrate than the isoniazid can bind to). Isoniazid does not affect thiamine (B1), riboflavin (B2), niacin (B3), or cobalamin (B12) metabolism, although riboflavin is required to activate pyridoxine.

37
Q

NADPH deficiency deficiency

(A) Megaloblastic anemia

(B) Hypochromic, microcytic anemia

(C) Hemolytic anemia

(D) Sickle cell anemia

A

The answer is C.

Deficiency of glucose-6-phosphate dehydrogenase results in decreased production of NADPH by the pentose phosphate pathway during oxidative stress. The components of cell membranes are oxidized, and a hemolytic anemia results, as the protective glutathione (the reduced form) cannot be regenerated due to the lack of NADPH. A hypochromic, microcytic anemia can result from the lack of iron, or lack of pyridoxal phosphate. Both conditions lead to a reduction in the synthesis of heme, so the red cells cannot carry as much oxygen (which gives them the pale color). The cells are small in order to maximize the concentration of hemoglobin present in the cells. Hemolytic anemia occurs when the red cell membrane fragments, which can occur with pyruvate kinase deficiencies or a lack of glucose-6-phosphate dehydrogenase activity (which results in reduced NADPH levels). Sickle cell anemia is caused by a point mutation in the β-globin gene, substituting a valine for a glutamic acid.

38
Q

A 20-year-old male presents with weight loss, heat intolerance, bilateral exophthalmos, a lid lag, sweating, and tachycardia. These symptoms are due to an increased production and secretion of a hormone that is derived from which one of the following?

(A) Cholesterol

(B) Dopamine

(C) Tryptophan

(D) Tyrosine

(E) Glutamate

A

The answer is D.

The patient has Graves disease hyperthyroidism, an overproduction of thyroid hormone, which is derived from tyrosine. Hyperthyroidism increases the rate of oxidation of fuels by muscle and other tissues, increasing heat production, and causes a sense of heat intolerance and increased sweating. The heart rate and blood pressure are also increased, as is weight loss in spite of a healthy appetite. Dopamine (a catecholamine) is also derived from tyrosine and can be hydroxylated to norepinephrine, which can then be methylated to epinephrine, but the catecholamines cannot be transformed to thyroxine. Tryptophan can be metabolized into serotonin and melatonin. Cholesterol is the basis of the steroid hormones progesterone, testosterone, estradiol, cortisol, and aldosterone. Glutamate gives rise to GABA via a decarboxylation reaction.

39
Q

A chronic alcoholic has recently had trouble with their ability to balance, becomes easily confused, and displays nystagmus. An assay of which of the following enzymes can determine a biochemical reason for these symptoms?

(A) Isocitrate dehydrogenase

(B) Transaldolase

(C) Glyceraldehyde-3-phosphate dehydrogenase

(D) Transketolase

(E) Glucose-6-phosphate dehydrogenase

A

The answer is D.

The patient has the symptoms of beriberi, which is due to a thiamine deficiency. Of the enzymes listed, transketolase would be less active because it requires thiamine pyrophosphate as a cofactor. The other enzymes listed do not require cofactors except for the three dehydrogenases, which require either NAD1 or NADP1, depending on the enzyme.

40
Q

A premature infant, when born, had low Apgar scores and was having difficulty breathing. The NICU physician injected a small amount of a lipid mixture into the child’s lungs, which greatly reduced the respiratory distress the child was experiencing. In addition to proteins, a key component of the mixture was which one of the following?

(A) Sphingomyelin

(B) A mixture of gangliosides

(C) Triacylglycerol

(D) Phosphatidylcholine

(E) Prostaglandins E and F

A

The answer is D.

The premature infant is experiencing respiratory distress syndrome, which is caused by a deficiency of lung surfactant. The lung cells do not begin to produce surfactant until near birth, and premature infants frequently are not producing sufficient surfactant to allow the lungs to expand and contract as needed. The surfactant is composed of a number of hydrophobic proteins and dipalmitoylphosphatidylcholine. Sphingomyelin, gangliosides, triglyceride, and prostaglandins are not components of the surfactant. The phosphatidylcholine content of the surfactant is 85% of the total lipids associated with the complex.

41
Q

A patient who is obese and has hypertension requires a weight-reduction diet. She weighs 176 lb and has a sedentary lifestyle.

What is the approximate number of calories the patient burns each day at this weight?

(A) 1,920

(B) 2,500

(C) 3,350

(D) 4,220

(E) 5,490

A

The answer is B.

The patient’s weight (176 lb 3 0.454 lb/kg) is 80 kg. Since the basal metabolic rate (BMR) is approximately 24 kcal/kg/day, her BMR (24 kcal/kg/day 3 80 kg) is 1,920 kcal/day. She requires 30% more calories for her activity (sedentary), or 1,920 3 1.3 5 2,500 kcal/day

42
Q

Which is higher in the blood of a person with an aldolase B deficiency than in a normal person?

(A) Glucose

(B) Galactose

(C) Fructose

(D) Glucose and galactose

(E) Glucose, galactose, and fructose

A

The answer is C.

An aldolase B deficiency (fructose intolerance) results in a decreased ability to cleave fructose 1-phosphate. This compound increases in liver cells and its precursor, fructose, increases in the blood. Glucose and galactose would not be affected under these conditions

43
Q

A 42-year-old woman has slowly developed an inability to keep her eyes open at the end of the day. The eyelids droop, despite her best efforts to keep them open. This does not occur first thing in the morning. Further examination shows a generalized muscle weakness as the day progresses.

In addition to the answer to the previous question (a drug that may help stabilize this condition would inhibit acetylcholinesterase), a drug that may help to stabilize this condition would do which one of the following?

(A) Stimulate apoptosis

(B) Inhibit apoptosis

(C) Stimulate cell growth

(D) Inhibit cell growth

(E) Induce muscle growth

(F) Inhibit muscle growth

A

The answer is A.

The woman has myasthenia gravis, which is due to an autoimmune disorder in which antibodies directed against the acetylcholine receptor block the ability of acetylcholine to stimulate the muscle cells at the neuromuscular junction. Immunosuppressants can be taken to reduce the autoantibody production. Such drugs work, in part, through the activation of the tumor necrosis factor receptor, which activates apoptosis in the cells, leading to their destruction. Inhibiting apoptosis would exacerbate the problem, as the antibody-producing cells would survive longer and continue to produce the antibodies directed against the acetylcholine receptor. Drugs affecting the muscle would not help with this disorder, as it is a problem unique to the acetylcholine receptor expressed on the muscle surface. Stimulation or inhibition of cell growth does not stop the antibody-producing cells from continuing to make antibodies, and would not be an effective drug target for this disease.

44
Q

An 8-year-old boy has failure to thrive, alopecia totalis, localized scleroderma, a small face and jaw, a “beak” nose, wrinkled skin, and stiff joints. He is determined to have a singlepoint mutation in a nuclear protein, which is a silent mutation in terms of the primary structure of the protein. How could such a mutation lead to a disease?

(A) Through altering the tertiary structure of the protein

(B) Inhibiting DNA replication

(c) By introducing a premature stop codon into the protein
(d) By creating an alternative splice site in the gene

(E) By creating an alternative start site for transcription in the gene

A

the answer is d.

The child is expressing the symptoms of Hutchinson–Gilford progeria, a premature aging disease, which is due to a mutation in the LMNA gene, which encodes lamin A, a nuclear protein. The most common mutation is C1824T, in which the normal cytosine at position 1,824 of the gene is replaced by a thymine. This is a silent mutation as far as the protein is concerned–G608G. However, the introduction of the T creates a cryptic splice site in the gene, such that as the hnRNA is processed, a lamin A mRNA is created that is missing 150 nucleotides, corresponding to a loss of 50 amino acids near the carboxy terminal of the protein. Under normal conditions, lamin A is farnesylated, which allows the protein to be attached to the endoplasmic reticulum membrane. During processing, the enzyme AMPSTE24 cleaves part of the carboxy terminal, releasing the farnesylated portion of the protein such that lamin A can be transferred to the nucleus, where it is involved in providing a scaffold for the nuclear membrane. In the mutant protein (progerin), the site of cleavage is lost owing to the loss of the C-terminal amino acids, although the site of farnesylation still remains. Thus, the progerin that reaches the nucleus is still bound to the nuclear membrane, distorting the nuclear membrane and contributing to nuclear instability. Chromatin binding to the nuclear membrane is also altered, as are the phosphorylation sites in progerin, which makes it more difficult for the nuclear membrane to dissolve during mitosis. Since this is a silent mutation in the mature protein, the tertiary structure of the protein is not altered, and a premature stop codon has not been introduced into the protein (that would be a nonsense mutation, not a silent mutation). Since the protein amino acid sequence is initially the same, an alternative start site for transcription has not been created, nor does a simple base change lead to an inhibition of DNA replication.

45
Q

A patient complains of nervousness, palpitations, sweating, and weight loss without loss of appetite and has a goiter. Suspecting a defect in thyroid function, the physician orders a total serum T4. The test is performed by radioimmunoassay. The standard curve for the assay, which measures T4 in 0.1 mL of serum, is shown below. The normal levels of T4 are 4 to 10 μg/dL. In an assay of 0.1 mL of the patient’s
serum, 15% of the radioactive T4 was bound to the antibody.

The TSH levels in the patient’s blood were also measured by radioimmunoassay. If pituitary function is normal, the patient’s TSH levels will most likely be which one of the following?

(A) Higher than normal

(B) Normal

(C) Lower than normal

A

The answer is C.

Thyroid hormone suppresses TSH secretion by the anterior pituitary. If thyroid hormone levels are elevated, TSH levels will be lower than normal. This patient probably has Graves disease, in which thyroid-stimulating antibodies promote T3 and T4 production by the thyroid gland. These thyroid hormones inhibit the release of TSH from the anterior pituitary.

46
Q

A man has just received his fourth DUI citation. The judge orders an alcohol dependency program complete with a medication that makes him have nausea and vomiting if he drinks alcohol while taking the medication. The drug-induced illness is due to the buildup of which one of the following?

(A) Ethanol

(B) Acetaldehyde

(C) Acetate

(D) Acetyl-CoA

(E) Acetyl phosphate

A

The answer is B.

The court-ordered medication is disulfiram. Disulfiram inhibits aldehyde dehydrogenase, which greatly reduces the amount of acetaldehyde that is converted to acetate. This causes an accumulation of acetaldehyde, which is the substance responsible for the symptoms of a “hangover,” including nausea and vomiting. Alcohol dehydrogenase reduces ethanol to acetaldehyde. Acetyl-CoA synthetase converts acetate to acetyl-CoA

47
Q

Rickets

(A) Vitamin C

(B) Niacin

(C) Vitamin D

(D) Biotin

(E) Thiamine

A

The answer is C.

A dietary deficiency of vitamin D causes rickets. Scurvy is caused by lack of vitamin C. Pellagra is due to a dietary deficiency of niacin, and beriberi is due to a lack of thiamine (vitamin B1).

48
Q

A common polymorphism in the US population is a variant of N5,N10-methyleneFH4 reductase, which has a reduced activity at 37°C as compared to 32°C. A person expressing this variant enzyme would have difficulty producing which one of the following at the nonpermissive temperature?

(A) Creatine phosphate from creatine

(B) Pyrimidines required for RNA synthesis

(C) The thymine nucleotide required for DNA synthesis

(D) Phosphatidylcholine from diacylglycerol and CDP-choline

(e) All deoxyribonucleotides

A

The answer is C.

The only pyrimidine that requires folate for its synthesis is thymine (dUMP → dTMP). Folate is required for the incorporation of carbons 2 and 8 into all purine molecules. The synthesis of creatine phosphate and of phosphatidylcholine do not require folate. Folate deficiencies during pregnancy can lead to neural tube defects (e.g., spina bifida) in the fetus. Deoxyribonucleotide synthesis requires ribonucleotide reductase, which uses thioredoxin, and does not require a folate derivative

49
Q

A medical student has been exposed to a patient with tuberculosis and developed a positive tuberculin test (PPD), but exhibited a normal chest X-ray. He is placed on a 6-month course of prophylactic treatment, but subsequently develops peripheral neuropathies.

Considering the potential vitamin deficiency in this patient, which class of molecules would be most affected by the lack of the vitamin?

(A) Carbohydrates

(B) Amino acids

(C) Fatty acids

(D) Cholesterol

(e) Phospholipids

A

The answer is B.

PLP (from vitamin B6) is the major coenzyme of amino acid metabolism, as it participates in amino acid decarboxylation, amino acid racemization, ß-elimination reactions, ß-addition reactions, transaminations, and γ-elimination reactions. PLP is also a required cofactor for glycogen phosphorylase, but the majority of reactions that utilize this cofactor have amino acids as a substrate.

50
Q

A 42-year-old man was feeling tired and lethargic, and blood work indicated an iron deficiency. A colonoscopy indicated a significant right-sided mass in his proximal colon. His family history indicated that his grandfather and mother both had colon cancer in their late 40s. There were very few polyps viewed during the colonoscopy.

This patient most likely has an initiating mutation in which one of the following genes?

(A) BRCA1 or BRCA2

(B) Retinoblastoma

(C) The APC gene

(D) DNA mismatch repair genes

(E) The ras gene

A

The answer is D.

The patient has hereditary nonpolyposis colorectal cancer (HNPCC), which is primarily right-sided and due to mutations in any of seven different genes involved in mismatch repair (which is distinct from the generalized DNA repair system, mutations in which lead to xeroderma pigmentosum). These genes are all tumor suppressor genes. A mutation in the APC gene would lead to adenomatous polyposis coli, another form of colon cancer, which consists of many polyps, and is not restricted to the right side of the colon. Mutations in BRCA1 and BRCA2, both of which are involved in DNA repair, are linked to breast cancer, not to colon cancer. Mutations in the Rb gene do not lead to colon cancer. While the ras gene may become activated in HNPCC, it is not the initiating mutation that leads to the disease2that is due to the loss of a component of the DNA mismatch repair system.

51
Q

An 8-month-old baby girl had normal growth and development for the first few months, but then progressively deteriorated with deafness, blindness, atrophied muscle, inability to swallow, and seizures. Early on in the diagnosis of the child, it was noticed that a cherry red macula was present in both eyes. Considering the child in the above case, measurement of which one of the following would enable one to determine whether the mutation were in the hex A or hex B gene?

(A) GM1

(B) GM2

(C) Globoside

(D) Glucocerebroside

(E) Ceramide

A

The answer is C.

The child is exhibiting the symptoms of either Tay–Sachs or Sandhoff’s disease, both of which are sphingolipidoses. The hex A gene codes for hexosaminidase A, whereas the hex B gene codes for hexosaminidase B. The hex A protein consists of two A and two B subunits, and cleaves only GM2. The hex B protein is a B tetramer, and cleaves both GM2 and globoside. In Tay–Sachs disease, a loss of hex A activity, globoside degradation is normal as the hex B protein is normal. The loss of hex B activity affects both hex A (since two subunits are of the B variant) and hex B (tetramer) activity, and globoside will accumulate in Sandhoff’s disease, but not Tay-Sachs disease.

52
Q

Questions 118 to 121 are matching questions. A dietary deficiency of a vitamin can cause each of the conditions below. Match each condition with the appropriate vitamin. An answer may be used once, more than once, or not at all.

  1. Scurvy

(A) Vitamin C

(B) Niacin

(C) Vitamin D

(D) Biotin

(E) Thiamine

A
  1. The answer is A. Scurvy is caused by lack of vitamin C. Pellagra is due to a dietary deficiency of niacin, beriberi is due to a lack of thiamine (vitamin B1), and rickets from a lack of vitamin D.
53
Q

Iron deficiency

(A) Megaloblastic anemia

(B) Hypochromic, microcytic anemia

(C) Hemolytic anemia

(D) Sickle cell anemia

A

The answer is B.

An iron-deficiency anemia is characterized by small, pale red blood cells. The lack of iron reduces the synthesis of heme, so the red cells cannot carry as much oxygen (which gives them the pale color). The cells are small in order to maximize the concentration of hemoglobin present in the cells. A megaloblastic anemia is due to deficiencies in either vitamin B12 or folic acid (a lack of intrinsic factor will lead to a B12 deficiency named pernicious anemia). These cells are large because the vitamin deficiency interferes with DNA synthesis, and the cells double in size without being able to replicate their DNA. Once the anemia begins, the large blast cells are released by the marrow in an attempt to control the anemia. Hemolytic anemia occurs when the red cell membrane fragments, which can occur with pyruvate kinase deficiencies or a lack of glucose-6-phosphate dehydrogenase activity (which results in reduced NADPH levels). Sickle cell anemia is caused by a point mutation in the β-globin gene, substituting a valine for a glutamic acid.

54
Q

A physician working in a refugee camp in Africa notices a fair number of children with emaciated arms and legs, yet a large protruding stomach and abdomen. An analysis of the children’s blood would show significantly reduced levels of which one of the following as compared with those in a healthy child?

(A) Glucose

(B) Ketone bodies

(C) Albumin

(D) Fatty acids

(E) Glycogen

A

The answer is C.

The children are exhibiting the effects of kwashiorkor, a disorder resulting from adequate calorie intake but insufficient calories from protein. This results in the liver producing less serum albumin (due to the lack of essential amino acids), which affects the osmotic balance of the blood and the fluid in the interstitial spaces. Owing to the reduction in osmotic pressure of the blood, water leaves the blood and enters the interstitial spaces, producing edema in the children (which leads to the expanded abdomen). The children are degrading muscle protein to allow the synthesis of new protein (due to a lack of essential amino acids), and this leads to the wasting of the arms and legs of children with this disorder. The children will exhibit normal or slightly elevated levels of ketone bodies and fatty acids in the blood, as the diet is calorie sufficient. Glycogen levels may only be slightly reduced (since the diet is calorie sufficient), but glycogen is not found in the blood. Glucose levels will be only slightly reduced, as gluconeogenesis will keep glucose levels near normal.

55
Q

A chronic alcoholic was found unconscious near a local bar, and was taken to the emergency department at the local hospital. Lab work demonstrated a blood glucose level of 44 mg/dL (the normal fasting level is 80 to 100 mg/dL). Thiamine levels were also determined to be significantly below normal. The physical exam indicated a yellow sclera, and a slight yellowing of the skin.

In order to determine thiamine levels, the lab would be able to assay which one of the following enzymes, both in the absence and presence of exogenous thiamine?

(A) Isocitrate dehydrogenase

(B) Glycogen phosphorylase

(C) Adenosine deaminase

(D) Aldolase

(E) Transketolase

A

The answer is E.

Of the enzymes listed, only transketolase requires thiamine for activity. Transketolase is easily obtained from red blood cells, and upon measuring its activity in the presence and absence of exogenous thiamine, one can easily determine whether the patient is thiamine-deficient. If the addition of thiamine increases transketolase activity, the patient was deficient in thiamine

56
Q

A newborn has found to be very photophobic, and his skin burns even with minimal exposure to sunlight, eventually forming skin blisters. Neither parent exhibits this trait, although both are prone to burning when in the sun for a short period of time. As the child grows, he is found to be at average height and weight for his age, and is progressing normally along the developmental guidelines. He is, however, kept inside at all times, and is carefully wrapped if he has to leave the house. Fibroblasts isolated from this child are grown in culture, and in an experiment, exposed to UV light. An analysis of the fibroblast DNA will demonstrate which one of the following?

(A) A preponderance of apurinic sites and apyrimidinic sites

(B) An increase in sister chromatid exchange rate

(c) A preponderance of abnormal base pairs in the DNA
(d) Loss of telomeres within the DNA

(E) An increase in cross-linked bases within the strands of DNA

A

the answer is E.

The child has XP, a defect in nucleotide excision repair such that thymine dimers, created by exposure to UV light, cannot be removed from the DNA. XP will not affect the repair of apurinic or apyrimidinic sites (sites missing just the base from DNA, which requires the AP endonuclease for repair). An increase in sister chromatid exchange rates is a finding in Bloom’s syndrome, which is a defect in a helicase required for both DNA and RNA syntheses. Patients with Bloom’s syndrome are small for their age, unlike those with XP who follow normal developmental milestones. XP does not result in unusual base pairs in DNA, rather the formation of thymine dimers between the adjacent T residues in one strand of DNA. These T residues are still complementary to the A residues in the other strand. XP does not affect the ability of telomerase to extend the ends of the linear chromosomes in the cell.

57
Q

A 50-year-old male with a “pot belly” and a strong family history of heart attacks is going to his physician for advice on how to lose weight. He weighs 220 lb (100 kg) and is about 6’ tall (1.85 m). His lifestyle can be best described as sedentary.

For which of the following disease processes is this patient at higher risk?

(A) Diabetes mellitus, type 1

(B) Insulin resistance syndrome

(C) Gaucher disease

(D) Low blood pressure

(E) Sickle cell disease

A

The answer is B.

The patient’s weight, age, and activity put him at higher risk for insulin resistance syndrome. The entire syndrome includes hypertension, diabetes mellitus (type 2), decreased high-density lipoprotein levels, increased triglyceride levels, increased urate, increased levels of plasminogen activator inhibitor 1, nonalcoholic fatty liver, central obesity, and polycystic ovary syndrome (PCOS) (in females). Insulin resistance syndrome leads to early atherosclerosis throughout the entire body. The patient is not at increased risk for diabetes mellitus, type 1, as that is the result of an autoimmune condition that destroys the β cells of the pancreas such that insulin can no longer be produced. The lifestyle exhibited by the patient has not been linked to autoimmune disorders. Gaucher disease is a disorder of the enzyme β-glucocerebrosidase, and is an autosomal recessive disorder. Since this disease is an inherited disorder, the patient’s lifestyle does not increase his risk of having this disease. The patient’s increasing weight might lead to increased blood pressure, but not to reduced blood pressure. Sickle cell disease is another autosomal recessive disorder leading to an altered β-globin gene product, and like Gaucher disease, it is an inherited disorder that is not altered by the patient’s lifestyle

58
Q

A family, while on a picnic, picked some wild mushrooms to add to their picnic salad. Shortly thereafter, all the members of the family became ill, with the youngest child showing the most severe symptoms. The family is suffering these effects owing to a primary inability to accomplish which one of the following in their cells and tissues?

(A) Synthesize proteins

(B) Synthesize lipids

(c) Synthesize DNA
(d) Synthesize carbohydrates

(E) Repair damage in DNA

A

the answer is A.

The poison in poisonous mushrooms is α-amanitin, an inhibitor of eukaryotic RNA polymerases, primarily RNA polymerase II. As the family ate the mushrooms containing the poison, RNA polymerase II stopped functioning, and mRNA was no longer produced. This led to a lack of protein synthesis. There is no direct effect on the synthesis of lipids, carbohydrate, or DNA, other than replacing the required enzymes due to protein turnover. However, the net effect of α-amanitin poisoning would be to stop protein synthesis, which may then lead to a cessation of lipid or DNA synthesis. α-Amanitin has no direct effect on DNA repair.

59
Q

A 42-year-old woman has slowly developed an inability to keep her eyes open at the end of the day. The eyelids droop, despite her best efforts to keep them open. This does not occur first thing in the morning. Further examination shows a generalized muscle weakness as the day progresses.

A drug that may help to stabilize this condition would do which one of the following?

(A) Stimulate the production of immune cells

(B) Stimulate the production of epinephrine

(C) Inhibit the production of acetylcholine

(D) Inhibit acetylcholinesterase

(E) Stimulate catechol-O-transferase

A

The answer is D.

The woman has myasthenia gravis, which is due to autoantibodies directed against the acetylcholine receptor. As such, acetylcholine stimulation of muscle cells is decreased, owing to a reduced number of functional acetylcholine receptors at the neuromuscular junction. One way to treat this condition is to inhibit acetylcholinesterase, the enzyme that degrades acetylcholine at the neuromuscular junction. By keeping the levels of acetylcholine high at the junction, there is a greater probability that the receptors that are active are occupied, and the signal from the neuron can be transmitted. Inhibiting the production of acetylcholine would exacerbate the problem, as would stimulating the production of immune cells (more autoantibodies would potentially be generated). Epinephrine is not involved at the neuromuscular junction, and stimulation of catechol-O-transferase is a mechanism to inhibit the action of catecholamines in nonneuronal tissues, and does not contribute to the progression of myasthenia gravis

60
Q

A 28-year-old female presents with fluctuating fatigue, drooping of her eyelids, difficulty swallowing, and slurred speech. The patient is given a drug that affects an enzyme’s activity, and kinetic analysis of the enzyme-catalyzed reaction, in the presence and absence of the drug, is shown below. The effect of this medication can best be described by which set of terms below?

A

the answer is A.

The patient has myasthenia gravis, and the treatment is pyridostigmine, a competitive, reversible inhibitor of acetylcholinesterase. Myasthenia gravis is caused by autoantibodies to the acetylcholine receptor, reducing the effectiveness of acetylcholine at the neuromuscular junction. By reversibly inhibiting acetylcholinesterase, the effective levels of acetylcholine are increased, thereby providing sufficient acetylcholine to bind to the few functional receptors that remain. The graph is classic for a competitive inhibitor. Competitive inhibitors display an increased apparent Km, and a constant Vmax.

61
Q

A young woman (5’ 3” tall, 1.6 m) who has a sedentary job and does not exercise consulted a physician about her weight, which was 110 lb (50 kg). A dietary history indicates that she eats approximately 100 g of carbohydrate, 20 g of protein, and 40 g of fat daily.

According to the woman’s BMI, into what classification does her weight and height place her?

(A) Underweight

(B) Normal range

(C) Overweight (preobese)

(D) Class I obese range

(E) Class II obese range

A

The answer is B.

According to Table 1.2, a BMI of 19.5 places the woman at the lower end of the normal range. Underweight is indicated by a BMI of ,18.5; preobesity occurs above a BMI of 25, but ,30. Class I obesity is indicated by a BMI between 30 and 35, and class II obesity by a BMI between 35 and 40.

62
Q

Questions 118 to 121 are matching questions. A dietary deficiency of a vitamin can cause each of the conditions below. Match each condition with the appropriate vitamin. An answer may be used once, more than once, or not at all.

  1. Beriberi

(A) Vitamin C

(B) Niacin

(C) Vitamin D

(D) Biotin

(E) Thiamine

A
  1. The answer is E. Lack of thiamine (vitamin B1) in the diet causes beriberi. Scurvy is caused by lack of vitamin C. Pellagra is due to a dietary deficiency of niacin, and rickets from a lack of vitamin D
63
Q

An alcoholic presents with swelling and fissuring of the lips, cracking at the angles of the mouth, red eyes, and an oily, scaly rash of his scrotum.

Which one of the following cofactors of enzyme complexes would be most affected by this condition?

(A) The concentration of NAD+

(B) The concentration of NADP+

(C) The concentration of coenzyme Q

(D) The functioning of the FMN components of complex I

(E) The functioning of the cytochrome- containing components of complex III

A

The answer is D.

This patient has vitamin B2 (riboflavin) deficiency, ariboflavinosis, as indicated by the symptoms displayed by him. Both FAD and FMN require vitamin B2 to be produced. NAD+ and NADP+ are derived from niacin. Coenzyme Q is derived from acetyl-CoA, and vitamin B2 is not needed in the synthesis of the heme ring, which is derived from succinylCoA and glycine

64
Q

Vitamin B12 deficiency

(A) Megaloblastic anemia

(B) Hypochromic, microcytic anemia

(C) Hemolytic anemia

(D) Sickle cell anemia

A

The answer is A.

A vitamin B12 deficiency results in a megaloblastic anemia plus demyelination of nerves, due to reduced levels of SAM in the nervous system. These cells are large because the vitamin deficiency interferes with DNA synthesis, and the cells double in size without being able to replicate their DNA. Once the anemia begins, the large blast cells are released by the marrow in an attempt to control the anemia. A hypochromic, microcytic anemia can result from the lack of iron, or lack of pyridoxal phosphate. Both conditions lead to a reduction in the synthesis of heme, so the red cells cannot carry as much oxygen (which gives them the pale color). The cells are small in order to maximize the concentration of hemoglobin present in the cells. Hemolytic anemia occurs when the red cell membrane fragments, which can occur with pyruvate kinase deficiencies or a lack of glucose-6-phosphate dehydrogenase activity (which results in reduced NADPH levels). Sickle cell anemia is caused by a point mutation in the β-globin gene, substituting a valine for a glutamic acid.

65
Q

A 43-year-old female has been on a “grapefruit and potatoes” diet for several months in an effort to lose weight. She now complains of a rash covering most of her body, a large, beefy tongue, nausea and diarrhea, and some confusion.

To reverse the symptoms described in the patient, a diet high in which one of the following should be recommended?

(A) Green, leafy vegetables

(B) Whole grains and meat

(C) Citrus fruits

(D) Orange and yellow vegetables

(E) Chocolate cake

A

The answer is B.

While green, leafy vegetables are rich in other B vitamins, whole grains, meats, fish, and liver are the best sources of niacin. Citrus fruits are high in vitamin C. Orange and yellow vegetables are high in vitamin A. Chocolate cake is high in flavonoids, an antioxidant, fats, and carbohydrates.

66
Q

Ehlers-Danlos syndrome

(A) Glycogen

(B) Collagen

(C) Dopamine

(D) Valine

(E) A sphingolipid

A

The answer is B. A defect in the synthesis or processing of collagen will lead to a variety of diseases, of which Ehlers2Danlos syndrome is one (osteogenesis imperfecta is another).

67
Q

Which would be higher in the blood of a person with a galactose-1-phosphate uridyltransferase deficiency than in a normal person?

(A) Glucose

(B) Galactose

(C) Fructose

(D) Glucose and galactose

(E) Glucose, galactose, and fructose

A

The answer is B.

Galactose would be higher, because in classic galactosemia (uridyltransferase deficiency), galactose can be phosphorylated but it cannot be metabolized further. Galactose-1-phosphate and its precursor, galactose, increase. This disorder would not affect glucose or fructose levels in the blood

68
Q

An alcoholic presents with swelling and fissuring of the lips, cracking at the angles of the mouth, red eyes, and an oily, scaly rash of his scrotum.

Which of the following foods would best help reverse the symptoms described in the above patient?

(A) Broccoli

(B) Carrots

(C) Grapefruits

(D) Wheat

(E) Chocolate cake

A

The answer is A.

Dark green vegetables, especially broccoli, meats, and dairy products are all high in riboflavin. Carrots are high in vitamin A, grapefruits in vitamin C, and whole grains in niacin. Chocolate cake is high in flavonoids, an antioxidant, fats, and carbohydrates.

69
Q

A 28-year-old man presents to the ER with a large amount of blood and protein in his urine. He has had a sensorineural hearing loss since his teen years and has misshaped lenses (anterior lenticonus). The physician is suspicious of a genetic disorder that may lead to eventual kidney failure. If this is the case, the patient most likely has a mutation in which one of the following proteins?

(A) Spectrin

(B) α1-Antitrypsin

(c) Collagen
(d) Fibrillin

(E) β-Myosin heavy chain

A

the answer is c.

The patient has Alport syndrome, a mutation in type IV collagen that alters the basement membrane composition of kidney glomeruli. In the absence of a functional basement membrane, the kidneys have difficulty in properly filtering waste products from blood into the urine, and both blood and proteins can enter the urine. Type IV collagen is also important for hearing (it is found in the inner ear) and for the eye. Type IV collagen forms a meshlike structure, which is different from the rodlike structures found in type I collagen, and is found in almost all basement membrane structures. Given sufficient time, the alteration in the basement membrane in the glomeruli will lead to their destruction, and loss of kidney function. A mutation in α1-antitrypsin will lead to emphysema, mutations in spectrin can lead to hereditary spherocytosis, mutations in fibrillin lead to Marfan syndrome, and mutations in β-myosin heavy chain can lead to FHC.

70
Q

Questions 118 to 121 are matching questions. A dietary deficiency of a vitamin can cause each of the conditions below. Match each condition with the appropriate vitamin. An answer may be used once, more than once, or not at all.

  1. Beriberi

(A) Vitamin C

(B) Niacin

(C) Vitamin D

(D) Biotin

(E) Thiamine

A
  1. The answer is E. Lack of thiamine (vitamin B1) in the diet causes beriberi. Scurvy is caused by lack of vitamin C. Pellagra is due to a dietary deficiency of niacin, and rickets from a lack of vitamin D