Biological molecules proteins 2.1.2 Flashcards
What are peptides?
- Peptides are polymers made up of amino acid molecules. Proteins consist of one or more polypeptides arranged as complex macromolecules and they have specific biological functions.
What elements do proteins contain?
Carbon, hydrogen, oxygen, nitrogen, sulphur. (CHONS)
What is a gene?
- A gene is a stretch of DNA that codes for proteins.
- DNA is NOT made out of proteins
What are the monomers of proteins?
amino acids
How many amino acids are there within proteins in nature?
- There are 20 aas within proteins in nature
- Plants and microorganisms can synthesise all of these amino acids
- Animals can only synthesise non essential amino acids.
Structure of amino acids
*look on pp
Condensation reaction of 2 amino acids
*look on pp
What is the Buiret test?
The biuret test is used to test for proteins. Firstly, a sample of the solution is placed
in a test tube and subsequently an equal amount of NaOH is added. Afterwards, a few drops of dilute copper (II) sulfate solution is added and gently mixed. In the presence of a protein, the solution turns lilac/ as an indicator of peptide bonds. In the absence of protein, the solution remains blue
How to find rf value
distance travelled by solute / distance travelled by solvent
What is the purpose of chromatography?
Chromatography is used to seperate a mixture of solutes disolved in a solvent. This allows identification of the solutes in the mixture using retention factors (Rf)
What are the 2 types of chromatography?
- Paper chromatography, uses chromatography paper.
- Thin layer chromatography (TLC0 uses an inert surface (glass, metal or plastic) which is coated with material such assilica gel or cellulose.
The process of chromatography
- A spot of the mixture is placed near the bottom of a piece of chromatography paper/plate
- The paper/plate is then placed upright in a suitable solvent
- As the solvent moves up the paper or plate it carries the mixture with it.
What are the 2 phases of chromatography?
- The mobile phase = the solvent
- The stationary phase = the paper or plate that the solvent moves up
Why do solutes move at different rates?
- Solubility in the mobile phase.
The more soluble the compound is in the solvent, the further it will travel.
Hydrophilic compounds travel faster in water, hydrophobic compounds travel faster in organic solvents. - Adsorption by the stationary phase
Adsorption = attraction of the chemical component to the surface of the stationary phase. The higher the rate of adsorption, the slower rate of movement.
What is a retention factor?
The retention factor of a particular material in a particular solvent is the ratio of the distance the spot moved above the origin to the distance the solvent front moved above the origin. Retention factors are always less than 1.
Seperating amino acids using thin layer chromatography
- A technique used to seperate the individual components of a mixture.
- The rate at which amino acids in the organic solvent move through the silica gel depends on the interactions (hydrogen bonds) they have with the silica in the stationary phase.