BIOLOGY | Unit 3 AOS 2: Biochemical pathways Flashcards

Biology

1
Q

Anabolic reactions

A
  • Building up molecules
  • Needs energy
  • Endothermic
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2
Q

Catabolic reactions

A
  • Breaking down molecules
  • Releases energy
  • Exothermic
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3
Q

Why are enzymes beneficial to cells?

A

1) They speed up biochemical reactions.
2) They lower activation energy.

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4
Q

Active site

A

Where the substrate binds to the enzyme. It orientates the substrate into the correct position for the reaction to take place.

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5
Q

Where does the substrate bind?

A

The active site of the enzyme.

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6
Q

Substrate

A

The molecule that an enzyme binds to.

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7
Q

Product

A

The final molecule made by the enzyme.

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8
Q

3 factors that effect enzyme function?

A

1) temperature
2) pH
3) concentration

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9
Q

Optimal temperature

A

The temperature at which the enzyme works best.

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10
Q

Denaturation

A

Occurs when enzymes are moved out of their optimum range. It is irreversible and causes the bonds holding the enzymes together to break, causing a change in protein structure/shape.

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11
Q

What happens when the proteins are heated past their optimal temperature?

A

They undergo denaturation.

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12
Q

What happens when proteins are at a temperature too low?

A

Enzymes slow down and stop functioning (this is reversible and not denaturation)

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13
Q

What is the effect of pH?

A

Changes in pH can alter a protein’s shape, especially its active site, affecting its function. Each enzyme has an optimal pH range, and if it moves outside this range, the enzyme can denature and lose its ability to work.

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14
Q

What are enzymes?

A

Organic catalysts that often influence entire biochemical pathways.

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15
Q

Competitive inhibitor

A

Able to bind to the enzyme at the active site but doesn’t trigger a reaction. This blocks the substrate from being able to bind to the active site.

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16
Q

Non-competitor inhibitor

A

Will bind to the enzyme at the allosteric site (site other than active site) which causes the shape of the enzyme to change so the substrate can no longer fit.

17
Q

Reversible inhibitors

A

Form weak bonds with enzymes which can break. They slow but don’t stop the rate of reaction.

18
Q

Irreversible inhibitors

A

Form strong bonds with enzymes, resulting in that enzyme being unable to catalyse reactions indefinitely. These are mostly competitive inhibitors.

19
Q

Are non-competitive inhibitors affected by substrate concentration?

20
Q

How are competitive inhibitors overcome?

A

By increasing the substrate concentration.

21
Q

What is photosynthesis?

A

The process of synthesising glucose from carbon dioxide and water in the presence of sunlight.

22
Q

Why is photosynthesis a biochemical pathway?

A
  • A series of reactions
  • Catalysed by enzymes and typically involves coenzymes
  • The reactions can take place in different cellular locations
  • Outputs if one reaction can be inputs for another reaction
23
Q

Coenzymes

A

Non-protein molecules that assist enzyme function. They are cycles in reactions by being built up in one reaction and broken down in another.

24
Q

What does ADP + Pi create?

25
What does NADP+ become?
NADPH
26
What does FAD become?
FADH₂
27
What is ATP's role?
Provides energy for these reactions.
28
Role of NADPH, NADH, FADH₂
Carry H+ and electrons from one reaction to another, where they are needed.
29
Goal of the Light Dependent stage
To build up coenzymes ATP and NADPH which are needed in the light-dependent stage.
30
Where does the LD stage occur?
Thylakoid
31
What are the inputs and outputs of the LD stage?
Water ➔ Oxygen (light splits the water) NADP+ ➔ NADPH (hydrogen taken from water) ADP + Pi ➔ ATP
32
Goal of the Light Independent stage
Brings CO2 into a series of reactions (Calvin cycle) to produce Glucose. Enzymes, ATP and NADPH power these reactions.
33
Where does the LI stage occur?
Stroma
34
What are the inputs and outputs of the LI stage?
Carbon dioxide ➔ Glucose (through Calvin cycle) NADPH ➔ NADP+ ATP ➔ ADP + water
35
C4 plants
- Divide the light-independent phases into two cell types (mesophyll and bundle sheath cells)
36
CAM plants
- Divide the light-independent phase over time (night and day) - They close their stomata during the day and open it at night to avoid water loss.
37
What do C4 ad CAM have in common?
Both these plants complete carbon fixation with different enzymes from Rubisco called PEP carboxylase. This enzyme is not susceptible to photorespiration.
38
Rubisco
An enzyme that plays an important role in the light-independent reactions of photosynthesis.